Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119356319

Identifier: 119356319

GI number: 119356319

Start: 530847

End: 531710

Strand: Direct

Name: 119356319

Synonym: Cpha266_0482

Alternate gene names: NA

Gene position: 530847-531710 (Clockwise)

Preceding gene: 119356318

Following gene: 119356320

Centisome position: 16.94

GC content: 48.73

Gene sequence:

>864_bases
ATGGATATAAAGAGGGCAGCCGTTTATATCGATGGCGCGAATTTGTTTTTTACTCAGCGAAGTCTTGGCTGGCAGATTGA
TTTTTCACGGTTGATCACTTTTTTTCTTGACAGATATGCTTCGGTTGAGGCGAGGTATTATGTGCCTGTTTCCGAGCCGG
CTTCCGAGGAGCAGGCGGCCTTTACAAGAGTTCTTGCCGCACACGGCTATATCCTGACATCAAAACCGGTCAAGAAGATT
GTCAACAAGACTACGGGCGAAATAATCATCAAGGGTAATCTCGATGTTGAGCTTGCTGTCGATGCGCTGGTTGGAGAGAT
TGCCTATGATACGTTTATTCTTTTCAGCGGAGACAGCGATTTTTTACCTCTCCTGCGGGCCTTGAAAGAGAAAGGTAAAG
AGGTTTTGGTTTATTCCACAGAGGGAATCAGCGCATGGGAGCTTCTTATTGAGCCCGGCATTGATTTTCACGACCTCGCC
GGCCTGAGGGATCGCATAGGCCACGCTAAACCCGGAGAGGGGGGGCGCAGGGAAACAGGCGGGCAGGCGCTTCAGCAGGA
AAACGCGTTTTTGCGGTTGCCGGTTGTTGGCGAGGTGTTTACCGGAACGGTTCTTTCGGTGAAATCCTATGGAGTTTTTC
TTGCCAACACCTATCATGCCAAATGCCTTCTTCCTCTCAGTTTTCTCGGGATTTCCAGGCATATCACTGATTTAACGGAG
GTTGTGCGTATGGCGGATGTGTTTGATGTTGTTGTCTTCAAGGTGGATACATCTCATGAAGTGCCAGAGATAACGGTCAA
GCTTGCTGACAAGGAGAAGTCTCATGAACTCTCTGAAAGAGTTGCCGGTTCGCCATTATCTTGA

Upstream 100 bases:

>100_bases
GAACGAAAAGAGGGCTTCCTGACGTTTAATTACAGGGAATATGATTTTATCTGAACCAGAAGATGGAGATTGGCGTGGTG
TATGAACAGAGGGAGAAAAG

Downstream 100 bases:

>100_bases
GCGAACGTGTATCGGGAAGGCTGGCGTATGATGATGGTTGTGCATGTTTACCTGAGGTTTTTTATGCTTGTAATACATAA
AGGAGCAGTATGGATATGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTRVLAAHGYILTSKPVKKI
VNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSDFLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLA
GLRDRIGHAKPGEGGRRETGGQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE
VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS

Sequences:

>Translated_287_residues
MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTRVLAAHGYILTSKPVKKI
VNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSDFLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLA
GLRDRIGHAKPGEGGRRETGGQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE
VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS
>Mature_287_residues
MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTRVLAAHGYILTSKPVKKI
VNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSDFLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLA
GLRDRIGHAKPGEGGRRETGGQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE
VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31708; Mature: 31708

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA
CCCCEEEEEEECCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD
HHHHHHHCCEEEECHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHEEEEEEECCCC
FLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLAGLRDRIGHAKPGEGGRRETG
HHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
GQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE
CHHHHHCCCEEEECEECHHHCCEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH
VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS
HHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIKRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA
CCCCEEEEEEECCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHH
FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD
HHHHHHHCCEEEECHHHHHHHCCCCCCEEEECCCCEEEHHHHHHHHHHHEEEEEEECCCC
FLPLLRALKEKGKEVLVYSTEGISAWELLIEPGIDFHDLAGLRDRIGHAKPGEGGRRETG
HHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
GQALQQENAFLRLPVVGEVFTGTVLSVKSYGVFLANTYHAKCLLPLSFLGISRHITDLTE
CHHHHHCCCEEEECEECHHHCCEEEEEECCCEEEEECCCCEEEHHHHHHHHHHHHHHHHH
VVRMADVFDVVVFKVDTSHEVPEITVKLADKEKSHELSERVAGSPLS
HHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA