| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356311
Identifier: 119356311
GI number: 119356311
Start: 522244
End: 523782
Strand: Direct
Name: 119356311
Synonym: Cpha266_0474
Alternate gene names: NA
Gene position: 522244-523782 (Clockwise)
Preceding gene: 119356310
Following gene: 119356312
Centisome position: 16.66
GC content: 49.71
Gene sequence:
>1539_bases ATGTCATCACTGCTTCTTCAGATAAAAGAGTCCTATCCGATGGTGTATGAGGCGTTCAGCGCGTTGCCTGACGGTGAGCG GCATCTGCGGGGTATTATGGAGCTTGACCGATACTGGGAGCATCTTCATCAGCCGGTTCCCGAAGTCGTTAAGCCCGGAT CGGAACTTCCGGAGGGTGTTGAGGTGAATGGTGATTTCGATCTGATCTATGCAGGTGGAACGCTCAGCCTTCTGCATGCT GCCGTGATGGCCAGGCAGTATGACCGCAAGGTGCTGGTTTTTGATCGTCATACTCCGGCTCAATCGACTCGCGACTGGAA TATATCCCGAGGAGAGCTGTTGAAACTTGCTGATACCGGGGTATTTTCCCTTTCAGAGCTTGAATCGGTTATTTTACGAG CCTATAAAACTGGCTGGGTCGAGTTTTACAAACCTGACGGCAGCCAGAAACGTCTCTATATCCGGAATGTGCTTGATTGT GCCGTTGATGCAGATCTTCTGCTGTCGATGGCAAGGGAGGTTGTTCTTTCAATGCCTGAAAACAGGGTGCTTTCGCAGAC ATCCTTTACAGCATGTTATCGCTTTGCCGACCATATTGTTGTTGAGGTTACCGATAGCGAGGGGAAATCGTACCATTACC GGGGAAAGGTTCTTGTTGACATGATGGGTGTTCGTTCTCCTGTGGCAATGCAGCTGAACGAAGGGGCTCCGCAAACCCAT GTGTGTCCGACGGTGGGTACGATAGCAAGCGGGTTTATGGACGCCGATTTCGACACAGGGGAGATTCTTGCAAGTATTGC GCCTGCCGATATCGCTTCAGGAACGGGAAAGCAGTTTATCTGGGAGGGGTTTCCGGCTAAAGGCAGCGAGTATATCACCT ATCTGTTTTTTTACGATGAGGTCGATTCACAAAATGACAAGTCCCTGCTGGGACTGTTTGAAACCTATTTCAGAACGCTT CCGGAATACAAGAAAATCGGACCTGATTTCAGCATTCATCGTCCGGTATATGGTATTATCCCGGCATATTTTCATGACGG GTTCAGCCGAACAAGGGAGATTGCCGATGACCGGATCATTTTATTCGGTGATGCAGCATCTCTTGGCTCTCCCCTGACCT TCTGCGGTTTCGGCTCTCTGGTGCGCAATCTTCACCATCTTACGGCGGACCTTGATCTGGCACTCGACAGCAATGCGCTT TCAAAAAAGGACCTTGAAAAAATCAGTGCTTATGAGCCCAATGTCGCATCCATGGCCAATCTCATGAAGTACATGTGTTT CAATGCCGAGACTGATGAGCCGAATTTCGTCAACGACCTCATGAATGAGGTGATGGTGGTGCTCGATGAGCTTCCCGAAC GCTATCGTCAGGCTATGTTTCGGGATGAAATGAAGATTGAGGAGCTTGTTGTGGTTATGTTGCGTGTCGCATGGCGATAC CCAAAGGTTCTTAAGGCAACCTGGGATAAGCTTGGCGTTGCCGGTTCGACGGGTTTTTTGAAAAATCTCGTCGGCTGGGT CTTCTCTTCAGCCAGATAA
Upstream 100 bases:
>100_bases GGTTATGGCTGGGCGTTCTTGAGTATTCCTGTGCGGGTATAGCCCGCTTGATAAAAGAGGTTTGGCGTTACTCTTTTTTT TGAAATTCAATGTTTTTTGC
Downstream 100 bases:
>100_bases CTCTTCATATCATTCGTCATGAGCGATGCCGTCAATGTCCGCAAGGCTATAGAAGAACTACGCAGGGAGATCAACAGGCA CAATACGCTCTACTATGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSSLLLQIKESYPMVYEAFSALPDGERHLRGIMELDRYWEHLHQPVPEVVKPGSELPEGVEVNGDFDLIYAGGTLSLLHA AVMARQYDRKVLVFDRHTPAQSTRDWNISRGELLKLADTGVFSLSELESVILRAYKTGWVEFYKPDGSQKRLYIRNVLDC AVDADLLLSMAREVVLSMPENRVLSQTSFTACYRFADHIVVEVTDSEGKSYHYRGKVLVDMMGVRSPVAMQLNEGAPQTH VCPTVGTIASGFMDADFDTGEILASIAPADIASGTGKQFIWEGFPAKGSEYITYLFFYDEVDSQNDKSLLGLFETYFRTL PEYKKIGPDFSIHRPVYGIIPAYFHDGFSRTREIADDRIILFGDAASLGSPLTFCGFGSLVRNLHHLTADLDLALDSNAL SKKDLEKISAYEPNVASMANLMKYMCFNAETDEPNFVNDLMNEVMVVLDELPERYRQAMFRDEMKIEELVVVMLRVAWRY PKVLKATWDKLGVAGSTGFLKNLVGWVFSSAR
Sequences:
>Translated_512_residues MSSLLLQIKESYPMVYEAFSALPDGERHLRGIMELDRYWEHLHQPVPEVVKPGSELPEGVEVNGDFDLIYAGGTLSLLHA AVMARQYDRKVLVFDRHTPAQSTRDWNISRGELLKLADTGVFSLSELESVILRAYKTGWVEFYKPDGSQKRLYIRNVLDC AVDADLLLSMAREVVLSMPENRVLSQTSFTACYRFADHIVVEVTDSEGKSYHYRGKVLVDMMGVRSPVAMQLNEGAPQTH VCPTVGTIASGFMDADFDTGEILASIAPADIASGTGKQFIWEGFPAKGSEYITYLFFYDEVDSQNDKSLLGLFETYFRTL PEYKKIGPDFSIHRPVYGIIPAYFHDGFSRTREIADDRIILFGDAASLGSPLTFCGFGSLVRNLHHLTADLDLALDSNAL SKKDLEKISAYEPNVASMANLMKYMCFNAETDEPNFVNDLMNEVMVVLDELPERYRQAMFRDEMKIEELVVVMLRVAWRY PKVLKATWDKLGVAGSTGFLKNLVGWVFSSAR >Mature_511_residues SSLLLQIKESYPMVYEAFSALPDGERHLRGIMELDRYWEHLHQPVPEVVKPGSELPEGVEVNGDFDLIYAGGTLSLLHAA VMARQYDRKVLVFDRHTPAQSTRDWNISRGELLKLADTGVFSLSELESVILRAYKTGWVEFYKPDGSQKRLYIRNVLDCA VDADLLLSMAREVVLSMPENRVLSQTSFTACYRFADHIVVEVTDSEGKSYHYRGKVLVDMMGVRSPVAMQLNEGAPQTHV CPTVGTIASGFMDADFDTGEILASIAPADIASGTGKQFIWEGFPAKGSEYITYLFFYDEVDSQNDKSLLGLFETYFRTLP EYKKIGPDFSIHRPVYGIIPAYFHDGFSRTREIADDRIILFGDAASLGSPLTFCGFGSLVRNLHHLTADLDLALDSNALS KKDLEKISAYEPNVASMANLMKYMCFNAETDEPNFVNDLMNEVMVVLDELPERYRQAMFRDEMKIEELVVVMLRVAWRYP KVLKATWDKLGVAGSTGFLKNLVGWVFSSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57634; Mature: 57503
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLLQIKESYPMVYEAFSALPDGERHLRGIMELDRYWEHLHQPVPEVVKPGSELPEGV CCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCE EVNGDFDLIYAGGTLSLLHAAVMARQYDRKVLVFDRHTPAQSTRDWNISRGELLKLADTG EECCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCC VFSLSELESVILRAYKTGWVEFYKPDGSQKRLYIRNVLDCAVDADLLLSMAREVVLSMPE CCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCC NRVLSQTSFTACYRFADHIVVEVTDSEGKSYHYRGKVLVDMMGVRSPVAMQLNEGAPQTH CHHHHHHHHHHHHHHHCEEEEEEECCCCCEEEECCEEEEEHHCCCCCCEEEECCCCCCCC VCPTVGTIASGFMDADFDTGEILASIAPADIASGTGKQFIWEGFPAKGSEYITYLFFYDE CCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHCCCCCCCCEECCCCCCCCCEEEEEEEEEC VDSQNDKSLLGLFETYFRTLPEYKKIGPDFSIHRPVYGIIPAYFHDGFSRTREIADDRII CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE LFGDAASLGSPLTFCGFGSLVRNLHHLTADLDLALDSNALSKKDLEKISAYEPNVASMAN EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCHHHHHH LMKYMCFNAETDEPNFVNDLMNEVMVVLDELPERYRQAMFRDEMKIEELVVVMLRVAWRY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKVLKATWDKLGVAGSTGFLKNLVGWVFSSAR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SSLLLQIKESYPMVYEAFSALPDGERHLRGIMELDRYWEHLHQPVPEVVKPGSELPEGV CCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCE EVNGDFDLIYAGGTLSLLHAAVMARQYDRKVLVFDRHTPAQSTRDWNISRGELLKLADTG EECCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCC VFSLSELESVILRAYKTGWVEFYKPDGSQKRLYIRNVLDCAVDADLLLSMAREVVLSMPE CCCHHHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHCCC NRVLSQTSFTACYRFADHIVVEVTDSEGKSYHYRGKVLVDMMGVRSPVAMQLNEGAPQTH CHHHHHHHHHHHHHHHCEEEEEEECCCCCEEEECCEEEEEHHCCCCCCEEEECCCCCCCC VCPTVGTIASGFMDADFDTGEILASIAPADIASGTGKQFIWEGFPAKGSEYITYLFFYDE CCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHCCCCCCCCEECCCCCCCCCEEEEEEEEEC VDSQNDKSLLGLFETYFRTLPEYKKIGPDFSIHRPVYGIIPAYFHDGFSRTREIADDRII CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE LFGDAASLGSPLTFCGFGSLVRNLHHLTADLDLALDSNALSKKDLEKISAYEPNVASMAN EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCCCHHHHHH LMKYMCFNAETDEPNFVNDLMNEVMVVLDELPERYRQAMFRDEMKIEELVVVMLRVAWRY HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKVLKATWDKLGVAGSTGFLKNLVGWVFSSAR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA