| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is resA [H]
Identifier: 119356306
GI number: 119356306
Start: 519388
End: 519960
Strand: Direct
Name: resA [H]
Synonym: Cpha266_0469
Alternate gene names: 119356306
Gene position: 519388-519960 (Clockwise)
Preceding gene: 119356305
Following gene: 119356310
Centisome position: 16.57
GC content: 49.91
Gene sequence:
>573_bases ATGATAAAACAGTTTGGGGTTATGATACCTTCAAGAACAGTAGCGTTTGCTCTCTGTATAGCCCTTTGTACTGTTATCTG TCAACCACTCCTGGCGGGAGCGGCTGAAAAGAGAGACAAAGCGGCATTGAAGGTTACTTCTGCTCCGGGGTTCGCTGCCA GATCGGTGCAAGGCGCTCCGATTTCAAGCGACAAGCTCAGGGGAAAGGCATACATTGTGAATTTTTTCGGTTCCTGGTGC CCTGTCTGCCGCAAGGAACTTCCTGATATGGTTGCTCTGCAGGAGAAGTACGAGAAAAAAGGGTTTACCTTTATCGGTAT GGCATACAAGGACAACGCACAGAGCCTGCCTGATTTTATCTGGGAACACAGCATCAATTACCCTGTCGTCGTGGCCGATC AGACAATTGTTACGGCTTTTGGCCGTCAGATTTCAGGCGGGTTGAGGGCTGTTCCCGCATTGTTTGCCGTGAACAGCGAG GGAAAACTGCTTTCGGTTGTTGTCGGCGCCCAGAGCAAAGCGGCATTTGAAGAGCTGATACTCAATACGCTCGCTTCGGG AAAAAAGAAGTAG
Upstream 100 bases:
>100_bases AAAACCATCGAAATCAGAAAAATCATTGCCCCGGTGCTGAAAAATATTGTTAATAATCCGGGGATGGATCTGTCGTGAAC GGCTTGTCCTGTTCAGTAAT
Downstream 100 bases:
>100_bases GACGTGGGAAGTGAGGGTGGCGGGAGTAGTTGTATCTGTAGAGGAGAGCGTTGAAAACAGATTTGTTTGTCATCACGAAC GCAGAACGGAATTCCCATCT
Product: redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MIKQFGVMIPSRTVAFALCIALCTVICQPLLAGAAEKRDKAALKVTSAPGFAARSVQGAPISSDKLRGKAYIVNFFGSWC PVCRKELPDMVALQEKYEKKGFTFIGMAYKDNAQSLPDFIWEHSINYPVVVADQTIVTAFGRQISGGLRAVPALFAVNSE GKLLSVVVGAQSKAAFEELILNTLASGKKK
Sequences:
>Translated_190_residues MIKQFGVMIPSRTVAFALCIALCTVICQPLLAGAAEKRDKAALKVTSAPGFAARSVQGAPISSDKLRGKAYIVNFFGSWC PVCRKELPDMVALQEKYEKKGFTFIGMAYKDNAQSLPDFIWEHSINYPVVVADQTIVTAFGRQISGGLRAVPALFAVNSE GKLLSVVVGAQSKAAFEELILNTLASGKKK >Mature_190_residues MIKQFGVMIPSRTVAFALCIALCTVICQPLLAGAAEKRDKAALKVTSAPGFAARSVQGAPISSDKLRGKAYIVNFFGSWC PVCRKELPDMVALQEKYEKKGFTFIGMAYKDNAQSLPDFIWEHSINYPVVVADQTIVTAFGRQISGGLRAVPALFAVNSE GKLLSVVVGAQSKAAFEELILNTLASGKKK
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 20446; Mature: 20446
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQFGVMIPSRTVAFALCIALCTVICQPLLAGAAEKRDKAALKVTSAPGFAARSVQGAP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHCCCCCCC ISSDKLRGKAYIVNFFGSWCPVCRKELPDMVALQEKYEKKGFTFIGMAYKDNAQSLPDFI CCCCHHCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH WEHSINYPVVVADQTIVTAFGRQISGGLRAVPALFAVNSEGKLLSVVVGAQSKAAFEELI HHCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHH LNTLASGKKK HHHHHCCCCC >Mature Secondary Structure MIKQFGVMIPSRTVAFALCIALCTVICQPLLAGAAEKRDKAALKVTSAPGFAARSVQGAP CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHCCCCCCC ISSDKLRGKAYIVNFFGSWCPVCRKELPDMVALQEKYEKKGFTFIGMAYKDNAQSLPDFI CCCCHHCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH WEHSINYPVVVADQTIVTAFGRQISGGLRAVPALFAVNSEGKLLSVVVGAQSKAAFEELI HHCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHEEECCCCCEEEEEECCCCHHHHHHHH LNTLASGKKK HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA