Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

Click here to switch to the map view.

The map label for this gene is 119356288

Identifier: 119356288

GI number: 119356288

Start: 497306

End: 497857

Strand: Direct

Name: 119356288

Synonym: Cpha266_0450

Alternate gene names: NA

Gene position: 497306-497857 (Clockwise)

Preceding gene: 119356287

Following gene: 119356289

Centisome position: 15.87

GC content: 47.83

Gene sequence:

>552_bases
ATGAAAAACAGTACAAAAGGCGGAAAAACCTTATCACGCTTGCTCTTTGTTCTCTCGTTTTTTTCTGCCGTTGCGCAGGC
GAAACCATCCGGAACTCTTTCAGAAACCGTCAGGGTGTCGGGTCTGGTTGAAAAGCCCTTCACCATTTCAACAACTTCAG
TCGGAACGATGAATGTTGCTGAACGGGAGAATACCGCCATTATTTGCGACTCGGGGCAAACCCGTAAAAGTCTGAAAAGC
TTCAGAGGAGTTCTCTTGCGCGATATTCTCGATTCAGCAAAAGTTGTTCTTTCCAATCCGGGACAGCGGGGAGAGTATTA
TGTCCTTGTCCGTTCGACCGACAACTATAATGTTCTTTTCTCGTACAATGAGCTTACCTATGGAACGGCAGGCGAGAGCA
CATGGCTGGTTTTTGAAGAGAACGGCAAACCGATTGACGATGATGGACGGTTTGTGGTGTTCTGTGCCAGCGACAGGGCG
ACCGGCCCCCGACATGTGAAATGGGTGAACGGTATCGAAGTTTCAAAAATAATCCTGCCTGTCTCCAATTAA

Upstream 100 bases:

>100_bases
ATCCTGCTGCTTATGGCAATATCGGAGGAGCTGGTTCGACCGGCACCTGTTTTTATGGTGGTTTGACCTTTACCCTGTAA
CAACTCAACAGCACGTTATC

Downstream 100 bases:

>100_bases
GGCGGATTGCATAATCATACTGCATATGCACAGATTCTATCTTTCGATTCTTCTTTTCGGCTTTTGCTTTCTGAAAACGG
AAATCCTCTTTGCCGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKNSTKGGKTLSRLLFVLSFFSAVAQAKPSGTLSETVRVSGLVEKPFTISTTSVGTMNVAERENTAIICDSGQTRKSLKS
FRGVLLRDILDSAKVVLSNPGQRGEYYVLVRSTDNYNVLFSYNELTYGTAGESTWLVFEENGKPIDDDGRFVVFCASDRA
TGPRHVKWVNGIEVSKIILPVSN

Sequences:

>Translated_183_residues
MKNSTKGGKTLSRLLFVLSFFSAVAQAKPSGTLSETVRVSGLVEKPFTISTTSVGTMNVAERENTAIICDSGQTRKSLKS
FRGVLLRDILDSAKVVLSNPGQRGEYYVLVRSTDNYNVLFSYNELTYGTAGESTWLVFEENGKPIDDDGRFVVFCASDRA
TGPRHVKWVNGIEVSKIILPVSN
>Mature_183_residues
MKNSTKGGKTLSRLLFVLSFFSAVAQAKPSGTLSETVRVSGLVEKPFTISTTSVGTMNVAERENTAIICDSGQTRKSLKS
FRGVLLRDILDSAKVVLSNPGQRGEYYVLVRSTDNYNVLFSYNELTYGTAGESTWLVFEENGKPIDDDGRFVVFCASDRA
TGPRHVKWVNGIEVSKIILPVSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20037; Mature: 20037

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSTKGGKTLSRLLFVLSFFSAVAQAKPSGTLSETVRVSGLVEKPFTISTTSVGTMNVA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCEEEEECCCCEEEEC
ERENTAIICDSGQTRKSLKSFRGVLLRDILDSAKVVLSNPGQRGEYYVLVRSTDNYNVLF
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCEEEEE
SYNELTYGTAGESTWLVFEENGKPIDDDGRFVVFCASDRATGPRHVKWVNGIEVSKIILP
EECCEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEEEEE
VSN
ECC
>Mature Secondary Structure
MKNSTKGGKTLSRLLFVLSFFSAVAQAKPSGTLSETVRVSGLVEKPFTISTTSVGTMNVA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCEEEEECCCCEEEEC
ERENTAIICDSGQTRKSLKSFRGVLLRDILDSAKVVLSNPGQRGEYYVLVRSTDNYNVLF
CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCEEEEE
SYNELTYGTAGESTWLVFEENGKPIDDDGRFVVFCASDRATGPRHVKWVNGIEVSKIILP
EECCEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEEEEEE
VSN
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA