| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is 119356287
Identifier: 119356287
GI number: 119356287
Start: 496581
End: 497285
Strand: Direct
Name: 119356287
Synonym: Cpha266_0449
Alternate gene names: NA
Gene position: 496581-497285 (Clockwise)
Preceding gene: 119356286
Following gene: 119356288
Centisome position: 15.85
GC content: 47.94
Gene sequence:
>705_bases ATGCAATCAGTCAACAGAAACGACAGCAAGAGCGATGTGCTTGCTCTCTGCGGTGCTGTGCCGATGCACCGCAAATCAAC CGGTAACGGTGTGCCGCTGCTGAAAAAAGGCGCCATCAATCTCTACATGAACATGCCTTGCCCGCTCAAGGTTGTGACCA AAATGGTAATCACCGAGTTTGCGGAGATCTACAATGCATCTCATGCCGTGCCGATCTATTCGCCGATGCTTCATGACGGC TATGTGAAAGATGGAAAAAATAACATTCCCGCATATGAGCTGCAAAATATCTCCAGAGCCATGACAAGGGGGATTGAATT GACAGCATCGATAAAGCTTCCCTATGGACTGACGGTTTCCGATGAATTGACCTTTCTTGATTCGGAAGATAAAAGCAAGG GGCAGGATCTGCTCTATGTTCCTGACGTGACGAATACGCTCAAACTTGCCTATGGCGCTGAACGCAGCGGCTTTAACGGC AATATCAGAGTGGTGAGTGTTGGAACGCAGTGGGTTGAAAACAATGTGAGGGCCGATGGTTATACGTTGGTCAACGCATA CCTGGCTAAAAAAGTCAGCAGCGATACATCGTTGTTTTTCGGTGTGGACAATATTTTCAATGAGGATCCTGCTGCTTATG GCAATATCGGAGGAGCTGGTTCGACCGGCACCTGTTTTTATGGTGGTTTGACCTTTACCCTGTAA
Upstream 100 bases:
>100_bases ACCATGAGCTGACGGAGAGCGAACTGCGGGAGGTGCTCGATCCTCACGCTGAACCGCTCCCTGAAAAAGGAGCGAGAACG AATAAATCTAAAGGATTATG
Downstream 100 bases:
>100_bases CAACTCAACAGCACGTTATCATGAAAAACAGTACAAAAGGCGGAAAAACCTTATCACGCTTGCTCTTTGTTCTCTCGTTT TTTTCTGCCGTTGCGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Receptor; NB-Dependent Outer Membrane Receptor For Fe3+/Colicin I
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MQSVNRNDSKSDVLALCGAVPMHRKSTGNGVPLLKKGAINLYMNMPCPLKVVTKMVITEFAEIYNASHAVPIYSPMLHDG YVKDGKNNIPAYELQNISRAMTRGIELTASIKLPYGLTVSDELTFLDSEDKSKGQDLLYVPDVTNTLKLAYGAERSGFNG NIRVVSVGTQWVENNVRADGYTLVNAYLAKKVSSDTSLFFGVDNIFNEDPAAYGNIGGAGSTGTCFYGGLTFTL
Sequences:
>Translated_234_residues MQSVNRNDSKSDVLALCGAVPMHRKSTGNGVPLLKKGAINLYMNMPCPLKVVTKMVITEFAEIYNASHAVPIYSPMLHDG YVKDGKNNIPAYELQNISRAMTRGIELTASIKLPYGLTVSDELTFLDSEDKSKGQDLLYVPDVTNTLKLAYGAERSGFNG NIRVVSVGTQWVENNVRADGYTLVNAYLAKKVSSDTSLFFGVDNIFNEDPAAYGNIGGAGSTGTCFYGGLTFTL >Mature_234_residues MQSVNRNDSKSDVLALCGAVPMHRKSTGNGVPLLKKGAINLYMNMPCPLKVVTKMVITEFAEIYNASHAVPIYSPMLHDG YVKDGKNNIPAYELQNISRAMTRGIELTASIKLPYGLTVSDELTFLDSEDKSKGQDLLYVPDVTNTLKLAYGAERSGFNG NIRVVSVGTQWVENNVRADGYTLVNAYLAKKVSSDTSLFFGVDNIFNEDPAAYGNIGGAGSTGTCFYGGLTFTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25341; Mature: 25341
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSVNRNDSKSDVLALCGAVPMHRKSTGNGVPLLKKGAINLYMNMPCPLKVVTKMVITEF CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHH AEIYNASHAVPIYSPMLHDGYVKDGKNNIPAYELQNISRAMTRGIELTASIKLPYGLTVS HHHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCEEC DELTFLDSEDKSKGQDLLYVPDVTNTLKLAYGAERSGFNGNIRVVSVGTQWVENNVRADG CCEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHCCCCCCC YTLVNAYLAKKVSSDTSLFFGVDNIFNEDPAAYGNIGGAGSTGTCFYGGLTFTL CHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEC >Mature Secondary Structure MQSVNRNDSKSDVLALCGAVPMHRKSTGNGVPLLKKGAINLYMNMPCPLKVVTKMVITEF CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHH AEIYNASHAVPIYSPMLHDGYVKDGKNNIPAYELQNISRAMTRGIELTASIKLPYGLTVS HHHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCEEC DELTFLDSEDKSKGQDLLYVPDVTNTLKLAYGAERSGFNGNIRVVSVGTQWVENNVRADG CCEEEECCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHCCCCCCC YTLVNAYLAKKVSSDTSLFFGVDNIFNEDPAAYGNIGGAGSTGTCFYGGLTFTL CHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA