| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is fabG [H]
Identifier: 119356273
GI number: 119356273
Start: 482133
End: 482882
Strand: Reverse
Name: fabG [H]
Synonym: Cpha266_0435
Alternate gene names: 119356273
Gene position: 482882-482133 (Counterclockwise)
Preceding gene: 119356274
Following gene: 119356272
Centisome position: 15.41
GC content: 46.27
Gene sequence:
>750_bases ATGACAGTATCAGGCAATAAAGTCTGTTTCATGACGGGCGCGACAGGAGGCCTTGGCAGCGAACTTGCCCTGTCAATCGC AAGACAGGGTTATTCGGTTTTCTTTACCTGGAATGCCTCCCGCCTTAAAGCGGAAAAAACGTTGGAAAAAATTCGAAGGA TAAGTCCTGAGTCGGATATGATCCGGTGCGATATTGCAAAACCGAAAGAGATACAACAGGCTTTTAACGCTTTTCTTGAG AAATTCAGTCGTCTTGACCTTCTTTTGGCAAGCGCTTCGAATTTTTACAGGACCGGCCTGCCTGATGTGAGTGAGACCGA GTGGGACAATCTTGTCGATACCAATCTGAAAGGCACTTTTTTTACGATGCAGGAGGCCGTCAAGATCATGCGAAATCAGT CTTTTGTGTCGAGAATCATTACCATGACCGATGTGTCGGCTGATCTTGTGTGGAGACACTTTGCGCCTTACACGGTTTCA AAGGCTGGTATCCAGCATCTGGTTAAAATTTTTGCCAGGGAATTTGCACCGCAAGTGCTTGTCAATGCTATCGCTCCCGG AACAATTACCAGTAACGCAGATTTGCAGCGTGACGAACACTCCGTTGAGGAAAAGAAACTGATCGAAAAAATTCCGCTGC AGCGACTTGGAAACCCCCTTGATATATCGAGGGCCGTTCTTTTTCTTCTTGAAAGCGACTATATCACCGGACAAATCATT TCAATCGATGGAGGAAGAGTGCTTGGTTAG
Upstream 100 bases:
>100_bases GGCATCAAGCGTTATGCTCGGGGTAAATTGACGGAACAACTTTTTAACCGACGCCGCTGTTGTTATGGCATATGATCAAA CCGGTTGATTTTTGGAGCTC
Downstream 100 bases:
>100_bases CGTCCATGCCTCTCCTCTTTTGACCTGTGCTGTTTTTACGGAATGTGATTATATTGTCAGAGAACGTTTGATTAACCACT ATTATATCCATTATGGAACA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTVSGNKVCFMTGATGGLGSELALSIARQGYSVFFTWNASRLKAEKTLEKIRRISPESDMIRCDIAKPKEIQQAFNAFLE KFSRLDLLLASASNFYRTGLPDVSETEWDNLVDTNLKGTFFTMQEAVKIMRNQSFVSRIITMTDVSADLVWRHFAPYTVS KAGIQHLVKIFAREFAPQVLVNAIAPGTITSNADLQRDEHSVEEKKLIEKIPLQRLGNPLDISRAVLFLLESDYITGQII SIDGGRVLG
Sequences:
>Translated_249_residues MTVSGNKVCFMTGATGGLGSELALSIARQGYSVFFTWNASRLKAEKTLEKIRRISPESDMIRCDIAKPKEIQQAFNAFLE KFSRLDLLLASASNFYRTGLPDVSETEWDNLVDTNLKGTFFTMQEAVKIMRNQSFVSRIITMTDVSADLVWRHFAPYTVS KAGIQHLVKIFAREFAPQVLVNAIAPGTITSNADLQRDEHSVEEKKLIEKIPLQRLGNPLDISRAVLFLLESDYITGQII SIDGGRVLG >Mature_248_residues TVSGNKVCFMTGATGGLGSELALSIARQGYSVFFTWNASRLKAEKTLEKIRRISPESDMIRCDIAKPKEIQQAFNAFLEK FSRLDLLLASASNFYRTGLPDVSETEWDNLVDTNLKGTFFTMQEAVKIMRNQSFVSRIITMTDVSADLVWRHFAPYTVSK AGIQHLVKIFAREFAPQVLVNAIAPGTITSNADLQRDEHSVEEKKLIEKIPLQRLGNPLDISRAVLFLLESDYITGQIIS IDGGRVLG
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI40254992, Length=247, Percent_Identity=30.3643724696356, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI32483357, Length=247, Percent_Identity=27.1255060728745, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI19923817, Length=258, Percent_Identity=26.7441860465116, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=25.9109311740891, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI10190704, Length=253, Percent_Identity=28.0632411067194, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=27.0161290322581, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=27.2, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI4503301, Length=190, Percent_Identity=26.3157894736842, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI59889578, Length=202, Percent_Identity=24.7524752475248, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40254986, Length=194, Percent_Identity=23.7113402061856, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=25.3968253968254, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=27.3469387755102, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1789208, Length=242, Percent_Identity=28.099173553719, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI87082160, Length=246, Percent_Identity=26.8292682926829, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=27.1604938271605, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=27.843137254902, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=24.7967479674797, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=22.8571428571429, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1786812, Length=263, Percent_Identity=27.7566539923954, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=21.5139442231076, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789057, Length=258, Percent_Identity=24.8062015503876, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=26.8292682926829, Blast_Score=87, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562906, Length=270, Percent_Identity=28.1481481481481, Blast_Score=85, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=26.3358778625954, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17561272, Length=235, Percent_Identity=28.5106382978723, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536025, Length=251, Percent_Identity=28.2868525896414, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=25.6, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=27.3408239700375, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=24.0963855421687, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536651, Length=252, Percent_Identity=28.1746031746032, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=24.5283018867925, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=27.5471698113208, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=24.0816326530612, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=26.5151515151515, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=25, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=25.6505576208178, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562904, Length=268, Percent_Identity=25, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=25.4980079681275, Blast_Score=89, Evalue=8e-19, Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=27.9835390946502, Blast_Score=113, Evalue=1e-25, Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=30.7392996108949, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=28.1124497991968, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=28.0632411067194, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=25, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=26.7441860465116, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281364494, Length=242, Percent_Identity=23.1404958677686, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=26.5625, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=23.8805970149254, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24644337, Length=209, Percent_Identity=23.9234449760766, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27779; Mature: 27648
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSGNKVCFMTGATGGLGSELALSIARQGYSVFFTWNASRLKAEKTLEKIRRISPESDM CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCE IRCDIAKPKEIQQAFNAFLEKFSRLDLLLASASNFYRTGLPDVSETEWDNLVDTNLKGTF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCCCHH FTMQEAVKIMRNQSFVSRIITMTDVSADLVWRHFAPYTVSKAGIQHLVKIFAREFAPQVL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VNAIAPGTITSNADLQRDEHSVEEKKLIEKIPLQRLGNPLDISRAVLFLLESDYITGQII HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEE SIDGGRVLG EECCCEECC >Mature Secondary Structure TVSGNKVCFMTGATGGLGSELALSIARQGYSVFFTWNASRLKAEKTLEKIRRISPESDM CCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCE IRCDIAKPKEIQQAFNAFLEKFSRLDLLLASASNFYRTGLPDVSETEWDNLVDTNLKGTF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHCCCCCCHH FTMQEAVKIMRNQSFVSRIITMTDVSADLVWRHFAPYTVSKAGIQHLVKIFAREFAPQVL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VNAIAPGTITSNADLQRDEHSVEEKKLIEKIPLQRLGNPLDISRAVLFLLESDYITGQII HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCEEEE SIDGGRVLG EECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA