| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356245
Identifier: 119356245
GI number: 119356245
Start: 450212
End: 450766
Strand: Reverse
Name: 119356245
Synonym: Cpha266_0406
Alternate gene names: NA
Gene position: 450766-450212 (Counterclockwise)
Preceding gene: 119356246
Following gene: 119356244
Centisome position: 14.38
GC content: 50.63
Gene sequence:
>555_bases ATGAAAAAAAGAGCCCTTGCGGCCTCACTGGCTGCGACAATCATGACATTTGGAAACAGCGCGGGCGCTGCGGACTACCG GGACAGCTATGCCGTTGAGCAGAACCGCTATCGCAATGAATCCCGACAGGAACAGAGCGACGAACGCTTCACAAGAGATG AGCGGCAGCGTAATGGATACCAGGACAGGCAACGTCAGGCTCCAGTAATCCATGACGATTTCAGAACAGTAAAAGCAGCA CTTGAGCTCGATGATCGCCAACTCGACCGGTTTGTTGCTATCCGGGAGAACTATCGGGAGCATACCGGTTCAGTCTACAG GGAAATTGCGCTTCTGAAAGAAATCAGGCAAAACGAAGAGATGCGAAAACAGCGAAACTTCAGAACCATTGCCAAACTGA ACAGAAAAATAAGTGCGCTGCAGGATGAGCTCAACCGATACCGCATCCGCTCCATCCGGAACTACCGTGATGTATGCAAC AACCAGCAGCGGGAGCGATTTGATCGTTTTGCGGCACATAACAACCCGACATTTGCCCTGATGTTCAGATTTTAA
Upstream 100 bases:
>100_bases ACTCCTTCAACGAAAAAAACAGAGCGACGAAATAATCTTGTTCAGAGTGTTACGACAAAATGAAAACGATATGACAACCA TGTTAAAAAAAGGAGCGGGC
Downstream 100 bases:
>100_bases CCAACGTGACGATATAAACAGACAGCGACGATAACACCAAAACAAAACGATAACGATGAACAAAAAAACAGTGACGATGA TCACCGCAATGCTCCTTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKKRALAASLAATIMTFGNSAGAADYRDSYAVEQNRYRNESRQEQSDERFTRDERQRNGYQDRQRQAPVIHDDFRTVKAA LELDDRQLDRFVAIRENYREHTGSVYREIALLKEIRQNEEMRKQRNFRTIAKLNRKISALQDELNRYRIRSIRNYRDVCN NQQRERFDRFAAHNNPTFALMFRF
Sequences:
>Translated_184_residues MKKRALAASLAATIMTFGNSAGAADYRDSYAVEQNRYRNESRQEQSDERFTRDERQRNGYQDRQRQAPVIHDDFRTVKAA LELDDRQLDRFVAIRENYREHTGSVYREIALLKEIRQNEEMRKQRNFRTIAKLNRKISALQDELNRYRIRSIRNYRDVCN NQQRERFDRFAAHNNPTFALMFRF >Mature_184_residues MKKRALAASLAATIMTFGNSAGAADYRDSYAVEQNRYRNESRQEQSDERFTRDERQRNGYQDRQRQAPVIHDDFRTVKAA LELDDRQLDRFVAIRENYREHTGSVYREIALLKEIRQNEEMRKQRNFRTIAKLNRKISALQDELNRYRIRSIRNYRDVCN NQQRERFDRFAAHNNPTFALMFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22176; Mature: 22176
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRALAASLAATIMTFGNSAGAADYRDSYAVEQNRYRNESRQEQSDERFTRDERQRNGY CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCH QDRQRQAPVIHDDFRTVKAALELDDRQLDRFVAIRENYREHTGSVYREIALLKEIRQNEE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRKQRNFRTIAKLNRKISALQDELNRYRIRSIRNYRDVCNNQQRERFDRFAAHNNPTFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE MFRF EECC >Mature Secondary Structure MKKRALAASLAATIMTFGNSAGAADYRDSYAVEQNRYRNESRQEQSDERFTRDERQRNGY CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCH QDRQRQAPVIHDDFRTVKAALELDDRQLDRFVAIRENYREHTGSVYREIALLKEIRQNEE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRKQRNFRTIAKLNRKISALQDELNRYRIRSIRNYRDVCNNQQRERFDRFAAHNNPTFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEE MFRF EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA