| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356244
Identifier: 119356244
GI number: 119356244
Start: 449575
End: 450156
Strand: Reverse
Name: 119356244
Synonym: Cpha266_0405
Alternate gene names: NA
Gene position: 450156-449575 (Counterclockwise)
Preceding gene: 119356245
Following gene: 119356243
Centisome position: 14.36
GC content: 51.03
Gene sequence:
>582_bases ATGAACAAAAAAACAGTGACGATGATCACCGCAATGCTCCTTGGTTTCAGCAGCATTGCTTCAGCGACGGACTACAGCAG TTACTCCGATGCGAAACTTTCCGAAATGCGCGGAACCATGCGAACGGCATCACAGGAAGAGCGGCAGGCATATCAAACCG AGTGCCAGAAACGAACCGCACTCACCAGCCCCGACCAGCGGTCGAATCGAGCCGGCATAACCCGACATAAAACAAAGGGC AGCAGTCCAATGATCCTGAAAGAACAACTCGGGCTGAGCGACACACAAAGCAGACAGCTTCAGGAGATGCGCCAGAAACA TGCCGGGCTTGCCACGAAAGAAAGATCACGGCTTGCCGAACTCCAAAGACAATTGATGGATGCGTCTATGACCAGCAATC CGGACAAACAGCGTATTGCGGTGCTTGCACAGCAAATCGGAAAAGAGCAGAGTGATCTTGCCATCATGAGAAGCGCAAGC ATTCAGGAGGTCGCTTCTGTACTGACACCAAAACAGCGTGAAAAAATGAAAACATTCATGCTGCAGATCTCTCCACGCAA GCAAGGCGGCATGAAGATGTAA
Upstream 100 bases:
>100_bases GCGGCACATAACAACCCGACATTTGCCCTGATGTTCAGATTTTAACCAACGTGACGATATAAACAGACAGCGACGATAAC ACCAAAACAAAACGATAACG
Downstream 100 bases:
>100_bases GAAAAATTTGGTCGATACCGGAAAAGTTGACGGTGCAAATGCAGGGAGTCCCGGAGTATTTTCTCCCGCATTTGCACGCT CCGGCGTAAAATACTTTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNKKTVTMITAMLLGFSSIASATDYSSYSDAKLSEMRGTMRTASQEERQAYQTECQKRTALTSPDQRSNRAGITRHKTKG SSPMILKEQLGLSDTQSRQLQEMRQKHAGLATKERSRLAELQRQLMDASMTSNPDKQRIAVLAQQIGKEQSDLAIMRSAS IQEVASVLTPKQREKMKTFMLQISPRKQGGMKM
Sequences:
>Translated_193_residues MNKKTVTMITAMLLGFSSIASATDYSSYSDAKLSEMRGTMRTASQEERQAYQTECQKRTALTSPDQRSNRAGITRHKTKG SSPMILKEQLGLSDTQSRQLQEMRQKHAGLATKERSRLAELQRQLMDASMTSNPDKQRIAVLAQQIGKEQSDLAIMRSAS IQEVASVLTPKQREKMKTFMLQISPRKQGGMKM >Mature_193_residues MNKKTVTMITAMLLGFSSIASATDYSSYSDAKLSEMRGTMRTASQEERQAYQTECQKRTALTSPDQRSNRAGITRHKTKG SSPMILKEQLGLSDTQSRQLQEMRQKHAGLATKERSRLAELQRQLMDASMTSNPDKQRIAVLAQQIGKEQSDLAIMRSAS IQEVASVLTPKQREKMKTFMLQISPRKQGGMKM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21663; Mature: 21663
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKTVTMITAMLLGFSSIASATDYSSYSDAKLSEMRGTMRTASQEERQAYQTECQKRTA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LTSPDQRSNRAGITRHKTKGSSPMILKEQLGLSDTQSRQLQEMRQKHAGLATKERSRLAE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH LQRQLMDASMTSNPDKQRIAVLAQQIGKEQSDLAIMRSASIQEVASVLTPKQREKMKTFM HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQISPRKQGGMKM HHCCCCCCCCCCC >Mature Secondary Structure MNKKTVTMITAMLLGFSSIASATDYSSYSDAKLSEMRGTMRTASQEERQAYQTECQKRTA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LTSPDQRSNRAGITRHKTKGSSPMILKEQLGLSDTQSRQLQEMRQKHAGLATKERSRLAE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH LQRQLMDASMTSNPDKQRIAVLAQQIGKEQSDLAIMRSASIQEVASVLTPKQREKMKTFM HHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LQISPRKQGGMKM HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA