| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356219
Identifier: 119356219
GI number: 119356219
Start: 420965
End: 421459
Strand: Reverse
Name: 119356219
Synonym: Cpha266_0380
Alternate gene names: NA
Gene position: 421459-420965 (Counterclockwise)
Preceding gene: 119356220
Following gene: 119356218
Centisome position: 13.45
GC content: 45.86
Gene sequence:
>495_bases ATGTCGGGATGCGGCGCTCCCCAATCTGAGCGCCGCAAACCGGAAACAGGATTTATAGGTGAGGGACATCCCCAGCAGGA AAGCTGGGATATCCACCTGAACCTCACTGATGCCGGCATTCCGAAAGCCAGCATAAAAGCGGGGTACGCCGCTGAATTCA ATAAAAACAGCAAAAAAGAATATCATCTGCAAAAGGGTGTTACCGTTACCTTTTTCAACAGCGAAAAAGAGCCATCCACC ATCCTTAAAGCACAGGAAGCCGTTGTCCATGATAATCTGGATATTGAGGCAAGAGGAAACATTGTCATTACAACCGACAA TACAACCACGATAAAAACGGAATCGATCAAACGTACCGCTAAAGACAAAATGATTCGTTCCAATGACTATGTCACCATCA CAAGACCTGGAGAGACACTGACAGGATATGGCTTTGAAAGTGACCAGGCGCTTAAAAAATACAGGATTTTCCGAGCAAGC GGTGAATCGCATTAA
Upstream 100 bases:
>100_bases TTACTTTCAAGGTGATGAATCAGCTCAATCTCAAATAAAAAGGCTCTGATTGCTCTTGAAAAGATTCATCTTTTTGTTTT TAACGGTCTTTGCATTTGTT
Downstream 100 bases:
>100_bases CCTTCAACATTGTTTTTTTTAATGAAATTACACCTCTTAAAATCAAAAATCCACAACGCAAGGGTAACAAGCGGAGATCT TGAATATGAAGGAAGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSGCGAPQSERRKPETGFIGEGHPQQESWDIHLNLTDAGIPKASIKAGYAAEFNKNSKKEYHLQKGVTVTFFNSEKEPST ILKAQEAVVHDNLDIEARGNIVITTDNTTTIKTESIKRTAKDKMIRSNDYVTITRPGETLTGYGFESDQALKKYRIFRAS GESH
Sequences:
>Translated_164_residues MSGCGAPQSERRKPETGFIGEGHPQQESWDIHLNLTDAGIPKASIKAGYAAEFNKNSKKEYHLQKGVTVTFFNSEKEPST ILKAQEAVVHDNLDIEARGNIVITTDNTTTIKTESIKRTAKDKMIRSNDYVTITRPGETLTGYGFESDQALKKYRIFRAS GESH >Mature_163_residues SGCGAPQSERRKPETGFIGEGHPQQESWDIHLNLTDAGIPKASIKAGYAAEFNKNSKKEYHLQKGVTVTFFNSEKEPSTI LKAQEAVVHDNLDIEARGNIVITTDNTTTIKTESIKRTAKDKMIRSNDYVTITRPGETLTGYGFESDQALKKYRIFRASG ESH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18235; Mature: 18103
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGCGAPQSERRKPETGFIGEGHPQQESWDIHLNLTDAGIPKASIKAGYAAEFNKNSKKE CCCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCE YHLQKGVTVTFFNSEKEPSTILKAQEAVVHDNLDIEARGNIVITTDNTTTIKTESIKRTA EEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEECCCEEEEHHHHHHHH KDKMIRSNDYVTITRPGETLTGYGFESDQALKKYRIFRASGESH HHHHCCCCCEEEEECCCCEEEECCCCCHHHHHHEEEEECCCCCC >Mature Secondary Structure SGCGAPQSERRKPETGFIGEGHPQQESWDIHLNLTDAGIPKASIKAGYAAEFNKNSKKE CCCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCCCE YHLQKGVTVTFFNSEKEPSTILKAQEAVVHDNLDIEARGNIVITTDNTTTIKTESIKRTA EEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCEEEEECCCEEEEHHHHHHHH KDKMIRSNDYVTITRPGETLTGYGFESDQALKKYRIFRASGESH HHHHCCCCCEEEEECCCCEEEECCCCCHHHHHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA