| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is gmk [H]
Identifier: 119356214
GI number: 119356214
Start: 418378
End: 418962
Strand: Direct
Name: gmk [H]
Synonym: Cpha266_0375
Alternate gene names: 119356214
Gene position: 418378-418962 (Clockwise)
Preceding gene: 119356213
Following gene: 119356215
Centisome position: 13.35
GC content: 43.59
Gene sequence:
>585_bases ATGACGATCAGCAGAGGGCCGACGGGAAAGCTCGTGGTTTTTTCAGCTCCGTCGGGAACAGGAAAGTCAACGATTGCGAA AATTGTTCTTGAACGAATTCCTTCGCTCGCTTTTTCCGTATCGGCAACAACAAGACCGATGCGTGCTGGTGAGGAGGAAG GGGTTCATTATTATTTTCTTGATAAAAAGAAGTTTGAAGAGAAGATTCGTGACGGCGGGTTTATAGAGCATGAATATTTT TTCAATAACTACTATGGCACATTGCTCGATAAAACGGTTGATGCGGTTAATTCGGGCCATCATCTGCTTTTTGATCTCGA CGTCAAGGGTGCTTTGAATCTGAAAACTCTTTTTCCTCTTAATTCATTATTGATATTTATAAGGCCTCCTGATATGGCAA CTCTCAGAGAGAGATTGTTAAAGCGGGAAAGCGAAGATGCGGATGCATTGAATGTTCGTCTTGAGCGGGCTGAACTTGAA CTTGGTTATGTTGATCAGTTCGATGAGGTGATTGTTAATGATTGTCTCGACCGGGCGGCCGATGCCGTTACGGCGAAAGT AAGTGAGTTTCTTTCAAACACGTAA
Upstream 100 bases:
>100_bases GCGTCAAAATCCCAGAGCGCCGAAATCTCACAGAAAATTGTTCATGTAAAAGAAGAGCTTGAGAAAATTCGGGAACAGTT ACAAAATATCGAGTGATTTT
Downstream 100 bases:
>100_bases ATACTTGTGCCATGTCGGTTAATCCTGTTGATCTCAACAAGCTGAGAAGTGCGCACGCTAATTTGTACGAGACGGTGGTT GCGATTTCAAAACGAGCGAA
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTISRGPTGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFLDKKKFEEKIRDGGFIEHEYF FNNYYGTLLDKTVDAVNSGHHLLFDLDVKGALNLKTLFPLNSLLIFIRPPDMATLRERLLKRESEDADALNVRLERAELE LGYVDQFDEVIVNDCLDRAADAVTAKVSEFLSNT
Sequences:
>Translated_194_residues MTISRGPTGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFLDKKKFEEKIRDGGFIEHEYF FNNYYGTLLDKTVDAVNSGHHLLFDLDVKGALNLKTLFPLNSLLIFIRPPDMATLRERLLKRESEDADALNVRLERAELE LGYVDQFDEVIVNDCLDRAADAVTAKVSEFLSNT >Mature_193_residues TISRGPTGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFLDKKKFEEKIRDGGFIEHEYFF NNYYGTLLDKTVDAVNSGHHLLFDLDVKGALNLKTLFPLNSLLIFIRPPDMATLRERLLKRESEDADALNVRLERAELEL GYVDQFDEVIVNDCLDRAADAVTAKVSEFLSNT
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874833, Length=190, Percent_Identity=37.8947368421053, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI4504221, Length=190, Percent_Identity=37.8947368421053, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI226874831, Length=190, Percent_Identity=37.8947368421053, Blast_Score=109, Evalue=2e-24, Organism=Homo sapiens, GI38570142, Length=174, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-14, Organism=Homo sapiens, GI111154074, Length=163, Percent_Identity=29.4478527607362, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI21361598, Length=192, Percent_Identity=25, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI14780902, Length=200, Percent_Identity=26.5, Blast_Score=68, Evalue=5e-12, Organism=Homo sapiens, GI52630447, Length=178, Percent_Identity=25.8426966292135, Blast_Score=64, Evalue=6e-11, Organism=Escherichia coli, GI1790080, Length=173, Percent_Identity=35.8381502890173, Blast_Score=110, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17508835, Length=173, Percent_Identity=42.7745664739884, Blast_Score=128, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193203132, Length=173, Percent_Identity=42.7745664739884, Blast_Score=127, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71984092, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320662, Length=171, Percent_Identity=40.9356725146199, Blast_Score=128, Evalue=6e-31, Organism=Drosophila melanogaster, GI21356141, Length=178, Percent_Identity=38.7640449438202, Blast_Score=110, Evalue=6e-25, Organism=Drosophila melanogaster, GI45551002, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI85816106, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI85816281, Length=128, Percent_Identity=30.46875, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI161077626, Length=191, Percent_Identity=25.130890052356, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24640542, Length=191, Percent_Identity=25.130890052356, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI45554481, Length=191, Percent_Identity=25.130890052356, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI85724806, Length=191, Percent_Identity=25.130890052356, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI45554489, Length=191, Percent_Identity=25.130890052356, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007136, Length=191, Percent_Identity=25.130890052356, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI221330166, Length=145, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330162, Length=145, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI221330164, Length=145, Percent_Identity=31.0344827586207, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 21750; Mature: 21619
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISRGPTGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFL CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCEEEEEE DKKKFEEKIRDGGFIEHEYFFNNYYGTLLDKTVDAVNSGHHLLFDLDVKGALNLKTLFPL CHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCC NSLLIFIRPPDMATLRERLLKRESEDADALNVRLERAELELGYVDQFDEVIVNDCLDRAA CCEEEEECCCCHHHHHHHHHHCCCCCCCHHHEEEEEHHEEECCHHHHHHHHHHHHHHHHH DAVTAKVSEFLSNT HHHHHHHHHHHCCC >Mature Secondary Structure TISRGPTGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFL CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCEEEEEE DKKKFEEKIRDGGFIEHEYFFNNYYGTLLDKTVDAVNSGHHLLFDLDVKGALNLKTLFPL CHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCC NSLLIFIRPPDMATLRERLLKRESEDADALNVRLERAELELGYVDQFDEVIVNDCLDRAA CCEEEEECCCCHHHHHHHHHHCCCCCCCHHHEEEEEHHEEECCHHHHHHHHHHHHHHHHH DAVTAKVSEFLSNT HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA