| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356152
Identifier: 119356152
GI number: 119356152
Start: 344055
End: 344348
Strand: Direct
Name: 119356152
Synonym: Cpha266_0310
Alternate gene names: NA
Gene position: 344055-344348 (Clockwise)
Preceding gene: 119356149
Following gene: 119356153
Centisome position: 10.98
GC content: 46.94
Gene sequence:
>294_bases ATGATGCTCTGCTTGTCAGTTGCGGTCAGCGTACCGGTTTTTGCTGATAAAGCTCCCTCCTCTTTACAGGGAAAGAAACT TTTCAACAGTTCATCGCTTGGAGGCGCTGCAAATACCAAAACTTGTAACGCATGTCATCCCGGCGGACGCGGGCTTGAGA GTGCAGGCGGTAACCCTGAGCTTTCAAAAGTGATCAATACCTGTATTGCAGGGCCGTTGAATGGCTCGAAACTTGAACCG AACTCGATTGAAATGCAGTCACTTCTGCTTTATATCAAGTCACTTAAACAGTAA
Upstream 100 bases:
>100_bases GGATTTTCCATGCCGAATTGATTACCTTCAAGAAAGAATTTCAGGAAAACCTCTACATAAAGGGTTGCTTGCCATGAAAC AAAGGGGATCTGTAGCCGGG
Downstream 100 bases:
>100_bases CCATCAAAGCGAATCATGCAAAAGGAAACGATCAGCATTCTCGGTTGCGGCTGGCTTGGAATGCCGCTTGCCAAAGCACT CATTGCGCAGGACTATCCGG
Product: C-type cytochrome, putative
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MMLCLSVAVSVPVFADKAPSSLQGKKLFNSSSLGGAANTKTCNACHPGGRGLESAGGNPELSKVINTCIAGPLNGSKLEP NSIEMQSLLLYIKSLKQ
Sequences:
>Translated_97_residues MMLCLSVAVSVPVFADKAPSSLQGKKLFNSSSLGGAANTKTCNACHPGGRGLESAGGNPELSKVINTCIAGPLNGSKLEP NSIEMQSLLLYIKSLKQ >Mature_97_residues MMLCLSVAVSVPVFADKAPSSLQGKKLFNSSSLGGAANTKTCNACHPGGRGLESAGGNPELSKVINTCIAGPLNGSKLEP NSIEMQSLLLYIKSLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9992; Mature: 9992
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLCLSVAVSVPVFADKAPSSLQGKKLFNSSSLGGAANTKTCNACHPGGRGLESAGGNPE CEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LSKVINTCIAGPLNGSKLEPNSIEMQSLLLYIKSLKQ HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MMLCLSVAVSVPVFADKAPSSLQGKKLFNSSSLGGAANTKTCNACHPGGRGLESAGGNPE CEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH LSKVINTCIAGPLNGSKLEPNSIEMQSLLLYIKSLKQ HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA