| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356149
Identifier: 119356149
GI number: 119356149
Start: 341454
End: 342191
Strand: Direct
Name: 119356149
Synonym: Cpha266_0307
Alternate gene names: NA
Gene position: 341454-342191 (Clockwise)
Preceding gene: 119356148
Following gene: 119356152
Centisome position: 10.9
GC content: 54.88
Gene sequence:
>738_bases ATGAACAGCTACCTGTACGACGGAACCCCGGAAGGCCTGCTCTCCGCGGCCTTCCGCATTATTGCCGACGTGAGCGATCC CGAAAAAGCCACGCTCGCCGAACGCAGGGACACGCTGTTCGAGGAGGGGGAGTTTATCGGAACCGATGCGGTTGCGGCCG AAAAGCTTTTCAAAAGGCTCCGCCTTGAAGCCCCCGACGCGGCATATATTTTCTACTACTTTACCCTGGCCGAAAAAGAG GGTCTGGAGACCAGTCTTCTGCGCTATCTTGCCCTGGCGCTTCGCCACGGTGACAGGGTGAATGGCAATCTTATCGATCC TGCGGTTAGAGATGTCGTCAGCGTTTCACGAAAAGCACAACGGGAACTGCATCGCATGAAAGGGCTTGTCCGCTTCGAGA AGCTTCGCGATGGAGCCTATCTTGCCAGGATGGAGCCCGATCACAACATCCTGCAGCCGCTTGCAGTGCATTTCAGCCGT CGTCTCAGGGCTGAAGACTGGTTCATCTACGACGTCCGCCGTCGATTTGCCGCCCGATGGCACTGCGGTAATCTGCAGTT CGGTACTATCGAGCAGTTTACCGCTCCCGCGCTTTCAGAAGAGGAAATGAGGATACAGGCCCTCTGGCAAGCTTTTTTTA AAACCATCGCCATTTCCGACAGGAAAAATCCCGGTCTGCAGAAATCGAATATGCCCATGAAGTACTGGAAGTACCTTACC GAAAAGCAGGGAGAGTGA
Upstream 100 bases:
>100_bases CGGCAACCGGCCCTTCTGAAGAGCCGGCTCCTGCTTGCCGGGGGCGTCGCTCCGGAACCTCCGAAGCAGCTTGTGCTGCC CGGCCTTTTTGCCTGATACC
Downstream 100 bases:
>100_bases TGACTGTTGGTGATTTTTCTCAATGATCAATGCATCCATTGCGGTGAACGTCATGGATAAGAGTGACTTGTGATCTCGCC TTTATTGGCAGGATCGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNSYLYDGTPEGLLSAAFRIIADVSDPEKATLAERRDTLFEEGEFIGTDAVAAEKLFKRLRLEAPDAAYIFYYFTLAEKE GLETSLLRYLALALRHGDRVNGNLIDPAVRDVVSVSRKAQRELHRMKGLVRFEKLRDGAYLARMEPDHNILQPLAVHFSR RLRAEDWFIYDVRRRFAARWHCGNLQFGTIEQFTAPALSEEEMRIQALWQAFFKTIAISDRKNPGLQKSNMPMKYWKYLT EKQGE
Sequences:
>Translated_245_residues MNSYLYDGTPEGLLSAAFRIIADVSDPEKATLAERRDTLFEEGEFIGTDAVAAEKLFKRLRLEAPDAAYIFYYFTLAEKE GLETSLLRYLALALRHGDRVNGNLIDPAVRDVVSVSRKAQRELHRMKGLVRFEKLRDGAYLARMEPDHNILQPLAVHFSR RLRAEDWFIYDVRRRFAARWHCGNLQFGTIEQFTAPALSEEEMRIQALWQAFFKTIAISDRKNPGLQKSNMPMKYWKYLT EKQGE >Mature_245_residues MNSYLYDGTPEGLLSAAFRIIADVSDPEKATLAERRDTLFEEGEFIGTDAVAAEKLFKRLRLEAPDAAYIFYYFTLAEKE GLETSLLRYLALALRHGDRVNGNLIDPAVRDVVSVSRKAQRELHRMKGLVRFEKLRDGAYLARMEPDHNILQPLAVHFSR RLRAEDWFIYDVRRRFAARWHCGNLQFGTIEQFTAPALSEEEMRIQALWQAFFKTIAISDRKNPGLQKSNMPMKYWKYLT EKQGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28414; Mature: 28414
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYLYDGTPEGLLSAAFRIIADVSDPEKATLAERRDTLFEEGEFIGTDAVAAEKLFKRL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RLEAPDAAYIFYYFTLAEKEGLETSLLRYLALALRHGDRVNGNLIDPAVRDVVSVSRKAQ CCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RELHRMKGLVRFEKLRDGAYLARMEPDHNILQPLAVHFSRRLRAEDWFIYDVRRRFAARW HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC HCGNLQFGTIEQFTAPALSEEEMRIQALWQAFFKTIAISDRKNPGLQKSNMPMKYWKYLT CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH EKQGE HCCCC >Mature Secondary Structure MNSYLYDGTPEGLLSAAFRIIADVSDPEKATLAERRDTLFEEGEFIGTDAVAAEKLFKRL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH RLEAPDAAYIFYYFTLAEKEGLETSLLRYLALALRHGDRVNGNLIDPAVRDVVSVSRKAQ CCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH RELHRMKGLVRFEKLRDGAYLARMEPDHNILQPLAVHFSRRLRAEDWFIYDVRRRFAARW HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC HCGNLQFGTIEQFTAPALSEEEMRIQALWQAFFKTIAISDRKNPGLQKSNMPMKYWKYLT CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH EKQGE HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA