| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356140
Identifier: 119356140
GI number: 119356140
Start: 327416
End: 328633
Strand: Reverse
Name: 119356140
Synonym: Cpha266_0298
Alternate gene names: NA
Gene position: 328633-327416 (Counterclockwise)
Preceding gene: 119356142
Following gene: 119356139
Centisome position: 10.49
GC content: 55.83
Gene sequence:
>1218_bases ATGAAACTTGGTAATCCTGCAACCGGAGATGACTTTTTTGGTCGTACTCAGGAACTGAGTGACCTTTGGCGTTATCTGGA ATCCGACCACATACGTTTTCCCGGTGTCCGCCGTCTGGGAAAAACCTCCATTCTGCGACGACTGGAAAGCGAAGCGGCGG ATCATGGCCTTCTTGCAAGATGGCTGGATGTTTCGAATATTGATTCTGCGCCGGGATTTATTTCGCTTCTGGATCAGGCA TTTCCTGAAAAATCCATCAGGAGCTTTCTCTCCGACAGGGCGCAACAGGCAGGAAGCTGGTTCAATCGTATCCGCAAAAT TGACGCCACCCTGCCCGATGCCGTCGGTGGCGGGGGATTCGGCATAGAATTCGGCGGCGAAACAGTTCCGGAGTGGGAAA AGGATGCCGGCTCGCTGCATTCGAGATTGTGCAATCAGCCCTTGCTGATACTGCTCGACGAGTTCCCCTGGATGCTGGAA AAGCTCATTCAGCGCGATCGACAGGAAGCAGAGCAACTCCTCTCATGGTTACGTATCTGGCGCCAGTCGCAGGGAAGCTG CCGTTTCGTCTTTACCGGCTCAATCGGCCTGCAATCCCTGCTGGAACGCCACGGCCTTGGTGAAACCATGAATGACTGCT ATCCATACCCACTGGGGCCATACAAGCTGTCGGAAGCCCGAGGTCTTTGGCAATATTTCGCTCCGATTGCAGACAAAACC CCCTGGGAAATTGCGGATCCGGTGATCGACTACGCCCTGGGCCGCGTCGGCTGGCTGTCGCCCTATTTTTTAAGCCTGTT GCTCGATGAAAGCATGCGGGCGGCAAGGGAGCGGCGACAGGAGTGTCCCGCCGATGCGACAGGCGAAGCGCGCATTGAAA TCGAGGACGTCGATGACGCCTACGAGAACCTGCTTGCAGAACGTTCGCGCTTCCATCACTGGGAAAAGCGCCTCAAAAGC GCTCTGGAACCCGCCGACCTTGATCTCTGTCTCAGCCTGCTTTCTCATCTTTCCCGTCATGCAGATGGGCTGACCCTGCC TCAGTTAAGCAGCCGGCTGGCACGGCGGGAACCAGAGCCCGACCTTCGCACCCGGCGGATCCAGGATCTTCTGGTGCGTC TGACCGACGAAGGCTATACCAGCCCGCCAGATAGCAATAAACGTATCCAGTTTCTTTCATTCCCTTTACGCGATTGGTGG AACCGCAACCATGTCTGA
Upstream 100 bases:
>100_bases ATTCAGAAGAAAAAAACTCTTGACCGGTATCCAGAGTTGATTTATTTATTCAAAAATGAATATATTCAATCGTGAATAAA TTTAAACCACAGAATCAATA
Downstream 100 bases:
>100_bases CCATAGTTCAATAGACAACCAGCCTGCAGGCGGATTTGCCGCTATCAGCAAGTACAACCCGCATCTTTGGAGTGCGGATC AGTTACGCGCCATTTTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MKLGNPATGDDFFGRTQELSDLWRYLESDHIRFPGVRRLGKTSILRRLESEAADHGLLARWLDVSNIDSAPGFISLLDQA FPEKSIRSFLSDRAQQAGSWFNRIRKIDATLPDAVGGGGFGIEFGGETVPEWEKDAGSLHSRLCNQPLLILLDEFPWMLE KLIQRDRQEAEQLLSWLRIWRQSQGSCRFVFTGSIGLQSLLERHGLGETMNDCYPYPLGPYKLSEARGLWQYFAPIADKT PWEIADPVIDYALGRVGWLSPYFLSLLLDESMRAARERRQECPADATGEARIEIEDVDDAYENLLAERSRFHHWEKRLKS ALEPADLDLCLSLLSHLSRHADGLTLPQLSSRLARREPEPDLRTRRIQDLLVRLTDEGYTSPPDSNKRIQFLSFPLRDWW NRNHV
Sequences:
>Translated_405_residues MKLGNPATGDDFFGRTQELSDLWRYLESDHIRFPGVRRLGKTSILRRLESEAADHGLLARWLDVSNIDSAPGFISLLDQA FPEKSIRSFLSDRAQQAGSWFNRIRKIDATLPDAVGGGGFGIEFGGETVPEWEKDAGSLHSRLCNQPLLILLDEFPWMLE KLIQRDRQEAEQLLSWLRIWRQSQGSCRFVFTGSIGLQSLLERHGLGETMNDCYPYPLGPYKLSEARGLWQYFAPIADKT PWEIADPVIDYALGRVGWLSPYFLSLLLDESMRAARERRQECPADATGEARIEIEDVDDAYENLLAERSRFHHWEKRLKS ALEPADLDLCLSLLSHLSRHADGLTLPQLSSRLARREPEPDLRTRRIQDLLVRLTDEGYTSPPDSNKRIQFLSFPLRDWW NRNHV >Mature_405_residues MKLGNPATGDDFFGRTQELSDLWRYLESDHIRFPGVRRLGKTSILRRLESEAADHGLLARWLDVSNIDSAPGFISLLDQA FPEKSIRSFLSDRAQQAGSWFNRIRKIDATLPDAVGGGGFGIEFGGETVPEWEKDAGSLHSRLCNQPLLILLDEFPWMLE KLIQRDRQEAEQLLSWLRIWRQSQGSCRFVFTGSIGLQSLLERHGLGETMNDCYPYPLGPYKLSEARGLWQYFAPIADKT PWEIADPVIDYALGRVGWLSPYFLSLLLDESMRAARERRQECPADATGEARIEIEDVDDAYENLLAERSRFHHWEKRLKS ALEPADLDLCLSLLSHLSRHADGLTLPQLSSRLARREPEPDLRTRRIQDLLVRLTDEGYTSPPDSNKRIQFLSFPLRDWW NRNHV
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46487; Mature: 46487
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGNPATGDDFFGRTQELSDLWRYLESDHIRFPGVRRLGKTSILRRLESEAADHGLLAR CCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WLDVSNIDSAPGFISLLDQAFPEKSIRSFLSDRAQQAGSWFNRIRKIDATLPDAVGGGGF HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GIEFGGETVPEWEKDAGSLHSRLCNQPLLILLDEFPWMLEKLIQRDRQEAEQLLSWLRIW EECCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQSQGSCRFVFTGSIGLQSLLERHGLGETMNDCYPYPLGPYKLSEARGLWQYFAPIADKT HCCCCCEEEEEECCHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PWEIADPVIDYALGRVGWLSPYFLSLLLDESMRAARERRQECPADATGEARIEIEDVDDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHH YENLLAERSRFHHWEKRLKSALEPADLDLCLSLLSHLSRHADGLTLPQLSSRLARREPEP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC DLRTRRIQDLLVRLTDEGYTSPPDSNKRIQFLSFPLRDWWNRNHV HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCCC >Mature Secondary Structure MKLGNPATGDDFFGRTQELSDLWRYLESDHIRFPGVRRLGKTSILRRLESEAADHGLLAR CCCCCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH WLDVSNIDSAPGFISLLDQAFPEKSIRSFLSDRAQQAGSWFNRIRKIDATLPDAVGGGGF HHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GIEFGGETVPEWEKDAGSLHSRLCNQPLLILLDEFPWMLEKLIQRDRQEAEQLLSWLRIW EECCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQSQGSCRFVFTGSIGLQSLLERHGLGETMNDCYPYPLGPYKLSEARGLWQYFAPIADKT HCCCCCEEEEEECCHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PWEIADPVIDYALGRVGWLSPYFLSLLLDESMRAARERRQECPADATGEARIEIEDVDDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHH YENLLAERSRFHHWEKRLKSALEPADLDLCLSLLSHLSRHADGLTLPQLSSRLARREPEP HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC DLRTRRIQDLLVRLTDEGYTSPPDSNKRIQFLSFPLRDWWNRNHV HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA