| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356121
Identifier: 119356121
GI number: 119356121
Start: 306836
End: 307525
Strand: Direct
Name: 119356121
Synonym: Cpha266_0277
Alternate gene names: NA
Gene position: 306836-307525 (Clockwise)
Preceding gene: 119356120
Following gene: 119356122
Centisome position: 9.79
GC content: 32.9
Gene sequence:
>690_bases ATGAAAGATATAATAACTGAATTTGATAGACCCATCGTTTTTAGAACAGTTAATGCCGAAGTATATGAAAGCACAATAAA TTCAGGCTCAATTTGGTTACGCTCATCTGATTATTATGTATACTTGGAAGACAAGGCAAGATGTGACAAATCAGAGGGGG CAAACGGAACAAAAACTTTATTACCATTATGTTTTCATCCAGAGGGAGGAACAAAACAAATTTATTATGGTGACGGAATT ATAGGTCAAAAAATATCTCCTCACTATATATTTTCAATGCATGGTTCAAGCGTTTCGGAATGCGTTCGTAAAGATTTTGG TGAATTCACTTTCGGCATAAAATGTATTTCGAGGCTAAGCGCAGAAATTTTATATGAAGCATCAAAATATTTAAATGTCA CAGGCTATAGATTTGGCCAAGTAAGCTATCAATATACCGCTTTATGCAGATCTTTACATTCTCACGGTGCTGCAGTCGGA TTAGGTGGTAATCTTCCTGAGTTTTTGCAAAGTATAAATACTGACGTTCTAAGAAAAGATCCTGTATTACCTTTTATTGA ACAGGACGAATGGAGAATTGTAATTTTTACAAATAGCTTAATAAAAAATGACTACAATGAACCGCTTAAGTTAATTGTAA ATCCAAACAATTTTTATGAATATAAATCTTCTGCTAAATTAAATGCCTAA
Upstream 100 bases:
>100_bases AATGCCTAACAAGGCAAATTCACTCGGACGTCAAAAAGCGCCGCTACGCTCTGCTATTTTGCCTCCGGTGATTTGCGGCG TTAGGCAAAGGAATTGAGCA
Downstream 100 bases:
>100_bases CAAATCGTTCCAGCACCACTCAGGCGCTTTGCGCCTACGTTGGACAGTTTTTAAGTTTTAACAGACCTCACAACCTTGGA GAATCAATTGCCACGAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MKDIITEFDRPIVFRTVNAEVYESTINSGSIWLRSSDYYVYLEDKARCDKSEGANGTKTLLPLCFHPEGGTKQIYYGDGI IGQKISPHYIFSMHGSSVSECVRKDFGEFTFGIKCISRLSAEILYEASKYLNVTGYRFGQVSYQYTALCRSLHSHGAAVG LGGNLPEFLQSINTDVLRKDPVLPFIEQDEWRIVIFTNSLIKNDYNEPLKLIVNPNNFYEYKSSAKLNA
Sequences:
>Translated_229_residues MKDIITEFDRPIVFRTVNAEVYESTINSGSIWLRSSDYYVYLEDKARCDKSEGANGTKTLLPLCFHPEGGTKQIYYGDGI IGQKISPHYIFSMHGSSVSECVRKDFGEFTFGIKCISRLSAEILYEASKYLNVTGYRFGQVSYQYTALCRSLHSHGAAVG LGGNLPEFLQSINTDVLRKDPVLPFIEQDEWRIVIFTNSLIKNDYNEPLKLIVNPNNFYEYKSSAKLNA >Mature_229_residues MKDIITEFDRPIVFRTVNAEVYESTINSGSIWLRSSDYYVYLEDKARCDKSEGANGTKTLLPLCFHPEGGTKQIYYGDGI IGQKISPHYIFSMHGSSVSECVRKDFGEFTFGIKCISRLSAEILYEASKYLNVTGYRFGQVSYQYTALCRSLHSHGAAVG LGGNLPEFLQSINTDVLRKDPVLPFIEQDEWRIVIFTNSLIKNDYNEPLKLIVNPNNFYEYKSSAKLNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25964; Mature: 25964
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIITEFDRPIVFRTVNAEVYESTINSGSIWLRSSDYYVYLEDKARCDKSEGANGTKTL CCCHHHHCCCCEEEEEECHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCEE LPLCFHPEGGTKQIYYGDGIIGQKISPHYIFSMHGSSVSECVRKDFGEFTFGIKCISRLS EEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH AEILYEASKYLNVTGYRFGQVSYQYTALCRSLHSHGAAVGLGGNLPEFLQSINTDVLRKD HHHHHHHHHHEEECCEEECCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCHHHHCCC PVLPFIEQDEWRIVIFTNSLIKNDYNEPLKLIVNPNNFYEYKSSAKLNA CCCCCEECCCEEEEEEECHHHHCCCCCCEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure MKDIITEFDRPIVFRTVNAEVYESTINSGSIWLRSSDYYVYLEDKARCDKSEGANGTKTL CCCHHHHCCCCEEEEEECHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCEE LPLCFHPEGGTKQIYYGDGIIGQKISPHYIFSMHGSSVSECVRKDFGEFTFGIKCISRLS EEEEECCCCCCEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH AEILYEASKYLNVTGYRFGQVSYQYTALCRSLHSHGAAVGLGGNLPEFLQSINTDVLRKD HHHHHHHHHHEEECCEEECCCCHHHHHHHHHHHHCCCEEECCCCHHHHHHHCCHHHHCCC PVLPFIEQDEWRIVIFTNSLIKNDYNEPLKLIVNPNNFYEYKSSAKLNA CCCCCEECCCEEEEEEECHHHHCCCCCCEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA