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The map label for this gene is 119356119

Identifier: 119356119

GI number: 119356119

Start: 304390

End: 305262

Strand: Direct

Name: 119356119

Synonym: Cpha266_0275

Alternate gene names: NA

Gene position: 304390-305262 (Clockwise)

Preceding gene: 119356118

Following gene: 119356120

Centisome position: 9.71

GC content: 42.96

Gene sequence:

>873_bases
GTGCAAGATAAGCGATTGACTTACACGAAATCAGATGCAGCAGATCGGTTGTACGAAGGCTACAATCGGCTTTTGGCCGA
CTCTGACCCAGAGGTCATTCTCCCGCTCGTTCAACATATGGCCTCGGAAGTATTTCCCGATTTCACCGCAATGCAAGCGT
TCTACTCTTTCGCGTGTATGGAGGAAAAACGATTCTTAAAGAAAGCCGAAGTTATTGAGTTGATACCTAAATACTGGTCA
AAAGTGCCAGAAGATATGAGGCCAGACATCAAGTATTTCCTTGAAAATATTGCTTTGGCACCCAGAGTATTCATTAGCTA
CAGTCACGACTCCCAACAGCACAAAGCTTGGGTTTTAAAGTTGGCAACACATTTATCCCAAGCAGGAATCGATATTGTCT
TTGATCAGTGGGATATTGAGCCTGGCAGTGATGTAGCTCTATTTATGGAGCAAGGCATTGAAAAGTCAGATCGAGTAGTT
CTCGTTATTACAGAAAAGTACGTCGAGAAAACAAAGCGCAACGATAGTGGCACTGGCTACGAAAGGATGATAATTACCGG
ACAACTTGCACAAGAGTTGGATACTCATAAGTTTATCCCAATTACACGACAAACATTGGGCAAAATAAAGCTGCCTGTAT
TTTTGGGAAATCGTTTATATGTTGATTTTTCTGACGATGAACTTTTTGAGGACTCATGTCACCGTTTGCTTCGCACACTG
CACGGAGAGCCAGAGGTAGCGAGACCTTCTGTAGGTCCCAACCCTTTTTTAAAGCAACGCCATGAGGCAGCCCAACAGAG
TACTCATTCAAGTTCTGATTCTCAGAATAATTCCACTATCTCTGCTTCTGATGATGAGATATTGACAGAATGA

Upstream 100 bases:

>100_bases
ACCATCGGGTAAACCTGACCGCGAGAACGTCGTCGGCGCTGACGCGATAAAGTTCATTGGCGCGACCAGGTTACCCGAAA
CGTTAGCCAGGAGGTTCATT

Downstream 100 bases:

>100_bases
GAGGCTATCAATGTGCCTCACAATATGGGCTAACAAATCGTTCCAGCGCACCCGCGCCACGAAGCGCCTTGGTGTTTTCG
GGTTTCCTGGGGTGGCGCGG

Product: SEFIR domain-containing protein

Products: NA

Alternate protein names: SEFIR Domain Protein; Protein-Transmembrane Prediction; Sefir Domain-Containing Protein

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQDKRLTYTKSDAADRLYEGYNRLLADSDPEVILPLVQHMASEVFPDFTAMQAFYSFACMEEKRFLKKAEVIELIPKYWS
KVPEDMRPDIKYFLENIALAPRVFISYSHDSQQHKAWVLKLATHLSQAGIDIVFDQWDIEPGSDVALFMEQGIEKSDRVV
LVITEKYVEKTKRNDSGTGYERMIITGQLAQELDTHKFIPITRQTLGKIKLPVFLGNRLYVDFSDDELFEDSCHRLLRTL
HGEPEVARPSVGPNPFLKQRHEAAQQSTHSSSDSQNNSTISASDDEILTE

Sequences:

>Translated_290_residues
MQDKRLTYTKSDAADRLYEGYNRLLADSDPEVILPLVQHMASEVFPDFTAMQAFYSFACMEEKRFLKKAEVIELIPKYWS
KVPEDMRPDIKYFLENIALAPRVFISYSHDSQQHKAWVLKLATHLSQAGIDIVFDQWDIEPGSDVALFMEQGIEKSDRVV
LVITEKYVEKTKRNDSGTGYERMIITGQLAQELDTHKFIPITRQTLGKIKLPVFLGNRLYVDFSDDELFEDSCHRLLRTL
HGEPEVARPSVGPNPFLKQRHEAAQQSTHSSSDSQNNSTISASDDEILTE
>Mature_290_residues
MQDKRLTYTKSDAADRLYEGYNRLLADSDPEVILPLVQHMASEVFPDFTAMQAFYSFACMEEKRFLKKAEVIELIPKYWS
KVPEDMRPDIKYFLENIALAPRVFISYSHDSQQHKAWVLKLATHLSQAGIDIVFDQWDIEPGSDVALFMEQGIEKSDRVV
LVITEKYVEKTKRNDSGTGYERMIITGQLAQELDTHKFIPITRQTLGKIKLPVFLGNRLYVDFSDDELFEDSCHRLLRTL
HGEPEVARPSVGPNPFLKQRHEAAQQSTHSSSDSQNNSTISASDDEILTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33250; Mature: 33250

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50104 TIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDKRLTYTKSDAADRLYEGYNRLLADSDPEVILPLVQHMASEVFPDFTAMQAFYSFACM
CCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EEKRFLKKAEVIELIPKYWSKVPEDMRPDIKYFLENIALAPRVFISYSHDSQQHKAWVLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHH
LATHLSQAGIDIVFDQWDIEPGSDVALFMEQGIEKSDRVVLVITEKYVEKTKRNDSGTGY
HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCCCCCCE
ERMIITGQLAQELDTHKFIPITRQTLGKIKLPVFLGNRLYVDFSDDELFEDSCHRLLRTL
EEEEEEHHHHHHHHCCCCCCHHHHHHCCEECEEEECCEEEEECCCCHHHHHHHHHHHHHH
HGEPEVARPSVGPNPFLKQRHEAAQQSTHSSSDSQNNSTISASDDEILTE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHCCC
>Mature Secondary Structure
MQDKRLTYTKSDAADRLYEGYNRLLADSDPEVILPLVQHMASEVFPDFTAMQAFYSFACM
CCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
EEKRFLKKAEVIELIPKYWSKVPEDMRPDIKYFLENIALAPRVFISYSHDSQQHKAWVLK
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHH
LATHLSQAGIDIVFDQWDIEPGSDVALFMEQGIEKSDRVVLVITEKYVEKTKRNDSGTGY
HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEEHHHHHHHCCCCCCCCE
ERMIITGQLAQELDTHKFIPITRQTLGKIKLPVFLGNRLYVDFSDDELFEDSCHRLLRTL
EEEEEEHHHHHHHHCCCCCCHHHHHHCCEECEEEECCEEEEECCCCHHHHHHHHHHHHHH
HGEPEVARPSVGPNPFLKQRHEAAQQSTHSSSDSQNNSTISASDDEILTE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA