| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is serB [H]
Identifier: 119356097
GI number: 119356097
Start: 279920
End: 281137
Strand: Reverse
Name: serB [H]
Synonym: Cpha266_0250
Alternate gene names: 119356097
Gene position: 281137-279920 (Counterclockwise)
Preceding gene: 119356098
Following gene: 119356096
Centisome position: 8.97
GC content: 57.88
Gene sequence:
>1218_bases ATGAGCGAGCTTCTCCTTATCAATCTTACCGGCCTGGACAAACCGGGTCTGACGTCGAAAATAACGGCGATTCTTGCTGA TGCGAGGGTACCGGTGCTCGATATCGGGCAGGCGGTGATCCATAACCATCTCAGCCTCGGCATGCTGGTTGAGGTGCCCA AGGAGTCGGCTTCGTCGCCCGTTCTCAAAGATCTGCTCTTCTGCGCCCATACGCTCGGCATACAGATTTCCTTTACGCCG GTAGCCGACGAGGAGTACGACCGGTGGGTGGGCGAACAGGGCAAGCCCCGATACCTGCTCTCGCTGCTGTCGAGAAAAAT TTCAGCGGAACAGCTTAAGCGGGTATCGTCGATCGTTGCCGAACATGATCTCAATATCGACACCATCAGCCGCCTTTCAG GCCGAATCCCGCTCGATAACGGCGACAACCACACCCGCGCCTGCGTGGAGTTCTCGCTGAGGGGAACCCTCTCTGACGAA AACCTTTTTCGCGAACAGCTTCTGGCCATTACCGACAGCCTCGGCATCGACATCGCCTTCCAGGAGGACAATATTTTCCG GCGGAACCGGCGCATGGTGGTGTTCGATATGGATTCGACCCTCATCACCTCGGAAGTGATCGACGAACTTGCCCTTGAAG CGGGGGTCGGCGAAGAGGTATCGGCAATTACCGAACAGGCCATGCGGGGGGAACTGGATTTCAACGAAAGCCTGCAGCGG CGGGTGGCGCAGCTCAAGGGGCTTGACGAACATGTGATGGAGAGCATCGCCGCACGGTTGCAGCTCACCGAGGGTGCAGA ACGGCTCTTCGGCAACCTGAAGCGACTCGGCTACAAAACCGCGATTCTTTCCGGAGGGTTCACCTATTTCGGCCACTATC TGCAGAAAAAGCTCTCGATCGACTATGTCTACGCGAACACCCTTGAAATCGAGAACGGCTGCCTGACGGGAAGGGTGCTC GGCAGGGTTGTGGACGGAGCGAGAAAGGCCGAACTGCTCGAACTGCTTGCCGAAAAGGAGAACATCAGCCTTGAACAGAC CGTTGCAGTGGGTGACGGAGCAAACGACCTGCCGATGCTCGGCAAGGCGGGACTCGGCATCGCTTTCAGGGCAAAGCCCA TCGTGCGCGAACGGGCGAAACAGGCGATCTCGACTCTCGGCCTCGACGCCATCCTCTACCTGATGGGGTTCAGGGATCGG GATGAGCTGTCGGAATAG
Upstream 100 bases:
>100_bases TGTCATGGGAGATGACCGCAATAAACGGTTCCATGAGAGTACTGCGAAATGCCTTGTCGATACCGCCTGTTGCGTAGAGC TAACCGTTAACCTCACTGAT
Downstream 100 bases:
>100_bases GATCGCCAGCAAATCATCGACCTGCTCCGCCAAGGCTTTTCCCGGCAGGAAGGCATTTCGGTTGCGTTAAGACTTAATGT CGTTAGCATCAACACTACAC
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MSELLLINLTGLDKPGLTSKITAILADARVPVLDIGQAVIHNHLSLGMLVEVPKESASSPVLKDLLFCAHTLGIQISFTP VADEEYDRWVGEQGKPRYLLSLLSRKISAEQLKRVSSIVAEHDLNIDTISRLSGRIPLDNGDNHTRACVEFSLRGTLSDE NLFREQLLAITDSLGIDIAFQEDNIFRRNRRMVVFDMDSTLITSEVIDELALEAGVGEEVSAITEQAMRGELDFNESLQR RVAQLKGLDEHVMESIAARLQLTEGAERLFGNLKRLGYKTAILSGGFTYFGHYLQKKLSIDYVYANTLEIENGCLTGRVL GRVVDGARKAELLELLAEKENISLEQTVAVGDGANDLPMLGKAGLGIAFRAKPIVRERAKQAISTLGLDAILYLMGFRDR DELSE
Sequences:
>Translated_405_residues MSELLLINLTGLDKPGLTSKITAILADARVPVLDIGQAVIHNHLSLGMLVEVPKESASSPVLKDLLFCAHTLGIQISFTP VADEEYDRWVGEQGKPRYLLSLLSRKISAEQLKRVSSIVAEHDLNIDTISRLSGRIPLDNGDNHTRACVEFSLRGTLSDE NLFREQLLAITDSLGIDIAFQEDNIFRRNRRMVVFDMDSTLITSEVIDELALEAGVGEEVSAITEQAMRGELDFNESLQR RVAQLKGLDEHVMESIAARLQLTEGAERLFGNLKRLGYKTAILSGGFTYFGHYLQKKLSIDYVYANTLEIENGCLTGRVL GRVVDGARKAELLELLAEKENISLEQTVAVGDGANDLPMLGKAGLGIAFRAKPIVRERAKQAISTLGLDAILYLMGFRDR DELSE >Mature_404_residues SELLLINLTGLDKPGLTSKITAILADARVPVLDIGQAVIHNHLSLGMLVEVPKESASSPVLKDLLFCAHTLGIQISFTPV ADEEYDRWVGEQGKPRYLLSLLSRKISAEQLKRVSSIVAEHDLNIDTISRLSGRIPLDNGDNHTRACVEFSLRGTLSDEN LFREQLLAITDSLGIDIAFQEDNIFRRNRRMVVFDMDSTLITSEVIDELALEAGVGEEVSAITEQAMRGELDFNESLQRR VAQLKGLDEHVMESIAARLQLTEGAERLFGNLKRLGYKTAILSGGFTYFGHYLQKKLSIDYVYANTLEIENGCLTGRVLG RVVDGARKAELLELLAEKENISLEQTVAVGDGANDLPMLGKAGLGIAFRAKPIVRERAKQAISTLGLDAILYLMGFRDRD ELSE
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=200, Percent_Identity=33, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1790849, Length=196, Percent_Identity=52.5510204081633, Blast_Score=195, Evalue=6e-51, Organism=Caenorhabditis elegans, GI115534454, Length=231, Percent_Identity=29.8701298701299, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321647, Length=301, Percent_Identity=37.8737541528239, Blast_Score=187, Evalue=2e-48, Organism=Drosophila melanogaster, GI24661601, Length=212, Percent_Identity=30.6603773584906, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 44694; Mature: 44563
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELLLINLTGLDKPGLTSKITAILADARVPVLDIGQAVIHNHLSLGMLVEVPKESASSP CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCH VLKDLLFCAHTLGIQISFTPVADEEYDRWVGEQGKPRYLLSLLSRKISAEQLKRVSSIVA HHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH EHDLNIDTISRLSGRIPLDNGDNHTRACVEFSLRGTLSDENLFREQLLAITDSLGIDIAF HCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE QEDNIFRRNRRMVVFDMDSTLITSEVIDELALEAGVGEEVSAITEQAMRGELDFNESLQR CCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH RVAQLKGLDEHVMESIAARLQLTEGAERLFGNLKRLGYKTAILSGGFTYFGHYLQKKLSI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCE DYVYANTLEIENGCLTGRVLGRVVDGARKAELLELLAEKENISLEQTVAVGDGANDLPML EEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCC GKAGLGIAFRAKPIVRERAKQAISTLGLDAILYLMGFRDRDELSE CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure SELLLINLTGLDKPGLTSKITAILADARVPVLDIGQAVIHNHLSLGMLVEVPKESASSP CCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCH VLKDLLFCAHTLGIQISFTPVADEEYDRWVGEQGKPRYLLSLLSRKISAEQLKRVSSIVA HHHHHHHHHHHHCEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH EHDLNIDTISRLSGRIPLDNGDNHTRACVEFSLRGTLSDENLFREQLLAITDSLGIDIAF HCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE QEDNIFRRNRRMVVFDMDSTLITSEVIDELALEAGVGEEVSAITEQAMRGELDFNESLQR CCCCHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHH RVAQLKGLDEHVMESIAARLQLTEGAERLFGNLKRLGYKTAILSGGFTYFGHYLQKKLSI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCE DYVYANTLEIENGCLTGRVLGRVVDGARKAELLELLAEKENISLEQTVAVGDGANDLPML EEEEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCC GKAGLGIAFRAKPIVRERAKQAISTLGLDAILYLMGFRDRDELSE CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA