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The map label for this gene is nusG [H]

Identifier: 119356075

GI number: 119356075

Start: 253562

End: 254137

Strand: Direct

Name: nusG [H]

Synonym: Cpha266_0228

Alternate gene names: 119356075

Gene position: 253562-254137 (Clockwise)

Preceding gene: 119356074

Following gene: 119356076

Centisome position: 8.09

GC content: 46.18

Gene sequence:

>576_bases
ATGAATACAAGAAAAAAAGCAGTTGAAGAGCAGGGTGTGCCCGGTCCCCGCTGGTATGCGCTGAGGATTTATTCGGGTCA
CGAACGGAAGGTCAAGGAGGGTATCGAGGCTGAGGTTGCCCGGTGTGGTCTTGCTGACAAGATTCTTCAGATCTATGTGC
CTTATGAGCGTTTCGTTGAGGTTAAGAACGGCAAAAAAAGAAGTTTGACGAAAAACGCGTTTCCCGGCTACGTTTTAATA
GAGGCTGTACTTGACAAGCAGACAAGAAACGTGATTCTTGATATGCCGTCAGTTATGGGTTTTCTTGGAGTTGATGATGT
CCCTACCCCTTTGCGTCCTGAAGAGGTGGAGAAAATTCTTGTTACTGAAAATACCGTTGAGCATCGTGCGGTTATCGAGG
CTCCGTTCAGGATAGGCGATTCAGTGAAGGTTATTGATGGCCCATTCAGTTCGTTGACTGGTGTTGTGCATGAGGTTTGT
ACCGAAAGAATGAAGGTTAAGGTGATGATCAGTTTCTTTGGACGCAGCACGCCGACAGAGTTGGATTTTTCACAGGTTAA
ATCAGTTTCCCAATAA

Upstream 100 bases:

>100_bases
GACGGTTTCCGGTATTCTTGCCTTGTTCACCTTTCTTGTCGACTGGGTTATTAATGCTGTTATGGGGCTTTTATTGTAAT
AGCGAGTTGGGGTGCATAAA

Downstream 100 bases:

>100_bases
TCAGGCTTATTGAAACAATAAGCTTCTGAATAGAGATATTTTTATGGCAAAAAAGATAATCGGTTTTATCAAGCTTCAGA
TTCCTGCGGGAGCAGCTAAT

Product: transcription antitermination protein nusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MNTRKKAVEEQGVPGPRWYALRIYSGHERKVKEGIEAEVARCGLADKILQIYVPYERFVEVKNGKKRSLTKNAFPGYVLI
EAVLDKQTRNVILDMPSVMGFLGVDDVPTPLRPEEVEKILVTENTVEHRAVIEAPFRIGDSVKVIDGPFSSLTGVVHEVC
TERMKVKVMISFFGRSTPTELDFSQVKSVSQ

Sequences:

>Translated_191_residues
MNTRKKAVEEQGVPGPRWYALRIYSGHERKVKEGIEAEVARCGLADKILQIYVPYERFVEVKNGKKRSLTKNAFPGYVLI
EAVLDKQTRNVILDMPSVMGFLGVDDVPTPLRPEEVEKILVTENTVEHRAVIEAPFRIGDSVKVIDGPFSSLTGVVHEVC
TERMKVKVMISFFGRSTPTELDFSQVKSVSQ
>Mature_191_residues
MNTRKKAVEEQGVPGPRWYALRIYSGHERKVKEGIEAEVARCGLADKILQIYVPYERFVEVKNGKKRSLTKNAFPGYVLI
EAVLDKQTRNVILDMPSVMGFLGVDDVPTPLRPEEVEKILVTENTVEHRAVIEAPFRIGDSVKVIDGPFSSLTGVVHEVC
TERMKVKVMISFFGRSTPTELDFSQVKSVSQ

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=175, Percent_Identity=37.1428571428571, Blast_Score=129, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21479; Mature: 21479

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTRKKAVEEQGVPGPRWYALRIYSGHERKVKEGIEAEVARCGLADKILQIYVPYERFVE
CCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHEE
VKNGKKRSLTKNAFPGYVLIEAVLDKQTRNVILDMPSVMGFLGVDDVPTPLRPEEVEKIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECHHHHHHCCCCCCCCCCCHHHHHEEH
VTENTVEHRAVIEAPFRIGDSVKVIDGPFSSLTGVVHEVCTERMKVKVMISFFGRSTPTE
HCCCCHHHHHHHHCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
LDFSQVKSVSQ
CCHHHHHHCCC
>Mature Secondary Structure
MNTRKKAVEEQGVPGPRWYALRIYSGHERKVKEGIEAEVARCGLADKILQIYVPYERFVE
CCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHEE
VKNGKKRSLTKNAFPGYVLIEAVLDKQTRNVILDMPSVMGFLGVDDVPTPLRPEEVEKIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECHHHHHHCCCCCCCCCCCHHHHHEEH
VTENTVEHRAVIEAPFRIGDSVKVIDGPFSSLTGVVHEVCTERMKVKVMISFFGRSTPTE
HCCCCHHHHHHHHCCHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC
LDFSQVKSVSQ
CCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]