| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is csmB [H]
Identifier: 119356049
GI number: 119356049
Start: 227469
End: 227696
Strand: Direct
Name: csmB [H]
Synonym: Cpha266_0202
Alternate gene names: 119356049
Gene position: 227469-227696 (Clockwise)
Preceding gene: 119356047
Following gene: 119356050
Centisome position: 7.26
GC content: 45.61
Gene sequence:
>228_bases ATGTCAAACGGAACAAGCAACGATTTTTCTGGAGCTATCACCAATCTGATGGATACGCTCGGTAAACTTGGCCAGCAGCA GGTTGAAATGCTTAACAACGGCATCAAAACCGGCTCCCAAATGATTGAGCCACTTGGCAAAACAGTTACCGATCTTGCCG GTAATATGCTGAACATGGTCAATCAGGTACTGCAGAGCGTTTCTTCAGCTCTTGCTCCGAAAAAGTAA
Upstream 100 bases:
>100_bases CTGAAGAGGAAAATGTGTTAAATTAATTTAAATCCCATAAAGGAGGGTTAAAACTGTTTCAGTTGAATAACTTCTCAATA AACCTAAATCATAACCAGCT
Downstream 100 bases:
>100_bases GCGTTTTTTTGTTTATTGAAGCACCTTATACCTAAAGGATATAAGGTGCTTTTTTTTTGTCCTGCTACAGGAAATCCCTG TTCAGTATCAGGTTTTCGCT
Product: chlorosome envelope protein B
Products: NA
Alternate protein names: Chlorosome 7.5 kDa protein; Gerola-Olson chlorosome protein [H]
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MSNGTSNDFSGAITNLMDTLGKLGQQQVEMLNNGIKTGSQMIEPLGKTVTDLAGNMLNMVNQVLQSVSSALAPKK
Sequences:
>Translated_75_residues MSNGTSNDFSGAITNLMDTLGKLGQQQVEMLNNGIKTGSQMIEPLGKTVTDLAGNMLNMVNQVLQSVSSALAPKK >Mature_74_residues SNGTSNDFSGAITNLMDTLGKLGQQQVEMLNNGIKTGSQMIEPLGKTVTDLAGNMLNMVNQVLQSVSSALAPKK
Specific function: Component of the photosynthetic apparatus which may bind the chlorosome to the bacteriochlorophyll a protein monolayer [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Chlorosome, chlorosome envelope [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsmB/CsmF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7883; Mature: 7752
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGTSNDFSGAITNLMDTLGKLGQQQVEMLNNGIKTGSQMIEPLGKTVTDLAGNMLNMV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NQVLQSVSSALAPKK HHHHHHHHHHHCCCC >Mature Secondary Structure SNGTSNDFSGAITNLMDTLGKLGQQQVEMLNNGIKTGSQMIEPLGKTVTDLAGNMLNMV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NQVLQSVSSALAPKK HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8824146 [H]