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The map label for this gene is 119356047

Identifier: 119356047

GI number: 119356047

Start: 224962

End: 226368

Strand: Direct

Name: 119356047

Synonym: Cpha266_0200

Alternate gene names: NA

Gene position: 224962-226368 (Clockwise)

Preceding gene: 119356040

Following gene: 119356049

Centisome position: 7.18

GC content: 42.43

Gene sequence:

>1407_bases
ATGTGTTCTGTCAGGGTAATCAAAAAACTGAATATCATGCCGCTCAGACTGCTCTTTATCGCTCCAAAAGGGAAAAAAGA
CTCGAAAACCAACCAGAAGCCACTTTTTCACATGGCTATAGGTGTACTTGTAAGTCTAACGCCTGATGAGCATACTATCG
AAATTGCCGACGAACACTTTGGCGATACCATCAACTATGACGGCGATTACGATCTGGTAGGAATCACATCAAGAACGATC
GATGCAACAAGAGCATATGAAATTGCAGATGAGTTTCGGAGAAAAGGAAAAAAAGTTATTCTTGGAGGTCTTCACGTTTC
GTTCAATCCCGAAGAGGCACGTAGTCATGCCGACTCTATTGTTAGCGGCGAAGCAGAAAACCTCTGGGCTACCGTATTGG
AAGATGCCTCATCAGGTCAGTTGAAGCCTGCATACGACTCAAAGGATTTTCCGCTTGTTACAAAAATAGTGCCCCTTGAT
TATGAACGGATTGCACGGGCATCAAAACGGGGAAAAGTTGACGGTTCAAAATCAATCCCCATCTATATCACCAGGGGATG
TCCTTATGAGTGCTCTTTCTGCGTCACACCGAATTTTACCGGAAAACTTTACCGTTATCAGAATCCCGAAGATCTCGTCA
GGCAGATTGAAACCGCAAAAAAGGTTTTTTTCAAGGCAAAAGGAAAATCATCAAAGCCATGGTTCATGCTTTGCGATGAA
AATCTCGGTATCAACAAGAAAAAGCTATGGGAGAACCTTGCACTCCTCAAAGAATGCAATATCAACTACAGCGTTTTCTT
CAGCATGAATTTTCTTGAAGACAAGGAAACCGTAAGACGATTGGTTGATTCAGGATGCAACATGGTACTTGTAGGGTTTG
AATCAATCAAACAAAGCACGCTGGAAGCCTATAACAAAGGGCATGTCAATTCCGCAGAAAAATTTGCAAGTGTAATCGAA
GAGTGCAGAAGTGCCGGGTTGAACATTCAGGGAAATTTCCTTGTCAATCCGGCACTTGACACCTTTGAAGATATGGATGA
TCTTGTCGAGTTTGTCGGTAAAAACCACGTATTCATGCCTATCTTCCAGATCATTACCCCTTACCCGGGAACAAAAATGT
ATTTGGAGTACAAAGAAAAGGGGCTGATAACTGATGAGGATTGGGAGAAATACAACGCCATCAACCTTGTCATCCGGTCT
GAACACTACGATCCAATAGCATTTCAGCACAAGTTTATGACCAGCTATTATAAAACATATTCCTGGGGAAAAATCGCTAA
CAGGGTCAGACGCAATCCCTACAAATTTCTGAATCTCATAACCAGTCTTGCATTCAAGAAAAACCTGAAAGAGCAGCTTG
AAACCTTTGAGCGCAACCACAACATCAGAACAGCAAGAACTCCATAA

Upstream 100 bases:

>100_bases
AGAAATTTTGGTACTTTTTATCCGAAACGCTCCGCGTGTCGGCTTTGTCTGCAGAAAAGTGCAGTGATTTTTTTTGTGCA
GAAAATTCATACAAGGCCTA

Downstream 100 bases:

>100_bases
TCAAGAAATATGCAGGAAACTGTAAACTACACCACACTTTTCGCTCCGGTAGCCTTTTATCTTTCCGGAGTTGTTATTGT
TACACTCATCAACCTGTTTA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MCSVRVIKKLNIMPLRLLFIAPKGKKDSKTNQKPLFHMAIGVLVSLTPDEHTIEIADEHFGDTINYDGDYDLVGITSRTI
DATRAYEIADEFRRKGKKVILGGLHVSFNPEEARSHADSIVSGEAENLWATVLEDASSGQLKPAYDSKDFPLVTKIVPLD
YERIARASKRGKVDGSKSIPIYITRGCPYECSFCVTPNFTGKLYRYQNPEDLVRQIETAKKVFFKAKGKSSKPWFMLCDE
NLGINKKKLWENLALLKECNINYSVFFSMNFLEDKETVRRLVDSGCNMVLVGFESIKQSTLEAYNKGHVNSAEKFASVIE
ECRSAGLNIQGNFLVNPALDTFEDMDDLVEFVGKNHVFMPIFQIITPYPGTKMYLEYKEKGLITDEDWEKYNAINLVIRS
EHYDPIAFQHKFMTSYYKTYSWGKIANRVRRNPYKFLNLITSLAFKKNLKEQLETFERNHNIRTARTP

Sequences:

>Translated_468_residues
MCSVRVIKKLNIMPLRLLFIAPKGKKDSKTNQKPLFHMAIGVLVSLTPDEHTIEIADEHFGDTINYDGDYDLVGITSRTI
DATRAYEIADEFRRKGKKVILGGLHVSFNPEEARSHADSIVSGEAENLWATVLEDASSGQLKPAYDSKDFPLVTKIVPLD
YERIARASKRGKVDGSKSIPIYITRGCPYECSFCVTPNFTGKLYRYQNPEDLVRQIETAKKVFFKAKGKSSKPWFMLCDE
NLGINKKKLWENLALLKECNINYSVFFSMNFLEDKETVRRLVDSGCNMVLVGFESIKQSTLEAYNKGHVNSAEKFASVIE
ECRSAGLNIQGNFLVNPALDTFEDMDDLVEFVGKNHVFMPIFQIITPYPGTKMYLEYKEKGLITDEDWEKYNAINLVIRS
EHYDPIAFQHKFMTSYYKTYSWGKIANRVRRNPYKFLNLITSLAFKKNLKEQLETFERNHNIRTARTP
>Mature_468_residues
MCSVRVIKKLNIMPLRLLFIAPKGKKDSKTNQKPLFHMAIGVLVSLTPDEHTIEIADEHFGDTINYDGDYDLVGITSRTI
DATRAYEIADEFRRKGKKVILGGLHVSFNPEEARSHADSIVSGEAENLWATVLEDASSGQLKPAYDSKDFPLVTKIVPLD
YERIARASKRGKVDGSKSIPIYITRGCPYECSFCVTPNFTGKLYRYQNPEDLVRQIETAKKVFFKAKGKSSKPWFMLCDE
NLGINKKKLWENLALLKECNINYSVFFSMNFLEDKETVRRLVDSGCNMVLVGFESIKQSTLEAYNKGHVNSAEKFASVIE
ECRSAGLNIQGNFLVNPALDTFEDMDDLVEFVGKNHVFMPIFQIITPYPGTKMYLEYKEKGLITDEDWEKYNAINLVIRS
EHYDPIAFQHKFMTSYYKTYSWGKIANRVRRNPYKFLNLITSLAFKKNLKEQLETFERNHNIRTARTP

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53646; Mature: 53646

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSVRVIKKLNIMPLRLLFIAPKGKKDSKTNQKPLFHMAIGVLVSLTPDEHTIEIADEHF
CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHEECCCCCCEEEECHHHC
GDTINYDGDYDLVGITSRTIDATRAYEIADEFRRKGKKVILGGLHVSFNPEEARSHADSI
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHHHH
VSGEAENLWATVLEDASSGQLKPAYDSKDFPLVTKIVPLDYERIARASKRGKVDGSKSIP
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC
IYITRGCPYECSFCVTPNFTGKLYRYQNPEDLVRQIETAKKVFFKAKGKSSKPWFMLCDE
EEEECCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEECCCCCCCEEEEECC
NLGINKKKLWENLALLKECNINYSVFFSMNFLEDKETVRRLVDSGCNMVLVGFESIKQST
CCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEHHHHHHHH
LEAYNKGHVNSAEKFASVIEECRSAGLNIQGNFLVNPALDTFEDMDDLVEFVGKNHVFMP
HHHHCCCCCCHHHHHHHHHHHHHHCCCCEECCEEECCCHHHHHHHHHHHHHHCCCCCHHH
IFQIITPYPGTKMYLEYKEKGLITDEDWEKYNAINLVIRSEHYDPIAFQHKFMTSYYKTY
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
SWGKIANRVRRNPYKFLNLITSLAFKKNLKEQLETFERNHNIRTARTP
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
>Mature Secondary Structure
MCSVRVIKKLNIMPLRLLFIAPKGKKDSKTNQKPLFHMAIGVLVSLTPDEHTIEIADEHF
CCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHEECCCCCCEEEECHHHC
GDTINYDGDYDLVGITSRTIDATRAYEIADEFRRKGKKVILGGLHVSFNPEEARSHADSI
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECHHHHHHHHHHH
VSGEAENLWATVLEDASSGQLKPAYDSKDFPLVTKIVPLDYERIARASKRGKVDGSKSIP
HCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCC
IYITRGCPYECSFCVTPNFTGKLYRYQNPEDLVRQIETAKKVFFKAKGKSSKPWFMLCDE
EEEECCCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHEEECCCCCCCEEEEECC
NLGINKKKLWENLALLKECNINYSVFFSMNFLEDKETVRRLVDSGCNMVLVGFESIKQST
CCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEEEEHHHHHHHH
LEAYNKGHVNSAEKFASVIEECRSAGLNIQGNFLVNPALDTFEDMDDLVEFVGKNHVFMP
HHHHCCCCCCHHHHHHHHHHHHHHCCCCEECCEEECCCHHHHHHHHHHHHHHCCCCCHHH
IFQIITPYPGTKMYLEYKEKGLITDEDWEKYNAINLVIRSEHYDPIAFQHKFMTSYYKTY
HHHHHCCCCCCEEEEEECCCCCCCCCCHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
SWGKIANRVRRNPYKFLNLITSLAFKKNLKEQLETFERNHNIRTARTP
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]