| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356034
Identifier: 119356034
GI number: 119356034
Start: 212717
End: 213394
Strand: Direct
Name: 119356034
Synonym: Cpha266_0187
Alternate gene names: NA
Gene position: 212717-213394 (Clockwise)
Preceding gene: 119356020
Following gene: 119356035
Centisome position: 6.79
GC content: 44.1
Gene sequence:
>678_bases GTGAAAAAAGAGCATGCAACAATATCAGGGAGAAAGAAACGTTTTTGTGTAATCATGGAAGTTGTAGGAAAAAGTAAAGC ATTGGTCGTTCTTGAGTCATGCCTGCAGGAATCGACTGTTTATTTCTCAAATCACGAGAAAATCCTGAAATGCAATCCGT ACTGCAGATATGTACGCTATATACCGGATTTCGATGTTTTTCAATGGACCTTCGAGGTTGACGATCCTCGAAATAACCCG ATCGTAGCAATCTTTTTTGTCAGACAGACCGAAGAGCATATACCGACAGACAGTGCAGTTTTCAGGCGCTACGTCGGTGA AAGCCGGGCTCCCATCGATACAGAGACCCCCGGGAAAAAAATTATCTGGGAAACCGTCGAGTCGGCCCCGGAACTGCTTT TTAACAACGACCATACCTTCATCGGCAAAACTTTTTCTGAAATTTTCCTTCTTCACCAGACAGACAATCGGACGACCGTT CATTTCGAAACAAATATATCGCTGGATTTCAAACTGTCATTTCCGCTCAATCTCATGCCGGAACCGGCACTGAAATTCAT GAGCGATATGATTATGTCGAAAATCATGCAGCAGGCAACCGAAAGCATGCTTTGTCAGGTTCAGTCGGATATCTGCTGCT CTATGCCTGAAATTGCCACCGAAGGTGGAAAGAAATAG
Upstream 100 bases:
>100_bases TAAACCTGTTTATCATGAACACTCAGTCAGCAAATGTCCGTTCATCCTGAGCTGAATCGGGCTCCCACTGAAAAAAAACG AATTATAGGGCCTGATCAGA
Downstream 100 bases:
>100_bases ACAGAAAAGATGGCAAGACAGGGTTTGTCTGACCGCAGTATGATTTTCAGCATAAGTTATCATGTACCGAGCACAAAGCC CCCTTGAAATAAAGGCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MKKEHATISGRKKRFCVIMEVVGKSKALVVLESCLQESTVYFSNHEKILKCNPYCRYVRYIPDFDVFQWTFEVDDPRNNP IVAIFFVRQTEEHIPTDSAVFRRYVGESRAPIDTETPGKKIIWETVESAPELLFNNDHTFIGKTFSEIFLLHQTDNRTTV HFETNISLDFKLSFPLNLMPEPALKFMSDMIMSKIMQQATESMLCQVQSDICCSMPEIATEGGKK
Sequences:
>Translated_225_residues MKKEHATISGRKKRFCVIMEVVGKSKALVVLESCLQESTVYFSNHEKILKCNPYCRYVRYIPDFDVFQWTFEVDDPRNNP IVAIFFVRQTEEHIPTDSAVFRRYVGESRAPIDTETPGKKIIWETVESAPELLFNNDHTFIGKTFSEIFLLHQTDNRTTV HFETNISLDFKLSFPLNLMPEPALKFMSDMIMSKIMQQATESMLCQVQSDICCSMPEIATEGGKK >Mature_225_residues MKKEHATISGRKKRFCVIMEVVGKSKALVVLESCLQESTVYFSNHEKILKCNPYCRYVRYIPDFDVFQWTFEVDDPRNNP IVAIFFVRQTEEHIPTDSAVFRRYVGESRAPIDTETPGKKIIWETVESAPELLFNNDHTFIGKTFSEIFLLHQTDNRTTV HFETNISLDFKLSFPLNLMPEPALKFMSDMIMSKIMQQATESMLCQVQSDICCSMPEIATEGGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25980; Mature: 25980
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEHATISGRKKRFCVIMEVVGKSKALVVLESCLQESTVYFSNHEKILKCNPYCRYVRY CCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHCEEEECCCCEEEEECCHHEEEEE IPDFDVFQWTFEVDDPRNNPIVAIFFVRQTEEHIPTDSAVFRRYVGESRAPIDTETPGKK CCCCCEEEEEEEECCCCCCCEEEEEEEEECHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH IIWETVESAPELLFNNDHTFIGKTFSEIFLLHQTDNRTTVHFETNISLDFKLSFPLNLMP HHHHHHHHHHHHEECCCCCEECCCHHHEEEEEECCCCEEEEEEECEEEEEEEECCCCCCC EPALKFMSDMIMSKIMQQATESMLCQVQSDICCSMPEIATEGGKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC >Mature Secondary Structure MKKEHATISGRKKRFCVIMEVVGKSKALVVLESCLQESTVYFSNHEKILKCNPYCRYVRY CCCCCCCCCCCCCCEEEEEEHHCCCHHHHHHHHHHHHCEEEECCCCEEEEECCHHEEEEE IPDFDVFQWTFEVDDPRNNPIVAIFFVRQTEEHIPTDSAVFRRYVGESRAPIDTETPGKK CCCCCEEEEEEEECCCCCCCEEEEEEEEECHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH IIWETVESAPELLFNNDHTFIGKTFSEIFLLHQTDNRTTVHFETNISLDFKLSFPLNLMP HHHHHHHHHHHHEECCCCCEECCCHHHEEEEEECCCCEEEEEEECEEEEEEEECCCCCCC EPALKFMSDMIMSKIMQQATESMLCQVQSDICCSMPEIATEGGKK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA