| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is gloB [H]
Identifier: 119356026
GI number: 119356026
Start: 204591
End: 205232
Strand: Reverse
Name: gloB [H]
Synonym: Cpha266_0179
Alternate gene names: 119356026
Gene position: 205232-204591 (Counterclockwise)
Preceding gene: 119356027
Following gene: 119356025
Centisome position: 6.55
GC content: 51.4
Gene sequence:
>642_bases ATGATCATCAAACAATTCCGAACGGGCGGCGACAGAAACTTAGGCTACCTTGCCGCTGACGAAGTTTCCGGTGACGCTCT GGTCGTTGACGCATCCTATAATCCAGGCATGATATACAATTTTGCCTGTGAACACGGATTGACGATTCGATACCTCTTTT CAACACATGGCCACAGCGATCATACCAACGGAAACGCCACGACAAGTCAACTAACCGGCCTCAAACCCCTTCTCTATGGC GACACGTGCCCTGAAACGGGAATCAGTGTTCGCGCCGGAGCACGATTCCCGCTTGGCTCCGGGAGCGTGCTGATCATACA TACCCCGGGCCACACCGAAGACTCGATCTGCCTGCATGTCGGAGACGCACTCTTTACCGGCGACACGCTTTTCACCGGAA AAGTAGGAGGAACCATGACCGCGGAACAGGCTCTTGCGGAATACGATTCACTGCGCAACAAGCTCATGCGCCTGCCTGAC GAAACAAGAGTTTTTCCGGGACACGATTATGGAAGTTCACCGGCATCAACCATTGCAGAAGAAAAAAAGTCCAATCCGTT CCTTCTGCAGCCCGATTTCAGATCATTTCTTGCACTCAAACAGAACTGGGCTGCATATAAAAAAGAGCATGGCATAGCAT AA
Upstream 100 bases:
>100_bases TGAAAAAAACCCGATTGCCGTTGACAAGGATTTTCCTGCCAGAGCATTTCTTATGCATGTAGAAAAAACAGCCTGACCGT TTTACCGGAGCAAAAAAATC
Downstream 100 bases:
>100_bases GGGGGATAGCGATGTTGCGAAATTATATTTTTTTTTACTAAATTGATTTTTTGTACCCTTCGGGTGATTGAGAGGGCATT CCTGCCTTGTCCAGCTTTCA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MIIKQFRTGGDRNLGYLAADEVSGDALVVDASYNPGMIYNFACEHGLTIRYLFSTHGHSDHTNGNATTSQLTGLKPLLYG DTCPETGISVRAGARFPLGSGSVLIIHTPGHTEDSICLHVGDALFTGDTLFTGKVGGTMTAEQALAEYDSLRNKLMRLPD ETRVFPGHDYGSSPASTIAEEKKSNPFLLQPDFRSFLALKQNWAAYKKEHGIA
Sequences:
>Translated_213_residues MIIKQFRTGGDRNLGYLAADEVSGDALVVDASYNPGMIYNFACEHGLTIRYLFSTHGHSDHTNGNATTSQLTGLKPLLYG DTCPETGISVRAGARFPLGSGSVLIIHTPGHTEDSICLHVGDALFTGDTLFTGKVGGTMTAEQALAEYDSLRNKLMRLPD ETRVFPGHDYGSSPASTIAEEKKSNPFLLQPDFRSFLALKQNWAAYKKEHGIA >Mature_213_residues MIIKQFRTGGDRNLGYLAADEVSGDALVVDASYNPGMIYNFACEHGLTIRYLFSTHGHSDHTNGNATTSQLTGLKPLLYG DTCPETGISVRAGARFPLGSGSVLIIHTPGHTEDSICLHVGDALFTGDTLFTGKVGGTMTAEQALAEYDSLRNKLMRLPD ETRVFPGHDYGSSPASTIAEEKKSNPFLLQPDFRSFLALKQNWAAYKKEHGIA
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=170, Percent_Identity=33.5294117647059, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI94538322, Length=170, Percent_Identity=33.5294117647059, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI41327741, Length=204, Percent_Identity=29.9019607843137, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538952, Length=219, Percent_Identity=26.4840182648402, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320478, Length=187, Percent_Identity=28.8770053475936, Blast_Score=79, Evalue=7e-16, Organism=Drosophila melanogaster, GI221330176, Length=210, Percent_Identity=27.6190476190476, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356335, Length=219, Percent_Identity=31.9634703196347, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24667703, Length=219, Percent_Identity=31.5068493150685, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI24667711, Length=219, Percent_Identity=31.9634703196347, Blast_Score=80, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 23053; Mature: 23053
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIKQFRTGGDRNLGYLAADEVSGDALVVDASYNPGMIYNFACEHGLTIRYLFSTHGHSD CCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCC HTNGNATTSQLTGLKPLLYGDTCPETGISVRAGARFPLGSGSVLIIHTPGHTEDSICLHV CCCCCCCHHHHCCCCCEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEE GDALFTGDTLFTGKVGGTMTAEQALAEYDSLRNKLMRLPDETRVFPGHDYGSSPASTIAE CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCHHHHHHH EKKSNPFLLQPDFRSFLALKQNWAAYKKEHGIA HHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIIKQFRTGGDRNLGYLAADEVSGDALVVDASYNPGMIYNFACEHGLTIRYLFSTHGHSD CCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEEECCCCCC HTNGNATTSQLTGLKPLLYGDTCPETGISVRAGARFPLGSGSVLIIHTPGHTEDSICLHV CCCCCCCHHHHCCCCCEEECCCCCCCCCEEECCCCCCCCCCCEEEEECCCCCCCCEEEEE GDALFTGDTLFTGKVGGTMTAEQALAEYDSLRNKLMRLPDETRVFPGHDYGSSPASTIAE CCEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCCCCCHHHHHHH EKKSNPFLLQPDFRSFLALKQNWAAYKKEHGIA HHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA