| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356018
Identifier: 119356018
GI number: 119356018
Start: 193428
End: 193844
Strand: Direct
Name: 119356018
Synonym: Cpha266_0171
Alternate gene names: NA
Gene position: 193428-193844 (Clockwise)
Preceding gene: 119356013
Following gene: 119356020
Centisome position: 6.17
GC content: 54.68
Gene sequence:
>417_bases ATGAAACGTGTTTTTATTGGGCTGGTTACTGGTTTGCTCTGTTTTCCTGTCGCTCAGAGTCGCGCTGCGACTCCTGATGG AAAAGAGGTGTTTGAGAGAAACTGCAGCGTTTGTCATTCGGTCAACCCGCCCTCGAAAAGCGCTCCGCCGATTCTGCCGA TTTCGGGCAGATATCACATGCAGTTTTCAACGAAAAGTGCCGGTGTCGCTGCTATGGCTGCATTCATGAAAGCTCCTTCA AAGCAGAAGTCCGTTATTGAGCCGGAGGCAATTACTCGTTTCGGGCTTATGCCTCCGATGGCTCTTGGTGATGCGGAGCT GACCGCTGTAGCGGGATGGGTCTGGGATCAGGGCGGCAGCGCTTCAGGCCGCGGATCGGGTCGAGGTGCCGGACAAGGTG CCGGTGGTTGCAATTAA
Upstream 100 bases:
>100_bases GATTCGATTTCTCTTCGATCTTATTTTTTGCTTACTTTCAGGGTGTTTGTATGTTTACGAAAAGAGCTGTTTTTACCTAA TATTGACGATCTTTTTTGCT
Downstream 100 bases:
>100_bases GCCTGATATCGGTTTCGGACGGAATAAAAAAGCTCTCCCTTTACGAAGGGGAGAGCTTTGGCTTTCGTGTCGTCTTTACC GCGGTACCCTTGGGCAGACT
Product: C-type cytochrome, putative
Products: NA
Alternate protein names: C-Type Cytochrome; Cytochrome C
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKRVFIGLVTGLLCFPVAQSRAATPDGKEVFERNCSVCHSVNPPSKSAPPILPISGRYHMQFSTKSAGVAAMAAFMKAPS KQKSVIEPEAITRFGLMPPMALGDAELTAVAGWVWDQGGSASGRGSGRGAGQGAGGCN
Sequences:
>Translated_138_residues MKRVFIGLVTGLLCFPVAQSRAATPDGKEVFERNCSVCHSVNPPSKSAPPILPISGRYHMQFSTKSAGVAAMAAFMKAPS KQKSVIEPEAITRFGLMPPMALGDAELTAVAGWVWDQGGSASGRGSGRGAGQGAGGCN >Mature_138_residues MKRVFIGLVTGLLCFPVAQSRAATPDGKEVFERNCSVCHSVNPPSKSAPPILPISGRYHMQFSTKSAGVAAMAAFMKAPS KQKSVIEPEAITRFGLMPPMALGDAELTAVAGWVWDQGGSASGRGSGRGAGQGAGGCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14237; Mature: 14237
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVFIGLVTGLLCFPVAQSRAATPDGKEVFERNCSVCHSVNPPSKSAPPILPISGRYHM CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCEEECCCEEEE QFSTKSAGVAAMAAFMKAPSKQKSVIEPEAITRFGLMPPMALGDAELTAVAGWVWDQGGS EECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHEEECCCCC ASGRGSGRGAGQGAGGCN CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRVFIGLVTGLLCFPVAQSRAATPDGKEVFERNCSVCHSVNPPSKSAPPILPISGRYHM CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCEEECCCEEEE QFSTKSAGVAAMAAFMKAPSKQKSVIEPEAITRFGLMPPMALGDAELTAVAGWVWDQGGS EECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHEEECCCCC ASGRGSGRGAGQGAGGCN CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA