| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119356016
Identifier: 119356016
GI number: 119356016
Start: 191334
End: 192296
Strand: Reverse
Name: 119356016
Synonym: Cpha266_0169
Alternate gene names: NA
Gene position: 192296-191334 (Counterclockwise)
Preceding gene: 119356017
Following gene: 119356015
Centisome position: 6.14
GC content: 49.53
Gene sequence:
>963_bases ATGAACCTTCAACTTGGTCAAGCCATAAAAATCGTTGCGCAAACAAAGGTCTATCTGCTCTACCGCACGATGGTTTACGG AGCCATTGTCGGTGTCGTTGCGATTGTTCTTGGCATACTGGTGCTGATCGGCACTGTTTTCGGAAGCGGAGCAGCCTTTG TACTCTTTCTCATAACATTATTTGCCGGCAGCTTCGGCTTCAGACTGCTGCGCGACTATGTTCTCTACCTCCTGCAGGCC GGCCATATTGCCCTGATTACAGAAATAGCCGAAACCGGAACCCTCCCTCCGGGAATTTCCCAGACGTCATGGGCAAAAGA AAAGGTAATGAAATACTATAAAGAGGTAAGTGTACTGGCCCTTGTCGACCAGTTGGTCAAAGGTGTGCTTGTCACGTTAA ACCGCACAATCTTCAACGTTTTCAACGCGCTGCCCATACCCGCACTGGAAGGATTGGCCGGCATCGTGCAACGCATCGTC AATTTCAGTCTCACCTATATTGACGAATCAGTTATTGCCTACACCTTCCGAACCAGAAACGAGAACGTCTTTGATGCAGC GAAATCAGGCATACTTGTCTACTGCCAATCATGGAAAGCCGTCCTGATGAATGCCGTCGCGCTTACCGTTCTCAGCTATC TCTTTGTCATTCTGATGACCACCCTGTTCATGATTCCCCTTGGGGCAGTCTCCCTGATGCTGCCTTCCTCATGGTCATTC GTCAAGTTCGCGCTCTTTGTGCTGGCGCTTTTTCTCGGCATATCGACAAAATGGATTCTCTTCGACCCGATTGCCTGTAC ATCGACCCTGCTAACCTTTCTGAATGAAGCCGAAACAACAAAACCCGACCCGGCATGGGAATCTAAAATCGAAATGGTCA GCGACCAGTTCCGAACCCTGAAAACAAAAGCCGGAGAGATGATGCGAGGAACAGCAAAGAGCCGCGAAGCCCAATCAACG TAA
Upstream 100 bases:
>100_bases CCCCGGGCAAAAAGAAAACACGGCGATCCCCGATTCGCCGAACAGCGAAAAACAGCCATAACGTCACAACAAAAAACAAC ACAAACGAGGAACCCGGATC
Downstream 100 bases:
>100_bases AGGCACCGCTGAAATATCAGCGATTTCACCCATGGCGCCATGATCAGTTCTGGCGCCTGAACCAAACTCAACAAACCCAC ACCAAAGGATCTCTTCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNLQLGQAIKIVAQTKVYLLYRTMVYGAIVGVVAIVLGILVLIGTVFGSGAAFVLFLITLFAGSFGFRLLRDYVLYLLQA GHIALITEIAETGTLPPGISQTSWAKEKVMKYYKEVSVLALVDQLVKGVLVTLNRTIFNVFNALPIPALEGLAGIVQRIV NFSLTYIDESVIAYTFRTRNENVFDAAKSGILVYCQSWKAVLMNAVALTVLSYLFVILMTTLFMIPLGAVSLMLPSSWSF VKFALFVLALFLGISTKWILFDPIACTSTLLTFLNEAETTKPDPAWESKIEMVSDQFRTLKTKAGEMMRGTAKSREAQST
Sequences:
>Translated_320_residues MNLQLGQAIKIVAQTKVYLLYRTMVYGAIVGVVAIVLGILVLIGTVFGSGAAFVLFLITLFAGSFGFRLLRDYVLYLLQA GHIALITEIAETGTLPPGISQTSWAKEKVMKYYKEVSVLALVDQLVKGVLVTLNRTIFNVFNALPIPALEGLAGIVQRIV NFSLTYIDESVIAYTFRTRNENVFDAAKSGILVYCQSWKAVLMNAVALTVLSYLFVILMTTLFMIPLGAVSLMLPSSWSF VKFALFVLALFLGISTKWILFDPIACTSTLLTFLNEAETTKPDPAWESKIEMVSDQFRTLKTKAGEMMRGTAKSREAQST >Mature_320_residues MNLQLGQAIKIVAQTKVYLLYRTMVYGAIVGVVAIVLGILVLIGTVFGSGAAFVLFLITLFAGSFGFRLLRDYVLYLLQA GHIALITEIAETGTLPPGISQTSWAKEKVMKYYKEVSVLALVDQLVKGVLVTLNRTIFNVFNALPIPALEGLAGIVQRIV NFSLTYIDESVIAYTFRTRNENVFDAAKSGILVYCQSWKAVLMNAVALTVLSYLFVILMTTLFMIPLGAVSLMLPSSWSF VKFALFVLALFLGISTKWILFDPIACTSTLLTFLNEAETTKPDPAWESKIEMVSDQFRTLKTKAGEMMRGTAKSREAQST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35246; Mature: 35246
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQLGQAIKIVAQTKVYLLYRTMVYGAIVGVVAIVLGILVLIGTVFGSGAAFVLFLITL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FAGSFGFRLLRDYVLYLLQAGHIALITEIAETGTLPPGISQTSWAKEKVMKYYKEVSVLA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LVDQLVKGVLVTLNRTIFNVFNALPIPALEGLAGIVQRIVNFSLTYIDESVIAYTFRTRN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC ENVFDAAKSGILVYCQSWKAVLMNAVALTVLSYLFVILMTTLFMIPLGAVSLMLPSSWSF CCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VKFALFVLALFLGISTKWILFDPIACTSTLLTFLNEAETTKPDPAWESKIEMVSDQFRTL HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KTKAGEMMRGTAKSREAQST HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLQLGQAIKIVAQTKVYLLYRTMVYGAIVGVVAIVLGILVLIGTVFGSGAAFVLFLITL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FAGSFGFRLLRDYVLYLLQAGHIALITEIAETGTLPPGISQTSWAKEKVMKYYKEVSVLA HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH LVDQLVKGVLVTLNRTIFNVFNALPIPALEGLAGIVQRIVNFSLTYIDESVIAYTFRTRN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC ENVFDAAKSGILVYCQSWKAVLMNAVALTVLSYLFVILMTTLFMIPLGAVSLMLPSSWSF CCHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VKFALFVLALFLGISTKWILFDPIACTSTLLTFLNEAETTKPDPAWESKIEMVSDQFRTL HHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KTKAGEMMRGTAKSREAQST HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA