Click here to switch to the map view.

The map label for this gene is cooS1 [H]

Identifier: 119355999

GI number: 119355999

Start: 168834

End: 170876

Strand: Direct

Name: cooS1 [H]

Synonym: Cpha266_0149

Alternate gene names: 119355999

Gene position: 168834-170876 (Clockwise)

Preceding gene: 119355998

Following gene: 119356000

Centisome position: 5.39

GC content: 54.23

Gene sequence:

>2043_bases
ATGTCGCTTAAAGAGAGGATCAAGCTTGTTCACCGGCTTAACTACAGCAAGGAGGAGGTGATAAAGCATACGGCCAATAA
AGCCGTAGCCGAGATGGTTGAACATATGGACAAGGAGGCGATCAGCAATACCTTTGATCGCTTTGCGCAGCAGCATCCGC
AATGCGGCTACGGACTTACCGGCGCGTGCTGCGCCTTCTGCTCTTACGGGCCCTGCCGGGTAACGGAAAAAACGCTCTAT
TCGGTTTGCGGCAAGGATGTCGATCTCATCGTGGCAGGCAATGCCCTGCGACGTCTTGCCTCCGGTATGGCAGCGCATGG
CGCACATGCGAGGGAGGTATTTATCGCCCTCAAAGCGGCGGCGGAAGGCAGCGCTCCCATCCCGATCAAATGCCCGGAAA
AAGGGGTCGCCGTAGCGCGGGCGCTCGGCATTGAAACGGAGGGAAAAACCATTGAGGCCATCTGTGGAGAGATTGCCGAT
ATTTTCATTGACGATCTGCAGCGCTCGCTTCCCAAAAGGCACGAGACGCTCCATGCGCTTGCGCCGAAAGAGCGCGCGGA
GCTGTGGGAAAGGCTCGGCATCATACCAATCAGTGCCTATCACGAGTGTTTCGAGGTCAATAATCTTACCAGTCACGGCA
CCGATTCCGATTTTGAAAGCCATATGCAGGCTTTTCTTCGAACGGTTCTTGCCTATGCCATCACCACCGTTACCAGCACG
TCGCTTGCCACCGATATTGTCTACGGGCTTCCCCGGCGTTCAAAGCTCAATGTCAATCTCGGCAGCATTGTTCCTGACGG
CTGCGTCAACATCGGCATCAACGGGCACGCACCGATGGTCGCCTTTGCTATCTGCGATATTGTCGGCACGCCGAAAATCA
TGGAAAAGGTAAAGAGAGCCGGTGCGGATACTATCAGGCTGTACGGCATGTGTTGTACCGGCGGAGAGTTTATTGAACGC
GACCTCAACATCCCTCTTGTCGCCATGGCCTCTTCGGCTGAGATGGCGGTTGCTACAGGCGCATTTGATGCCATCGTTGT
TGATCAGCAGGATGTGCTGCCGGGAATGATGCACGTAGCCCGTCAGTTTCATACCAGGGTCATCACCACCTCGCCTTCCG
GACGGAAAGAGGGGGCGATTGTGCTTGAACTTGACTACTACCTGAAGAATCTCGATAAAATCTATGAGCTTGCCGAAGAG
ATTCTCGATATCGCCATTGATAATTATCGCAACAGGGAGAGTAAAAAAGTTCATGTGCCCAATATCAGGGCAAAGGTTGA
GCTTGGGTTCAGCGTTGAAGAGGTCATGAAGCTCTTTAACGGTTCGATGCCCGATAAAAAAATACATGGTCTCGCAGCGC
TTCTCAAAGCCGGAAAAATCCGGGGTATCGTGAACTTCGGATCATGCGGCAACGTTCGCGGCGCCGTGTTCGAGAGGAAC
CAGATCATTATTGCCAAACAGCTCATAAAAAATGATGTGCTGGTCACTGCCCATGGCTGCTCAGGAATGGGGCTCCTCTT
TGCCGGCCTTGCTCACCCCGACGCCTCCGTGTTATGCGGCACAGGGCTGCGGGAGGTAGTGCAGGCCAAGGATATTCCCC
CGGTTCTGCATGTCGGCGCCTGTACTGACAGCACCAGAGCCAGTCAGATCATGGCTTATACGGCCAATGCCGCCGCACAG
CCCAATCCTGCCATGCCGTTTGCCATGGTTGCAGCCGATCCGGCAGCGGAAAAAACCATGGGCGCGAGGTACGCCTTTGT
TCTTAACGGCATCGAAACCTACTCCTGCGTGCAGGACAACACGCTGGCTTCGGATCGATTTATCGATTACGTCAGCAACA
GGCTGCGGACGATCGTCGGCGCGGCAATGAACTGGAACCCCGATCCCTATCGTACCAGCGAAGATATTCTCTGCATGCTT
GACGAGAAACGAGCCGCTCTTGGATGGCCGGTTCGTGACTATACGATAGGGACAAAAGAGGAGATAGAGGACAAGATTCC
CGATACCGTTGAAATCGGTCGCTCGATCTGTACGATCATCTGA

Upstream 100 bases:

>100_bases
ATGAATCAACTAACCCCGCAGGATTATGGCCGAAGAGAGAATATACCGATACGATGACGAACTGACCGGTTCGCGCAACG
CTCCGCAGTATCAGCCGGGA

Downstream 100 bases:

>100_bases
ACCGGAAAAGCGTTGTATGAACGGTCAATAACTCAGCAAAAGGAGAAAACAGGCATGCTGTTCGATTGTGAAAAACAGGC
AATGGAGCGATGGACGATTG

Product: carbon-monoxide dehydrogenase (acceptor)

Products: NA

Alternate protein names: CODH 1 [H]

Number of amino acids: Translated: 680; Mature: 679

Protein sequence:

>680_residues
MSLKERIKLVHRLNYSKEEVIKHTANKAVAEMVEHMDKEAISNTFDRFAQQHPQCGYGLTGACCAFCSYGPCRVTEKTLY
SVCGKDVDLIVAGNALRRLASGMAAHGAHAREVFIALKAAAEGSAPIPIKCPEKGVAVARALGIETEGKTIEAICGEIAD
IFIDDLQRSLPKRHETLHALAPKERAELWERLGIIPISAYHECFEVNNLTSHGTDSDFESHMQAFLRTVLAYAITTVTST
SLATDIVYGLPRRSKLNVNLGSIVPDGCVNIGINGHAPMVAFAICDIVGTPKIMEKVKRAGADTIRLYGMCCTGGEFIER
DLNIPLVAMASSAEMAVATGAFDAIVVDQQDVLPGMMHVARQFHTRVITTSPSGRKEGAIVLELDYYLKNLDKIYELAEE
ILDIAIDNYRNRESKKVHVPNIRAKVELGFSVEEVMKLFNGSMPDKKIHGLAALLKAGKIRGIVNFGSCGNVRGAVFERN
QIIIAKQLIKNDVLVTAHGCSGMGLLFAGLAHPDASVLCGTGLREVVQAKDIPPVLHVGACTDSTRASQIMAYTANAAAQ
PNPAMPFAMVAADPAAEKTMGARYAFVLNGIETYSCVQDNTLASDRFIDYVSNRLRTIVGAAMNWNPDPYRTSEDILCML
DEKRAALGWPVRDYTIGTKEEIEDKIPDTVEIGRSICTII

Sequences:

>Translated_680_residues
MSLKERIKLVHRLNYSKEEVIKHTANKAVAEMVEHMDKEAISNTFDRFAQQHPQCGYGLTGACCAFCSYGPCRVTEKTLY
SVCGKDVDLIVAGNALRRLASGMAAHGAHAREVFIALKAAAEGSAPIPIKCPEKGVAVARALGIETEGKTIEAICGEIAD
IFIDDLQRSLPKRHETLHALAPKERAELWERLGIIPISAYHECFEVNNLTSHGTDSDFESHMQAFLRTVLAYAITTVTST
SLATDIVYGLPRRSKLNVNLGSIVPDGCVNIGINGHAPMVAFAICDIVGTPKIMEKVKRAGADTIRLYGMCCTGGEFIER
DLNIPLVAMASSAEMAVATGAFDAIVVDQQDVLPGMMHVARQFHTRVITTSPSGRKEGAIVLELDYYLKNLDKIYELAEE
ILDIAIDNYRNRESKKVHVPNIRAKVELGFSVEEVMKLFNGSMPDKKIHGLAALLKAGKIRGIVNFGSCGNVRGAVFERN
QIIIAKQLIKNDVLVTAHGCSGMGLLFAGLAHPDASVLCGTGLREVVQAKDIPPVLHVGACTDSTRASQIMAYTANAAAQ
PNPAMPFAMVAADPAAEKTMGARYAFVLNGIETYSCVQDNTLASDRFIDYVSNRLRTIVGAAMNWNPDPYRTSEDILCML
DEKRAALGWPVRDYTIGTKEEIEDKIPDTVEIGRSICTII
>Mature_679_residues
SLKERIKLVHRLNYSKEEVIKHTANKAVAEMVEHMDKEAISNTFDRFAQQHPQCGYGLTGACCAFCSYGPCRVTEKTLYS
VCGKDVDLIVAGNALRRLASGMAAHGAHAREVFIALKAAAEGSAPIPIKCPEKGVAVARALGIETEGKTIEAICGEIADI
FIDDLQRSLPKRHETLHALAPKERAELWERLGIIPISAYHECFEVNNLTSHGTDSDFESHMQAFLRTVLAYAITTVTSTS
LATDIVYGLPRRSKLNVNLGSIVPDGCVNIGINGHAPMVAFAICDIVGTPKIMEKVKRAGADTIRLYGMCCTGGEFIERD
LNIPLVAMASSAEMAVATGAFDAIVVDQQDVLPGMMHVARQFHTRVITTSPSGRKEGAIVLELDYYLKNLDKIYELAEEI
LDIAIDNYRNRESKKVHVPNIRAKVELGFSVEEVMKLFNGSMPDKKIHGLAALLKAGKIRGIVNFGSCGNVRGAVFERNQ
IIIAKQLIKNDVLVTAHGCSGMGLLFAGLAHPDASVLCGTGLREVVQAKDIPPVLHVGACTDSTRASQIMAYTANAAAQP
NPAMPFAMVAADPAAEKTMGARYAFVLNGIETYSCVQDNTLASDRFIDYVSNRLRTIVGAAMNWNPDPYRTSEDILCMLD
EKRAALGWPVRDYTIGTKEEIEDKIPDTVEIGRSICTII

Specific function: Unknown

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 73939; Mature: 73808

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKERIKLVHRLNYSKEEVIKHTANKAVAEMVEHMDKEAISNTFDRFAQQHPQCGYGLT
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GACCAFCSYGPCRVTEKTLYSVCGKDVDLIVAGNALRRLASGMAAHGAHAREVFIALKAA
HHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHEEEHH
AEGSAPIPIKCPEKGVAVARALGIETEGKTIEAICGEIADIFIDDLQRSLPKRHETLHAL
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APKERAELWERLGIIPISAYHECFEVNNLTSHGTDSDFESHMQAFLRTVLAYAITTVTST
CCHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLATDIVYGLPRRSKLNVNLGSIVPDGCVNIGINGHAPMVAFAICDIVGTPKIMEKVKRA
HHHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHC
GADTIRLYGMCCTGGEFIERDLNIPLVAMASSAEMAVATGAFDAIVVDQQDVLPGMMHVA
CCCEEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEECCHHHHHHHHHHH
RQFHTRVITTSPSGRKEGAIVLELDYYLKNLDKIYELAEEILDIAIDNYRNRESKKVHVP
HHHHCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
NIRAKVELGFSVEEVMKLFNGSMPDKKIHGLAALLKAGKIRGIVNFGSCGNVRGAVFERN
CCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEECC
QIIIAKQLIKNDVLVTAHGCSGMGLLFAGLAHPDASVLCGTGLREVVQAKDIPPVLHVGA
CEEEHHHHHHCCCEEEECCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHCCCCCEEEEEC
CTDSTRASQIMAYTANAAAQPNPAMPFAMVAADPAAEKTMGARYAFVLNGIETYSCVQDN
CCCCCHHHHEEEEECCCCCCCCCCCCEEEEECCCHHHHHHCCEEEEEECCCHHHHHCCCC
TLASDRFIDYVSNRLRTIVGAAMNWNPDPYRTSEDILCMLDEKRAALGWPVRDYTIGTKE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCHH
EIEDKIPDTVEIGRSICTII
HHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SLKERIKLVHRLNYSKEEVIKHTANKAVAEMVEHMDKEAISNTFDRFAQQHPQCGYGLT
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
GACCAFCSYGPCRVTEKTLYSVCGKDVDLIVAGNALRRLASGMAAHGAHAREVFIALKAA
HHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHEEEHH
AEGSAPIPIKCPEKGVAVARALGIETEGKTIEAICGEIADIFIDDLQRSLPKRHETLHAL
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APKERAELWERLGIIPISAYHECFEVNNLTSHGTDSDFESHMQAFLRTVLAYAITTVTST
CCHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLATDIVYGLPRRSKLNVNLGSIVPDGCVNIGINGHAPMVAFAICDIVGTPKIMEKVKRA
HHHHHHHHCCCCCCEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHC
GADTIRLYGMCCTGGEFIERDLNIPLVAMASSAEMAVATGAFDAIVVDQQDVLPGMMHVA
CCCEEEEEEEEECCHHHHHHCCCCCEEEECCCCCEEEECCCCEEEEECCHHHHHHHHHHH
RQFHTRVITTSPSGRKEGAIVLELDYYLKNLDKIYELAEEILDIAIDNYRNRESKKVHVP
HHHHCEEEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
NIRAKVELGFSVEEVMKLFNGSMPDKKIHGLAALLKAGKIRGIVNFGSCGNVRGAVFERN
CCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEECC
QIIIAKQLIKNDVLVTAHGCSGMGLLFAGLAHPDASVLCGTGLREVVQAKDIPPVLHVGA
CEEEHHHHHHCCCEEEECCCCCHHHHHHHCCCCCCCEECCCCHHHHHHHCCCCCEEEEEC
CTDSTRASQIMAYTANAAAQPNPAMPFAMVAADPAAEKTMGARYAFVLNGIETYSCVQDN
CCCCCHHHHEEEEECCCCCCCCCCCCEEEEECCCHHHHHHCCEEEEEECCCHHHHHCCCC
TLASDRFIDYVSNRLRTIVGAAMNWNPDPYRTSEDILCMLDEKRAALGWPVRDYTIGTKE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHCCCCCCCCCCCCHH
EIEDKIPDTVEIGRSICTII
HHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]