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The map label for this gene is nrtC [H]

Identifier: 119355994

GI number: 119355994

Start: 164039

End: 165280

Strand: Direct

Name: nrtC [H]

Synonym: Cpha266_0144

Alternate gene names: 119355994

Gene position: 164039-165280 (Clockwise)

Preceding gene: 119355993

Following gene: 119355995

Centisome position: 5.23

GC content: 52.82

Gene sequence:

>1242_bases
ATGAGCAATGAGCAAAAACCAACTTCCCGCAGAGAATTTCTAAGGAGTTCGGCTTTCGGACTAAGCGCAGTTCTGGGCGG
ATTGCCACTCATACAGGGGTGCTCCAAAGAGTCGGGGCAGGAGAAAGGCGCTCCGAATATCGGCACATCGGGAAAAAAGC
TCAAAAGCAGTTATTTGCCGATAACCGATGCAACGCCGATCATTCTCGCCCATGAACTGGGTTTTTACAAAGAGCTTGGC
ATCGATTCCGAAAAACCTGTACTGATAAGGGGTTGGGCGCCAATGGCCGAAGCCTTTATGGCAGGACGTTTCAATCTTAC
CCATCTTCTTGCGCCGATCCCTATTTACATGCGCTACAGCAAAGGCTTTCCCGTGAAAGTGGTTGCCTGGGACCACATCA
ACGGTTCAGCGCTGACGGTCGGGAAGGAGAGCGGGATCAAATCTTGCGCCGATCTGGGCGGCAAGCAGATTGCCATTCCC
TACTGGTATTCCATGCATAATATCATTCTTCAGATGATTGCCCGAGAGCACGGTATCGAGCCGGTTATTCAGAGCAAGAC
GGCGCCTCTCACCAGCAAACAGATGAATCTGTTTGTCATGGCTCCCCCCGACATGCCTACAGCCATAGCCTCAAAGGCCA
TTGACGGCTACATTGTTGCCGAACCGTTCAACGCTGCCGGTGAAGTTCTCGCGGGCGGAAGGATTGTCCGTTTTACCGGC
GACGTCTGGAAAAACCATCCATGCTGTGTTGCCGTCATGAACGAAAAGGAGCTTGAAGACAAAGAGTGGTCACACAAGGT
GATTCAGGCTCTGGTCAAGGCGGAACTCTGGGCGCTCAACAATGTGGAAGAGGCCGCGCATATTCTCTCGAAGGATGGCG
CTCAATACCTTCCGCTTCCGGAAAAAATTGTCAAGCGGGCAATGATGAAATACGATCTGGAGACATACGGAGCAGGAAGC
GGAACCGGTGCCATTCAGAACCCCGACTGGCATGCAAGCAGGATTTCCTACGAACCTTATCAATTTGAATCGGCAACCCG
TCATATCGTGGAGATGCTGAAGCAGACCAGGGTGGACGGGGATGCCGCTTTTCTTAAGGCGCTTGATCCCGGTAAAGTAC
ATAAGGAATTGATGTACACGGCAGGAGTCGAGGCGGCAGCCGCAGCGCTTGGCGGACTCGGTCAGTTTGCCGGAGTCAAT
TCGGCCTCGCCGCTGGTCAGGGAAGAGGTTATCAAGGTGTAA

Upstream 100 bases:

>100_bases
ATTCATCCGGGAGTTTTCTTTTCCCGCCGGGCTCCCGTTCCCGGATCTCTCAGTATTGCGTTTCAGTCATATTTTTCTCA
ACAGCAACAATGGAGGAGTC

Downstream 100 bases:

>100_bases
GGACAACCCCGTTTTCGCCCGCCCCGAAATCATCAATGTTTTCGGGGCGGGCAGAACATGATTCGCAATATGGGAGCGCG
GAGAGAACAGAGGCTGACGG

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MSNEQKPTSRREFLRSSAFGLSAVLGGLPLIQGCSKESGQEKGAPNIGTSGKKLKSSYLPITDATPIILAHELGFYKELG
IDSEKPVLIRGWAPMAEAFMAGRFNLTHLLAPIPIYMRYSKGFPVKVVAWDHINGSALTVGKESGIKSCADLGGKQIAIP
YWYSMHNIILQMIAREHGIEPVIQSKTAPLTSKQMNLFVMAPPDMPTAIASKAIDGYIVAEPFNAAGEVLAGGRIVRFTG
DVWKNHPCCVAVMNEKELEDKEWSHKVIQALVKAELWALNNVEEAAHILSKDGAQYLPLPEKIVKRAMMKYDLETYGAGS
GTGAIQNPDWHASRISYEPYQFESATRHIVEMLKQTRVDGDAAFLKALDPGKVHKELMYTAGVEAAAAALGGLGQFAGVN
SASPLVREEVIKV

Sequences:

>Translated_413_residues
MSNEQKPTSRREFLRSSAFGLSAVLGGLPLIQGCSKESGQEKGAPNIGTSGKKLKSSYLPITDATPIILAHELGFYKELG
IDSEKPVLIRGWAPMAEAFMAGRFNLTHLLAPIPIYMRYSKGFPVKVVAWDHINGSALTVGKESGIKSCADLGGKQIAIP
YWYSMHNIILQMIAREHGIEPVIQSKTAPLTSKQMNLFVMAPPDMPTAIASKAIDGYIVAEPFNAAGEVLAGGRIVRFTG
DVWKNHPCCVAVMNEKELEDKEWSHKVIQALVKAELWALNNVEEAAHILSKDGAQYLPLPEKIVKRAMMKYDLETYGAGS
GTGAIQNPDWHASRISYEPYQFESATRHIVEMLKQTRVDGDAAFLKALDPGKVHKELMYTAGVEAAAAALGGLGQFAGVN
SASPLVREEVIKV
>Mature_412_residues
SNEQKPTSRREFLRSSAFGLSAVLGGLPLIQGCSKESGQEKGAPNIGTSGKKLKSSYLPITDATPIILAHELGFYKELGI
DSEKPVLIRGWAPMAEAFMAGRFNLTHLLAPIPIYMRYSKGFPVKVVAWDHINGSALTVGKESGIKSCADLGGKQIAIPY
WYSMHNIILQMIAREHGIEPVIQSKTAPLTSKQMNLFVMAPPDMPTAIASKAIDGYIVAEPFNAAGEVLAGGRIVRFTGD
VWKNHPCCVAVMNEKELEDKEWSHKVIQALVKAELWALNNVEEAAHILSKDGAQYLPLPEKIVKRAMMKYDLETYGAGSG
TGAIQNPDWHASRISYEPYQFESATRHIVEMLKQTRVDGDAAFLKALDPGKVHKELMYTAGVEAAAAALGGLGQFAGVNS
ASPLVREEVIKV

Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate. Probably responsible for energy coupling to the transport system [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR015168
- InterPro:   IPR005890 [H]

Pfam domain/function: PF00005 ABC_tran; PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 44916; Mature: 44785

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEQKPTSRREFLRSSAFGLSAVLGGLPLIQGCSKESGQEKGAPNIGTSGKKLKSSYLP
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCC
ITDATPIILAHELGFYKELGIDSEKPVLIRGWAPMAEAFMAGRFNLTHLLAPIPIYMRYS
CCCCCCEEEEHHHCHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHCCCEEEEEEC
KGFPVKVVAWDHINGSALTVGKESGIKSCADLGGKQIAIPYWYSMHNIILQMIAREHGIE
CCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCC
PVIQSKTAPLTSKQMNLFVMAPPDMPTAIASKAIDGYIVAEPFNAAGEVLAGGRIVRFTG
HHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCEEEECCCCCCCHHHCCCEEEEEEC
DVWKNHPCCVAVMNEKELEDKEWSHKVIQALVKAELWALNNVEEAAHILSKDGAQYLPLP
HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCH
EKIVKRAMMKYDLETYGAGSGTGAIQNPDWHASRISYEPYQFESATRHIVEMLKQTRVDG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
DAAFLKALDPGKVHKELMYTAGVEAAAAALGGLGQFAGVNSASPLVREEVIKV
CHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SNEQKPTSRREFLRSSAFGLSAVLGGLPLIQGCSKESGQEKGAPNIGTSGKKLKSSYLP
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCC
ITDATPIILAHELGFYKELGIDSEKPVLIRGWAPMAEAFMAGRFNLTHLLAPIPIYMRYS
CCCCCCEEEEHHHCHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHCCCEEEEEEC
KGFPVKVVAWDHINGSALTVGKESGIKSCADLGGKQIAIPYWYSMHNIILQMIAREHGIE
CCCCEEEEEEECCCCCEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCC
PVIQSKTAPLTSKQMNLFVMAPPDMPTAIASKAIDGYIVAEPFNAAGEVLAGGRIVRFTG
HHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCEEEECCCCCCCHHHCCCEEEEEEC
DVWKNHPCCVAVMNEKELEDKEWSHKVIQALVKAELWALNNVEEAAHILSKDGAQYLPLP
HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCH
EKIVKRAMMKYDLETYGAGSGTGAIQNPDWHASRISYEPYQFESATRHIVEMLKQTRVDG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
DAAFLKALDPGKVHKELMYTAGVEAAAAALGGLGQFAGVNSASPLVREEVIKV
CHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]