| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355990
Identifier: 119355990
GI number: 119355990
Start: 159518
End: 160669
Strand: Direct
Name: 119355990
Synonym: Cpha266_0140
Alternate gene names: NA
Gene position: 159518-160669 (Clockwise)
Preceding gene: 119355989
Following gene: 119355991
Centisome position: 5.09
GC content: 51.22
Gene sequence:
>1152_bases ATGATAGAGAAAGCGCTGAAAGGAAACCGAAACTACTGGCTCTGGATAGCATTCCTTTGTCTGGTTATTGGTTCCGGACT TTTTGCCTACAGCCAGCAGAGATGGTTTGGCCTTACGGTTACCGGAATGGGTCGGGATGTGAGCTGGGGTCTCTATATCG CTCAATTCACCTTTCTTGTCGGGGTTGCTGCCTCCGCCGTCATGGTGGTACTTCCCTACTATTTGCACAACCAGAAGGCG TTTGCCAAAACCGTTATCATCGGCGAGTTCATGGCTGTTTCAGCCACGATGATGTGTCTGCTTTTTATCCTTGCCGATAT GGGCAGGCCTGATCGGGTGCTCAACGTTCTGCTCTATCCGAGTCCTCATGCAATGGTTTTCTGGGATGTTCTCGTTTTGA ACGGATATCTGGTCATCAATTTCGTGAGTGCCTGGACGGTTCTCGGCGCAGAGCGGAAAGGGGTGCCTCCGCCGGCCTGG ATCAAGCCGGTCATCTACCTCTCCATACCATGGGCGGTGAGCATTCATACGGTCACGGCTTTTCTCTATGCAGGTCTTCC CGGTCGCCATCTCTGGCTGACTGCTGTGCTTGCTCCCCGCTTTCTCGCCTCGGCATTCGCTGCAGGAACGGCGCTGTTGA TACTTGTTACCCTTATTCTTAAAAAAACAACGGGGTTTGATGCCGGCAAAGAGGCCAGAGAGAAGCTTGCCGTTCTGGTT ATCTATGCGGGTCTGGTTAATTTCTTTCTGATCGGCACGGAGTTTTTTACGGCTTTTTACAGCAACGTGCCCGCTCATAT GCAGAGCCTTCAGTATCTGTTTTTTGGACTTGAAGGCAAGAGTCAGTTGGTGCCATGGATGTGGGTATCCCTTCTTGCCG GGATCGGAGCGCTTGCGATGCTTTTTTCACAGAAACGAAAAAGCTCCAATCTCTGGCTTGCCGCAGCAAGCGGCGCAATG GTTCTTTCGATCTGGATTGATAAAGGGGTTGGATTGATTATCGGAGGATTTGTTCCTTCGCCGTTGGAAGAGATCGTCGA GTACTCACCTACCGTAACGGAAATTGTCATTACACTGGGCATCTGGGCAATCGGTACGCTCCTGCTCACCGTTCTGCTCA AAGTAGCGGTTGCCGTCAAAACGATGGATTAA
Upstream 100 bases:
>100_bases GTCTGACATCCGGAAGCTTCTTGAAAACAACCAGACGATGCAGCGGAAACCCGAACTGGGTACCTTGCCGTCAGTTTTTT ACATTATCTAACGACTTCCC
Downstream 100 bases:
>100_bases TCGCTCCTTTTCGTCGGAACCAGCCCGATGGCGTTTTCGGAAACGAAGAAGGCTTACCTTTTTTATAAGCTCGCAATAGT GATGCGGGCTTTTAATTTTT
Product: polysulfide reductase, NrfD
Products: NA
Alternate protein names: Polysulphide Reductase; Polysulfide Reductase Subunit C; Molybdopterin Oxidoreductase Membrane Subunit; Reductase Transmembrane Subunit; Molybdopterin Oxidoreductase; Hme Subunit B; Polysulphide Reductase Nrfd; Dimethylsulfoxide Reductase Subunit C; Oxidoreductase Membrane Subunit
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MIEKALKGNRNYWLWIAFLCLVIGSGLFAYSQQRWFGLTVTGMGRDVSWGLYIAQFTFLVGVAASAVMVVLPYYLHNQKA FAKTVIIGEFMAVSATMMCLLFILADMGRPDRVLNVLLYPSPHAMVFWDVLVLNGYLVINFVSAWTVLGAERKGVPPPAW IKPVIYLSIPWAVSIHTVTAFLYAGLPGRHLWLTAVLAPRFLASAFAAGTALLILVTLILKKTTGFDAGKEAREKLAVLV IYAGLVNFFLIGTEFFTAFYSNVPAHMQSLQYLFFGLEGKSQLVPWMWVSLLAGIGALAMLFSQKRKSSNLWLAAASGAM VLSIWIDKGVGLIIGGFVPSPLEEIVEYSPTVTEIVITLGIWAIGTLLLTVLLKVAVAVKTMD
Sequences:
>Translated_383_residues MIEKALKGNRNYWLWIAFLCLVIGSGLFAYSQQRWFGLTVTGMGRDVSWGLYIAQFTFLVGVAASAVMVVLPYYLHNQKA FAKTVIIGEFMAVSATMMCLLFILADMGRPDRVLNVLLYPSPHAMVFWDVLVLNGYLVINFVSAWTVLGAERKGVPPPAW IKPVIYLSIPWAVSIHTVTAFLYAGLPGRHLWLTAVLAPRFLASAFAAGTALLILVTLILKKTTGFDAGKEAREKLAVLV IYAGLVNFFLIGTEFFTAFYSNVPAHMQSLQYLFFGLEGKSQLVPWMWVSLLAGIGALAMLFSQKRKSSNLWLAAASGAM VLSIWIDKGVGLIIGGFVPSPLEEIVEYSPTVTEIVITLGIWAIGTLLLTVLLKVAVAVKTMD >Mature_383_residues MIEKALKGNRNYWLWIAFLCLVIGSGLFAYSQQRWFGLTVTGMGRDVSWGLYIAQFTFLVGVAASAVMVVLPYYLHNQKA FAKTVIIGEFMAVSATMMCLLFILADMGRPDRVLNVLLYPSPHAMVFWDVLVLNGYLVINFVSAWTVLGAERKGVPPPAW IKPVIYLSIPWAVSIHTVTAFLYAGLPGRHLWLTAVLAPRFLASAFAAGTALLILVTLILKKTTGFDAGKEAREKLAVLV IYAGLVNFFLIGTEFFTAFYSNVPAHMQSLQYLFFGLEGKSQLVPWMWVSLLAGIGALAMLFSQKRKSSNLWLAAASGAM VLSIWIDKGVGLIIGGFVPSPLEEIVEYSPTVTEIVITLGIWAIGTLLLTVLLKVAVAVKTMD
Specific function: Unknown
COG id: COG5557
COG function: function code C; Polysulphide reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42011; Mature: 42011
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKALKGNRNYWLWIAFLCLVIGSGLFAYSQQRWFGLTVTGMGRDVSWGLYIAQFTFLV CCCCHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH GVAASAVMVVLPYYLHNQKAFAKTVIIGEFMAVSATMMCLLFILADMGRPDRVLNVLLYP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECC SPHAMVFWDVLVLNGYLVINFVSAWTVLGAERKGVPPPAWIKPVIYLSIPWAVSIHTVTA CCCHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHCCEEEEEECCHHHHHHHHH FLYAGLPGRHLWLTAVLAPRFLASAFAAGTALLILVTLILKKTTGFDAGKEAREKLAVLV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IYAGLVNFFLIGTEFFTAFYSNVPAHMQSLQYLFFGLEGKSQLVPWMWVSLLAGIGALAM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH LFSQKRKSSNLWLAAASGAMVLSIWIDKGVGLIIGGFVPSPLEEIVEYSPTVTEIVITLG HHHHHCCCCCEEEEECCCCEEEEEEECCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHH IWAIGTLLLTVLLKVAVAVKTMD HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEKALKGNRNYWLWIAFLCLVIGSGLFAYSQQRWFGLTVTGMGRDVSWGLYIAQFTFLV CCCCHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH GVAASAVMVVLPYYLHNQKAFAKTVIIGEFMAVSATMMCLLFILADMGRPDRVLNVLLYP HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEECC SPHAMVFWDVLVLNGYLVINFVSAWTVLGAERKGVPPPAWIKPVIYLSIPWAVSIHTVTA CCCHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCHHHCCEEEEEECCHHHHHHHHH FLYAGLPGRHLWLTAVLAPRFLASAFAAGTALLILVTLILKKTTGFDAGKEAREKLAVLV HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IYAGLVNFFLIGTEFFTAFYSNVPAHMQSLQYLFFGLEGKSQLVPWMWVSLLAGIGALAM HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH LFSQKRKSSNLWLAAASGAMVLSIWIDKGVGLIIGGFVPSPLEEIVEYSPTVTEIVITLG HHHHHCCCCCEEEEECCCCEEEEEEECCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHH IWAIGTLLLTVLLKVAVAVKTMD HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA