| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
Click here to switch to the map view.
The map label for this gene is dsrE [H]
Identifier: 119355982
GI number: 119355982
Start: 154089
End: 154448
Strand: Direct
Name: dsrE [H]
Synonym: Cpha266_0132
Alternate gene names: 119355982
Gene position: 154089-154448 (Clockwise)
Preceding gene: 119355981
Following gene: 119355983
Centisome position: 4.92
GC content: 49.17
Gene sequence:
>360_bases GTGAAAATAGGAATCCTTCTCAAGGAGGGGCCGTACAACCATCAGGCATCCGATACGGCTTACAAGTTTGCTGAAGCTGC CATCAAAAAGGGACATACCATCGATGCGGTGTTTCTTTATAATGACGGAGTCGGCAATGTTACAAAAATGATGGATCCTC CCCAGGACGACAGAAATATTGCCGCCCGCTGGGATGCGTTGAGCAAGCAGCATGGGGTTGAAATTCTGGCCTGCATTGCA GCCTCAAAACGACGAGGTATCAACGACGACGTGATTATCGAGGGCGGTACCATTACCGGCCTTGGTACTCTTACGGATAT TGCCATTCGCAACGACAGACTGATAACTTTTGGAGACTGA
Upstream 100 bases:
>100_bases ATGGCATCCTTTATATGAGGCTTTTACTGCCGAAATATCGAGTTGTTGAGAGGTGCGCCGCCGTTGAATTTTTCATAACA TTCTAACGTACTGACCAAAG
Downstream 100 bases:
>100_bases ACTATGGGAAACATGGATATCGAAGAGAACACGGATATCAAAAAAATCATGCATGTGATGCGCCATGCGCCTCATGGCAC CATTTACAGTTATGAGGGGC
Product: DsrE family protein
Products: NA
Alternate protein names: Intracellular sulfur oxidation protein dsrE [H]
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKIGILLKEGPYNHQASDTAYKFAEAAIKKGHTIDAVFLYNDGVGNVTKMMDPPQDDRNIAARWDALSKQHGVEILACIA ASKRRGINDDVIIEGGTITGLGTLTDIAIRNDRLITFGD
Sequences:
>Translated_119_residues MKIGILLKEGPYNHQASDTAYKFAEAAIKKGHTIDAVFLYNDGVGNVTKMMDPPQDDRNIAARWDALSKQHGVEILACIA ASKRRGINDDVIIEGGTITGLGTLTDIAIRNDRLITFGD >Mature_119_residues MKIGILLKEGPYNHQASDTAYKFAEAAIKKGHTIDAVFLYNDGVGNVTKMMDPPQDDRNIAARWDALSKQHGVEILACIA ASKRRGINDDVIIEGGTITGLGTLTDIAIRNDRLITFGD
Specific function: Not known. Could be involved in the oxidation of intracellular sulfur [H]
COG id: COG1553
COG function: function code P; Uncharacterized conserved protein involved in intracellular sulfur reduction
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dsrE/tusD family [H]
Homologues:
Organism=Escherichia coli, GI1789743, Length=128, Percent_Identity=32.03125, Blast_Score=92, Evalue=8e-21,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003787 - InterPro: IPR017463 [H]
Pfam domain/function: PF02635 DrsE [H]
EC number: NA
Molecular weight: Translated: 12928; Mature: 12928
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGILLKEGPYNHQASDTAYKFAEAAIKKGHTIDAVFLYNDGVGNVTKMMDPPQDDRNI CEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHCCCCCCCCCCE AARWDALSKQHGVEILACIAASKRRGINDDVIIEGGTITGLGTLTDIAIRNDRLITFGD EHHHHHHCHHCCCEEEEEEHHHHCCCCCCCEEEECCCEECCCCEEEEEECCCEEEEECC >Mature Secondary Structure MKIGILLKEGPYNHQASDTAYKFAEAAIKKGHTIDAVFLYNDGVGNVTKMMDPPQDDRNI CEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHCCCCCCCCCCE AARWDALSKQHGVEILACIAASKRRGINDDVIIEGGTITGLGTLTDIAIRNDRLITFGD EHHHHHHCHHCCCEEEEEEHHHHCCCCCCCEEEECCCEECCCCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9695921 [H]