| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355981
Identifier: 119355981
GI number: 119355981
Start: 153669
End: 154037
Strand: Direct
Name: 119355981
Synonym: Cpha266_0131
Alternate gene names: NA
Gene position: 153669-154037 (Clockwise)
Preceding gene: 119355980
Following gene: 119355982
Centisome position: 4.9
GC content: 49.32
Gene sequence:
>369_bases ATGTCCGAAGATTTAATACGCCGGGTTGAAGAGGCGATAGCATGCTCAAGAAATTGGGCAGAAAAAGGGTGGCCTGTTAC GTTCGGTTCCCGAAATGTAGCCGTTTCATCGTTAAAAGAGGCAAAAGCGCTTCCGTCCAGCTTTCTTTATCGCCAGGAGG CCCTGAATTACTGGAATCAGGCTCGGCTCATGGGTAATGACGCTGGTGATGCGGGAGCGAAGGCGCTCGATGCCCTGAAA AGCGGCAATATGCGTGCAGCTCATGATGCGCTCTATTTATCGCAGTATATCGAAAAGCCTCTTGCGGAAAATGCCCGAAC ATGGCATCCTTTATATGAGGCTTTTACTGCCGAAATATCGAGTTGTTGA
Upstream 100 bases:
>100_bases TGCTCTCTGGTCTGCCCTTCCGGCTATATACAGATGGGAATGGGAGAGGGTCTTTAACGGTTTGAATGGCAACGTTGAAA AACAGGGAAGGAGAAGATCA
Downstream 100 bases:
>100_bases GAGGTGCGCCGCCGTTGAATTTTTCATAACATTCTAACGTACTGACCAAAGGTGAAAATAGGAATCCTTCTCAAGGAGGG GCCGTACAACCATCAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSEDLIRRVEEAIACSRNWAEKGWPVTFGSRNVAVSSLKEAKALPSSFLYRQEALNYWNQARLMGNDAGDAGAKALDALK SGNMRAAHDALYLSQYIEKPLAENARTWHPLYEAFTAEISSC
Sequences:
>Translated_122_residues MSEDLIRRVEEAIACSRNWAEKGWPVTFGSRNVAVSSLKEAKALPSSFLYRQEALNYWNQARLMGNDAGDAGAKALDALK SGNMRAAHDALYLSQYIEKPLAENARTWHPLYEAFTAEISSC >Mature_121_residues SEDLIRRVEEAIACSRNWAEKGWPVTFGSRNVAVSSLKEAKALPSSFLYRQEALNYWNQARLMGNDAGDAGAKALDALKS GNMRAAHDALYLSQYIEKPLAENARTWHPLYEAFTAEISSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13583; Mature: 13452
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDLIRRVEEAIACSRNWAEKGWPVTFGSRNVAVSSLKEAKALPSSFLYRQEALNYWNQ CCHHHHHHHHHHHHHHCCHHCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH ARLMGNDAGDAGAKALDALKSGNMRAAHDALYLSQYIEKPLAENARTWHPLYEAFTAEIS HHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SC CC >Mature Secondary Structure SEDLIRRVEEAIACSRNWAEKGWPVTFGSRNVAVSSLKEAKALPSSFLYRQEALNYWNQ CHHHHHHHHHHHHHHCCHHCCCCCEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH ARLMGNDAGDAGAKALDALKSGNMRAAHDALYLSQYIEKPLAENARTWHPLYEAFTAEIS HHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH SC CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA