| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355972
Identifier: 119355972
GI number: 119355972
Start: 144619
End: 145047
Strand: Direct
Name: 119355972
Synonym: Cpha266_0122
Alternate gene names: NA
Gene position: 144619-145047 (Clockwise)
Preceding gene: 119355971
Following gene: 119355973
Centisome position: 4.61
GC content: 46.39
Gene sequence:
>429_bases ATGAAAGACACGAACAGGGAAAAACCTGACGAAGGAGATGTTCAGTTTGTCTATGCAAAGGTGCTTGATTTTGTTTCACA CGCAGGCATGGTCTTTATTGCAGCGGGGTATTTGATCTATGTGATGCAACTGCTTCCTCTTTCCGTATCGATTCGGGCTG TAGCGGATAACTGGCATCTCAGCGCTTCAGATATGCAGCAAAAGCTTCATGTTCCAAGCGGCTGGTCATTTATGGGAAGT ATGGCGGATGCGTTGCATGGGGATGTCGTGAGCTATATGTCTATTCTTTTTCTCTGCATGGCGACGATTCTCTGTCTTGT GTTTGCGGTAAAAGTCTTTTTCCGTGAAAAAAACTACATCTATACAGCGATTACTTTTCTGCAGGCGCTGGTGCTTCTCG TTGCGGCAAGCGGCGTGATTTCTCGCTGA
Upstream 100 bases:
>100_bases CCGGACTGCTGACGAAAGTCAATACCCGCTCGGTACGGTTGATTGTCATTTCAATGCTTTTGCTTGCAGGTTTACGCTCA CTGTTAAAGGGGTTTGGAAT
Downstream 100 bases:
>100_bases GCGGGCTGAGGGAGGTGCGATCTTCGTAAGGATTGTTTCAGGAGCCGGTTGCAAAAATTCCGGTTATAAAAAATGTTTCC GGCCAAAGAAAAAATACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHLSASDMQQKLHVPSGWSFMGS MADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYIYTAITFLQALVLLVAASGVISR
Sequences:
>Translated_142_residues MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHLSASDMQQKLHVPSGWSFMGS MADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYIYTAITFLQALVLLVAASGVISR >Mature_142_residues MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHLSASDMQQKLHVPSGWSFMGS MADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYIYTAITFLQALVLLVAASGVISR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020327 - ProDom: PD085044 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15791; Mature: 15791
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC SASDMQQKLHVPSGWSFMGSMADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYI CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YTAITFLQALVLLVAASGVISR HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC SASDMQQKLHVPSGWSFMGSMADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYI CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH YTAITFLQALVLLVAASGVISR HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]