Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119355972

Identifier: 119355972

GI number: 119355972

Start: 144619

End: 145047

Strand: Direct

Name: 119355972

Synonym: Cpha266_0122

Alternate gene names: NA

Gene position: 144619-145047 (Clockwise)

Preceding gene: 119355971

Following gene: 119355973

Centisome position: 4.61

GC content: 46.39

Gene sequence:

>429_bases
ATGAAAGACACGAACAGGGAAAAACCTGACGAAGGAGATGTTCAGTTTGTCTATGCAAAGGTGCTTGATTTTGTTTCACA
CGCAGGCATGGTCTTTATTGCAGCGGGGTATTTGATCTATGTGATGCAACTGCTTCCTCTTTCCGTATCGATTCGGGCTG
TAGCGGATAACTGGCATCTCAGCGCTTCAGATATGCAGCAAAAGCTTCATGTTCCAAGCGGCTGGTCATTTATGGGAAGT
ATGGCGGATGCGTTGCATGGGGATGTCGTGAGCTATATGTCTATTCTTTTTCTCTGCATGGCGACGATTCTCTGTCTTGT
GTTTGCGGTAAAAGTCTTTTTCCGTGAAAAAAACTACATCTATACAGCGATTACTTTTCTGCAGGCGCTGGTGCTTCTCG
TTGCGGCAAGCGGCGTGATTTCTCGCTGA

Upstream 100 bases:

>100_bases
CCGGACTGCTGACGAAAGTCAATACCCGCTCGGTACGGTTGATTGTCATTTCAATGCTTTTGCTTGCAGGTTTACGCTCA
CTGTTAAAGGGGTTTGGAAT

Downstream 100 bases:

>100_bases
GCGGGCTGAGGGAGGTGCGATCTTCGTAAGGATTGTTTCAGGAGCCGGTTGCAAAAATTCCGGTTATAAAAAATGTTTCC
GGCCAAAGAAAAAATACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHLSASDMQQKLHVPSGWSFMGS
MADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYIYTAITFLQALVLLVAASGVISR

Sequences:

>Translated_142_residues
MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHLSASDMQQKLHVPSGWSFMGS
MADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYIYTAITFLQALVLLVAASGVISR
>Mature_142_residues
MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHLSASDMQQKLHVPSGWSFMGS
MADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYIYTAITFLQALVLLVAASGVISR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020327
- ProDom:   PD085044 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15791; Mature: 15791

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
SASDMQQKLHVPSGWSFMGSMADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYI
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YTAITFLQALVLLVAASGVISR
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKDTNREKPDEGDVQFVYAKVLDFVSHAGMVFIAAGYLIYVMQLLPLSVSIRAVADNWHL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
SASDMQQKLHVPSGWSFMGSMADALHGDVVSYMSILFLCMATILCLVFAVKVFFREKNYI
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
YTAITFLQALVLLVAASGVISR
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]