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The map label for this gene is ycfF [C]

Identifier: 119355955

GI number: 119355955

Start: 120911

End: 121306

Strand: Direct

Name: ycfF [C]

Synonym: Cpha266_0105

Alternate gene names: 119355955

Gene position: 120911-121306 (Clockwise)

Preceding gene: 119355954

Following gene: 119355956

Centisome position: 3.86

GC content: 51.77

Gene sequence:

>396_bases
ATGATTGCTATGCATAACTCATTTTATAATCCTGATTGTCTTTTCTGCAGGATAGCGGCCGGCGAAATTCCCGCCGACAT
CGTCTATCGCGATGAGCATGTTCTTGCGTTCAGGGATATCAATCCGGCAGCTCCCGAACATCTGCTGATCATTCCCTTGA
AGCATATTGCCTCCCTGAACGAGCTTCAGTCTGAAGACAAGGAGATTGCCGGTCATCTGCTTCTTGCTGCGGGAGAGGTT
GCCCGGAGAGCGGGGTTGTATGATTCAGGTTACAGGATGGTGTTTAATACAGGAGCGGATGCGCTGCAAAGCGTGTTTCA
CATTCACGGCCATCTGATCGGCGGCTGTCGTATGGGTTGGCCTCCGTTTCCCGGAGAGGTCGTCGGTCATGGTTAA

Upstream 100 bases:

>100_bases
AGCGGCAAAGCCTCTCTTTCGGTCGTAAGCGAAAAATAGGCAATGGGCGTGTCGATTCTCTTTTTGTAATCCCTGGCGTT
CACAGCGCAACCAAATCCGT

Downstream 100 bases:

>100_bases
AGGGCATCTTGCTTCGCCTGGTTCTACTCGTTCAGGAATCTGATAAAGGAGATCGTGCATGAGATCGCAAAAAGATCCGT
CAGGAGTTACGCGCTCGCTT

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MIAMHNSFYNPDCLFCRIAAGEIPADIVYRDEHVLAFRDINPAAPEHLLIIPLKHIASLNELQSEDKEIAGHLLLAAGEV
ARRAGLYDSGYRMVFNTGADALQSVFHIHGHLIGGCRMGWPPFPGEVVGHG

Sequences:

>Translated_131_residues
MIAMHNSFYNPDCLFCRIAAGEIPADIVYRDEHVLAFRDINPAAPEHLLIIPLKHIASLNELQSEDKEIAGHLLLAAGEV
ARRAGLYDSGYRMVFNTGADALQSVFHIHGHLIGGCRMGWPPFPGEVVGHG
>Mature_131_residues
MIAMHNSFYNPDCLFCRIAAGEIPADIVYRDEHVLAFRDINPAAPEHLLIIPLKHIASLNELQSEDKEIAGHLLLAAGEV
ARRAGLYDSGYRMVFNTGADALQSVFHIHGHLIGGCRMGWPPFPGEVVGHG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=111, Percent_Identity=45.945945945946, Blast_Score=112, Evalue=1e-25,
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=46.3636363636364, Blast_Score=112, Evalue=1e-25,
Organism=Escherichia coli, GI1787346, Length=108, Percent_Identity=42.5925925925926, Blast_Score=92, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17506713, Length=122, Percent_Identity=40.9836065573771, Blast_Score=107, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6320078, Length=117, Percent_Identity=35.042735042735, Blast_Score=63, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574010, Length=113, Percent_Identity=43.3628318584071, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24581222, Length=113, Percent_Identity=43.3628318584071, Blast_Score=103, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14355; Mature: 14355

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAMHNSFYNPDCLFCRIAAGEIPADIVYRDEHVLAFRDINPAAPEHLLIIPLKHIASLN
CEECCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEHHHHHHHH
ELQSEDKEIAGHLLLAAGEVARRAGLYDSGYRMVFNTGADALQSVFHIHGHLIGGCRMGW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHEEECCCCCC
PPFPGEVVGHG
CCCCCCCCCCC
>Mature Secondary Structure
MIAMHNSFYNPDCLFCRIAAGEIPADIVYRDEHVLAFRDINPAAPEHLLIIPLKHIASLN
CEECCCCCCCCCEEEEEEECCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEHHHHHHHH
ELQSEDKEIAGHLLLAAGEVARRAGLYDSGYRMVFNTGADALQSVFHIHGHLIGGCRMGW
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHEEECCCCCC
PPFPGEVVGHG
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]