Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119355936

Identifier: 119355936

GI number: 119355936

Start: 102059

End: 102997

Strand: Reverse

Name: 119355936

Synonym: Cpha266_0086

Alternate gene names: NA

Gene position: 102997-102059 (Counterclockwise)

Preceding gene: 119355938

Following gene: 119355935

Centisome position: 3.29

GC content: 57.29

Gene sequence:

>939_bases
ATGAAAAGGATCACCATCCCCGCACTGCTTGCGATCATGCTCCTCCTGTGTCAATCGCTGAGTTTCGCGGCCGTCAGTCA
GTTTACCGGCACATGGAAAAACACCGATCCGAACACAGCAGGAGTCACAAAGCTGAGCATCACCGGAAACGGCAACTCCC
TGAGAATGCGCGCCTGGGGCAAATGCCACCCGCAGGACTGCGACTGGGGCGAAGTCAACGCCTATGCCTACGCTCCCGGC
GTATCCTCGGATATCGATCAGAACGCCCAGGCAGTATCGGCACTCTTCACCACCGGCTTCAGCCAGACGCTGGTCATCGT
CAGACCGATCAGCAGAAGCTCCATTCGCGCCGACATCTACACCCGGTTTACCGACAACAGCGGACGCTCGAACTATACGG
CATCCTACACCTTCAACCGGCAGCTGATCGTCGGTCCCATCGGCCCGATAGGCCCTATAGGGCCGATACGCCCCATGCCG
TCAGTTGAAGAGGATTGCATTTCGTTCAACCCGAGCACAGTTACCGTTAAAAACCTTGACGGACGCTGGACGATAGTCGA
TGGCAACCACCTCATGTTCAACTTCGGCCCGAACAGAACGGAAGCGCTGCAGGCGTTGAGAATCATCAAACACTACCGGA
TGAACAGTTCCTGCTTCGTCGGTCGCCCCGACCCCAGCTTCCAGTACCTGCTTGTTAACGGCAGGGCGCCGCAGGGCAAC
ATGCCCGGCGAGGACTGCGTATCGTTCAACCCGAACACCATCGAAGTGAGGAACATCGGCGGAAGCTGGAAAATCGTCGA
CGGCAGTCACTGGGTTTTCGATTTCGGCAGCAAGGAAGACGAAGCGAGAAAAGCCTTCGCCATCATCAAGAAGTACGGCT
TCACCCGCAGCTGCTTCGTCGGTCGCCCCGACCCGAGCTTCCAGTACCTGAAGAAGTAA

Upstream 100 bases:

>100_bases
ACATGAGGATTTCGAGCACCGACCAACGCAGCAATTTGGGTGCGCAATAACTTTATAGAGGTATCCTCAACTTGCCCTCC
ACTTTTCAACAGGAAATAAC

Downstream 100 bases:

>100_bases
TCGCTTCGGCAGCATGAACAGTAAAAACCCCTCGGTTTCGAGCATGAAGCCGGGGGTTTTTATTAGTTATACTCAAAATC
AACCTTTCGTTATTGTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWGKCHPQDCDWGEVNAYAYAPG
VSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIYTRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMP
SVEEDCISFNPSTVTVKNLDGRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN
MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFVGRPDPSFQYLKK

Sequences:

>Translated_312_residues
MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWGKCHPQDCDWGEVNAYAYAPG
VSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIYTRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMP
SVEEDCISFNPSTVTVKNLDGRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN
MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFVGRPDPSFQYLKK
>Mature_312_residues
MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWGKCHPQDCDWGEVNAYAYAPG
VSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIYTRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMP
SVEEDCISFNPSTVTVKNLDGRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN
MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFVGRPDPSFQYLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34542; Mature: 34542

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWG
CCEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC
KCHPQDCDWGEVNAYAYAPGVSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIY
CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE
TRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMPSVEEDCISFNPSTVTVKNLD
EEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECC
GRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN
CEEEEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC
MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFV
CCCHHCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEC
GRPDPSFQYLKK
CCCCCCHHHHCC
>Mature Secondary Structure
MKRITIPALLAIMLLLCQSLSFAAVSQFTGTWKNTDPNTAGVTKLSITGNGNSLRMRAWG
CCEECHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC
KCHPQDCDWGEVNAYAYAPGVSSDIDQNAQAVSALFTTGFSQTLVIVRPISRSSIRADIY
CCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEE
TRFTDNSGRSNYTASYTFNRQLIVGPIGPIGPIGPIRPMPSVEEDCISFNPSTVTVKNLD
EEEECCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEECC
GRWTIVDGNHLMFNFGPNRTEALQALRIIKHYRMNSSCFVGRPDPSFQYLLVNGRAPQGN
CEEEEEECCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCC
MPGEDCVSFNPNTIEVRNIGGSWKIVDGSHWVFDFGSKEDEARKAFAIIKKYGFTRSCFV
CCCHHCCCCCCCEEEEEECCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEC
GRPDPSFQYLKK
CCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA