| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355934
Identifier: 119355934
GI number: 119355934
Start: 99268
End: 100713
Strand: Reverse
Name: 119355934
Synonym: Cpha266_0084
Alternate gene names: NA
Gene position: 100713-99268 (Counterclockwise)
Preceding gene: 119355935
Following gene: 119355933
Centisome position: 3.21
GC content: 53.6
Gene sequence:
>1446_bases ATGATCATAAATTCGAGCGAACTGACAGGCGTGCTTCGCCAGTACAACCCCTGGTGGTCAGGGAACCGGTTCCCTGATCT TCCTGCATGGAAACGTGCAGCGTTTCATGAAATCGCCCATTGGGTGGAGAATCCCCCTGCAGGACGGGCGCTTCTGCTTT CAGGGGCCCGTCAGGTCGGCAAAACGACGCTGTTTCTGCAGGCTATTGACGAACTGCTTGCAAAAGGCATCCCTCCCGGC AACATCCTGTATGCGACATTCGACCATCCGCTGCTCAAACTGGCCGGGCTGGATGGCCTGCTTCGACTCTGGGATGAAGC GGAACCATCGAAACAGGGAACGGAATACCTGTTTCTGGATGAAATACAGTCGATCAAGGAGTGGCAGGTCTGGCTCAAAC ATCAGGTAGATTTCGAAAAGCGCCGGAGAATCGCCGTCACCGGTTCGGCAACTCCGCTTGCCATGGAAGGTCAGGAATCG GGCGTCGGGCGATGGCATACCATCAAACTCGCGACGCTCTCCTTCTATGAATACCTGAAGCTGAGAAACGATCCGGTTCC GAAACTGCCTGCCATCTCGTCTCTTGCCGACCTGTTCGACATGACCCCGGCATGGTTTTCAAAAACGGGTTCCGAAGCAA GAATCCTTACCGGTTTTTTCCACGAATACCTTCTGAGGGGCGGCTTCCCGCAAACCGCGACGGTAAGCAGTATTCCGCTT GCACAGAAACTCCTCCGCGAAGATATCGTCGATAAAATACTCAAGCGCGATATGACCGCGCTCTTCGGCGTCCGAAGGAT CATCGAGCTTGAACAGACCTTCCTCTATCTCTGCCTGCACGACGGAGGCATGCTCGACATGCAGGAACTCTCGAAGAATC TTGAGGTAAAAAGACCGACCGCCATGAGCTTCATATCGATCCTCGAAGCGACGCATCTGATTTACAGGCTGCAGCCATTC GGCTACGGGAAGGAAATACTCCGGGGAAAACATAAAATCTATCTTGCCGACCCGGCCATTGCCCCCGGAGTCCTTCTGAA AGGCATAAGTCTGCTCGATAACCCCACGCTTCTCGGCCAGGCAGCGGAAACGGCTTTTTTCAAACATGTATTCAGTCGTT ACTACGCACGAAGCATCGCATTTTCCTACTGGAGAGGAGGAAAGAAAGGGCTCGAAGTCGACATCATTGCCGATATAGGC GGTCGCTACGTACCTTTCGAAGTAAAATACCGGAGCACCGCGGTTGAAACCGCAGACCTGAAAGGACTTACCGAATTCTG CAGGACGCGAGCAGTCAACAAATCCTGCGTCATCACCAGAAACATGGAGGATTTCGGCATCATCCCGCTCACCGGCGATA ACAACATTCAGGCGCTCAAAATCCCCGCCCCGCTGGTATGCTACTGGCTTGGAGAATCGGAAACCACATCGGCTGTTGGA AGTTAG
Upstream 100 bases:
>100_bases ATCTCTGAAACAGTCAGAATCACACCCTGAAATCAAATTATTTGCTTGAAATCGCCTTTTATGTATAGTATACTATACTT AATAACGACATTCAAGACAA
Downstream 100 bases:
>100_bases AACGGTGAAACTCTCTTTGTATAAGAAATGCATGACGGCAAGGAAGCCGAGACCAGAAAAGCCTTCGCCATCATGAGGAA ATACTGAGTCACCCACATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVGKTTLFLQAIDELLAKGIPPG NILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLDEIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQES GVGRWHTIKLATLSFYEYLKLRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPTAMSFISILEATHLIYRLQPF GYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQAAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIG GRYVPFEVKYRSTAVETADLKGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG S
Sequences:
>Translated_481_residues MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVGKTTLFLQAIDELLAKGIPPG NILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLDEIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQES GVGRWHTIKLATLSFYEYLKLRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPTAMSFISILEATHLIYRLQPF GYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQAAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIG GRYVPFEVKYRSTAVETADLKGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG S >Mature_481_residues MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVGKTTLFLQAIDELLAKGIPPG NILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLDEIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQES GVGRWHTIKLATLSFYEYLKLRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPTAMSFISILEATHLIYRLQPF GYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQAAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIG GRYVPFEVKYRSTAVETADLKGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG S
Specific function: Unknown
COG id: COG1373
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1544 and MJ1637 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54050; Mature: 54050
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVG CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KTTLFLQAIDELLAKGIPPGNILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLD HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCCCCCCCCEEEHH EIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQESGVGRWHTIKLATLSFYEYLK HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHH LRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL HCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCCCCH AMSFISILEATHLIYRLQPFGYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQ HHHHHHHHHHHHHHHEECCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHH AAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIGGRYVPFEVKYRSTAVETADL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHH KGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG HHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCC S C >Mature Secondary Structure MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVG CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH KTTLFLQAIDELLAKGIPPGNILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLD HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCCCCCCCCEEEHH EIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQESGVGRWHTIKLATLSFYEYLK HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHH LRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL HCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCCCCH AMSFISILEATHLIYRLQPFGYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQ HHHHHHHHHHHHHHHEECCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHH AAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIGGRYVPFEVKYRSTAVETADL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHH KGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG HHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]