Definition Chlorobium phaeobacteroides DSM 266 chromosome, complete genome.
Accession NC_008639
Length 3,133,902

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The map label for this gene is 119355934

Identifier: 119355934

GI number: 119355934

Start: 99268

End: 100713

Strand: Reverse

Name: 119355934

Synonym: Cpha266_0084

Alternate gene names: NA

Gene position: 100713-99268 (Counterclockwise)

Preceding gene: 119355935

Following gene: 119355933

Centisome position: 3.21

GC content: 53.6

Gene sequence:

>1446_bases
ATGATCATAAATTCGAGCGAACTGACAGGCGTGCTTCGCCAGTACAACCCCTGGTGGTCAGGGAACCGGTTCCCTGATCT
TCCTGCATGGAAACGTGCAGCGTTTCATGAAATCGCCCATTGGGTGGAGAATCCCCCTGCAGGACGGGCGCTTCTGCTTT
CAGGGGCCCGTCAGGTCGGCAAAACGACGCTGTTTCTGCAGGCTATTGACGAACTGCTTGCAAAAGGCATCCCTCCCGGC
AACATCCTGTATGCGACATTCGACCATCCGCTGCTCAAACTGGCCGGGCTGGATGGCCTGCTTCGACTCTGGGATGAAGC
GGAACCATCGAAACAGGGAACGGAATACCTGTTTCTGGATGAAATACAGTCGATCAAGGAGTGGCAGGTCTGGCTCAAAC
ATCAGGTAGATTTCGAAAAGCGCCGGAGAATCGCCGTCACCGGTTCGGCAACTCCGCTTGCCATGGAAGGTCAGGAATCG
GGCGTCGGGCGATGGCATACCATCAAACTCGCGACGCTCTCCTTCTATGAATACCTGAAGCTGAGAAACGATCCGGTTCC
GAAACTGCCTGCCATCTCGTCTCTTGCCGACCTGTTCGACATGACCCCGGCATGGTTTTCAAAAACGGGTTCCGAAGCAA
GAATCCTTACCGGTTTTTTCCACGAATACCTTCTGAGGGGCGGCTTCCCGCAAACCGCGACGGTAAGCAGTATTCCGCTT
GCACAGAAACTCCTCCGCGAAGATATCGTCGATAAAATACTCAAGCGCGATATGACCGCGCTCTTCGGCGTCCGAAGGAT
CATCGAGCTTGAACAGACCTTCCTCTATCTCTGCCTGCACGACGGAGGCATGCTCGACATGCAGGAACTCTCGAAGAATC
TTGAGGTAAAAAGACCGACCGCCATGAGCTTCATATCGATCCTCGAAGCGACGCATCTGATTTACAGGCTGCAGCCATTC
GGCTACGGGAAGGAAATACTCCGGGGAAAACATAAAATCTATCTTGCCGACCCGGCCATTGCCCCCGGAGTCCTTCTGAA
AGGCATAAGTCTGCTCGATAACCCCACGCTTCTCGGCCAGGCAGCGGAAACGGCTTTTTTCAAACATGTATTCAGTCGTT
ACTACGCACGAAGCATCGCATTTTCCTACTGGAGAGGAGGAAAGAAAGGGCTCGAAGTCGACATCATTGCCGATATAGGC
GGTCGCTACGTACCTTTCGAAGTAAAATACCGGAGCACCGCGGTTGAAACCGCAGACCTGAAAGGACTTACCGAATTCTG
CAGGACGCGAGCAGTCAACAAATCCTGCGTCATCACCAGAAACATGGAGGATTTCGGCATCATCCCGCTCACCGGCGATA
ACAACATTCAGGCGCTCAAAATCCCCGCCCCGCTGGTATGCTACTGGCTTGGAGAATCGGAAACCACATCGGCTGTTGGA
AGTTAG

Upstream 100 bases:

>100_bases
ATCTCTGAAACAGTCAGAATCACACCCTGAAATCAAATTATTTGCTTGAAATCGCCTTTTATGTATAGTATACTATACTT
AATAACGACATTCAAGACAA

Downstream 100 bases:

>100_bases
AACGGTGAAACTCTCTTTGTATAAGAAATGCATGACGGCAAGGAAGCCGAGACCAGAAAAGCCTTCGCCATCATGAGGAA
ATACTGAGTCACCCACATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVGKTTLFLQAIDELLAKGIPPG
NILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLDEIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQES
GVGRWHTIKLATLSFYEYLKLRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL
AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPTAMSFISILEATHLIYRLQPF
GYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQAAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIG
GRYVPFEVKYRSTAVETADLKGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG
S

Sequences:

>Translated_481_residues
MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVGKTTLFLQAIDELLAKGIPPG
NILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLDEIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQES
GVGRWHTIKLATLSFYEYLKLRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL
AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPTAMSFISILEATHLIYRLQPF
GYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQAAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIG
GRYVPFEVKYRSTAVETADLKGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG
S
>Mature_481_residues
MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVGKTTLFLQAIDELLAKGIPPG
NILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLDEIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQES
GVGRWHTIKLATLSFYEYLKLRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL
AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPTAMSFISILEATHLIYRLQPF
GYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQAAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIG
GRYVPFEVKYRSTAVETADLKGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG
S

Specific function: Unknown

COG id: COG1373

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1544 and MJ1637 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54050; Mature: 54050

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KTTLFLQAIDELLAKGIPPGNILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLD
HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCCCCCCCCEEEHH
EIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQESGVGRWHTIKLATLSFYEYLK
HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHH
LRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL
HCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCCCCH
AMSFISILEATHLIYRLQPFGYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQ
HHHHHHHHHHHHHHHEECCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHH
AAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIGGRYVPFEVKYRSTAVETADL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHH
KGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG
HHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCC
S
C
>Mature Secondary Structure
MIINSSELTGVLRQYNPWWSGNRFPDLPAWKRAAFHEIAHWVENPPAGRALLLSGARQVG
CCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KTTLFLQAIDELLAKGIPPGNILYATFDHPLLKLAGLDGLLRLWDEAEPSKQGTEYLFLD
HHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCHHHHHHHCCCCCCCCCCCEEEHH
EIQSIKEWQVWLKHQVDFEKRRRIAVTGSATPLAMEGQESGVGRWHTIKLATLSFYEYLK
HHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCEEECCCCCCCCCEEEEEEHHHHHHHHHH
LRNDPVPKLPAISSLADLFDMTPAWFSKTGSEARILTGFFHEYLLRGGFPQTATVSSIPL
HCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHH
AQKLLREDIVDKILKRDMTALFGVRRIIELEQTFLYLCLHDGGMLDMQELSKNLEVKRPT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHCCCCCCCCH
AMSFISILEATHLIYRLQPFGYGKEILRGKHKIYLADPAIAPGVLLKGISLLDNPTLLGQ
HHHHHHHHHHHHHHHEECCCCCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCHHHH
AAETAFFKHVFSRYYARSIAFSYWRGGKKGLEVDIIADIGGRYVPFEVKYRSTAVETADL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEECCCHHHHHHH
KGLTEFCRTRAVNKSCVITRNMEDFGIIPLTGDNNIQALKIPAPLVCYWLGESETTSAVG
HHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]