| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355914
Identifier: 119355914
GI number: 119355914
Start: 73902
End: 74390
Strand: Direct
Name: 119355914
Synonym: Cpha266_0064
Alternate gene names: NA
Gene position: 73902-74390 (Clockwise)
Preceding gene: 119355913
Following gene: 119355915
Centisome position: 2.36
GC content: 53.78
Gene sequence:
>489_bases ATGAGCGTATCGATGAAATCGTGGGCCACCCCTTTGGCCATAGGCAGCTTCATCATTCTTGCCGTGACAGGCATCCTTAT GTTTTTCAAAATCGAAGGCGGCTACATCAAACCGGTGCACGAGTGGCTGAGCTGGGCAATGGTTGCCGGCGTGTTGCTTC ACATCTTCGCCAACTGGAAATCCTTTCTCGCATATTTCTCGAAAATTCCGGCGGTCTCGATTATCTCGATCGGCGTTATC GTCACGGCGCTTGCGGTGTTCATGCCCGCTTCCCGCGATGGTGGCAACCCAAAAATGAAGATGATGAAGGCCATCGAATC GGCCAGGCTTGAAACGGTCGCAGAAATCTCGGGCAAAGAGAGCAGCGAGATCGTTGCCGCGCTTAAAGAGAAAGGCATCA TGGTGGATGACCCGACTATGACCGTCCGCCAGATCGCCAGGACGAATAACAAGGAGGCGATGGAGGTGCTCGGGGTGGTG TTCAGGTAA
Upstream 100 bases:
>100_bases GAATCCATCCTGTTTTGACGTCATACTCCTTGTAACGGTTACCTTCCGGAACAGCGGCTGCGTCATATATTTTAAACACT TAACGGATAAAACAACGACT
Downstream 100 bases:
>100_bases AAGGAGAGCAGCATCTGTACGTATAAAGCCGGGCATCGTCCCGGTTTTTTTAATGTTCAGATTTCTGCTGCTGATCGGCA ATATTTTCTGTTATGTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSVSMKSWATPLAIGSFIILAVTGILMFFKIEGGYIKPVHEWLSWAMVAGVLLHIFANWKSFLAYFSKIPAVSIISIGVI VTALAVFMPASRDGGNPKMKMMKAIESARLETVAEISGKESSEIVAALKEKGIMVDDPTMTVRQIARTNNKEAMEVLGVV FR
Sequences:
>Translated_162_residues MSVSMKSWATPLAIGSFIILAVTGILMFFKIEGGYIKPVHEWLSWAMVAGVLLHIFANWKSFLAYFSKIPAVSIISIGVI VTALAVFMPASRDGGNPKMKMMKAIESARLETVAEISGKESSEIVAALKEKGIMVDDPTMTVRQIARTNNKEAMEVLGVV FR >Mature_161_residues SVSMKSWATPLAIGSFIILAVTGILMFFKIEGGYIKPVHEWLSWAMVAGVLLHIFANWKSFLAYFSKIPAVSIISIGVIV TALAVFMPASRDGGNPKMKMMKAIESARLETVAEISGKESSEIVAALKEKGIMVDDPTMTVRQIARTNNKEAMEVLGVVF R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17695; Mature: 17564
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSMKSWATPLAIGSFIILAVTGILMFFKIEGGYIKPVHEWLSWAMVAGVLLHIFANWK CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH SFLAYFSKIPAVSIISIGVIVTALAVFMPASRDGGNPKMKMMKAIESARLETVAEISGKE HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SSEIVAALKEKGIMVDDPTMTVRQIARTNNKEAMEVLGVVFR HHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SVSMKSWATPLAIGSFIILAVTGILMFFKIEGGYIKPVHEWLSWAMVAGVLLHIFANWK CCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH SFLAYFSKIPAVSIISIGVIVTALAVFMPASRDGGNPKMKMMKAIESARLETVAEISGKE HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC SSEIVAALKEKGIMVDDPTMTVRQIARTNNKEAMEVLGVVFR HHHHHHHHHHCCCEECCCHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA