| Definition | Chlorobium phaeobacteroides DSM 266 chromosome, complete genome. |
|---|---|
| Accession | NC_008639 |
| Length | 3,133,902 |
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The map label for this gene is 119355875
Identifier: 119355875
GI number: 119355875
Start: 20845
End: 22209
Strand: Reverse
Name: 119355875
Synonym: Cpha266_0024
Alternate gene names: NA
Gene position: 22209-20845 (Counterclockwise)
Preceding gene: 119355876
Following gene: 119355871
Centisome position: 0.71
GC content: 48.28
Gene sequence:
>1365_bases ATGAGAAAGTCAAAGAAGGCGGCAACAATGTCGCTGGTTCATCCCAATGCCGCGGGCATTGACATCGGATCGCAGTTTCA TGACGTTGCCATTCCACCGGATCGAGCAGAGGAAACAGTAAAAAGCTTCAAAAGCTTTACCGGTGATTTGCACGCTATGG CGAAATGGCTGACGGCATGCAGAATTGATACTATAGCAATGGAGTCGACTGGCGTGTACTGGATTCCGGCATTCGAAATT CTGGAAAACTACGGGTTCAAGGTGTTCTTGGTCAATGCCCGTGAAGCTAAAAATGTTCCCGGCAGGAAGACTGATAGCAA CGATGCCCAATGGCTTCAGAAATTGCATCAGCTCGGCTTGTTGCGCGCAAGTTTTCAGCCGACTTCAGTGATCGCTGAGT TGCGAGCCTATCTACGCCAACGCGAAAAGTTGCTTGACTACAAAGCGGCCCACATACAGCACATGCAGAAAGCCCTGATG CAGATGAACATCCAATTGCATCATGTCGTCTCGACAATTACGGGTAAAACCGGTATGGATATTATACGTGCAATTGTTGC GGGAAATCGCAACCCACAAGAACTGGTCAAATTCAGGGATGTCAGGTGCAAGAACTCAATTGAGACCATGACAGCTGCCC TGACCGGAAACTTCAAGCCTGAGCATATATTTGCCCTCATGCAGTCACTGGAACTCTACGACATCTACAACGAAAAAGCA GAGGCCTGCGATCGTGAAATTCAGGCTGTTCTTGACCGATTACAGCAAAACAGCATACCGCCGGATCAGCCGCTACCAAA AGCAAAATACAGGGAATGCAACAAAAATGCACCTGCTTTTGATGTTCGTCAAACACTGTTCAATATTATTGGCGTTGATC TGACGCAAATCACCGGACTGGGTTCCTATCTGGCATTGAAGCTCGTTTCCGAATGTGGAGCCGACATGTCGAAATGGCCC ACCGACAAACACTTCACATCATGGCTTTGCTTGTCTCCTGGTAACAAAATTTCAGGAGGCAAAATCCTGTCATCAAGAAC GCGTCCAAGCTCAAGTCGAGCAGCTGCCCTATTGAGGCTTGCTGCTACTGCCATAGGCCGAACTGAAACCGCCTTAGGCG CTTTTTATCGAAGACTTGCAACAAGAACTGGAAAAGCCAAGGCTGTCACTGCCACAGCTCGAAAGATTGCCGTCCTGTTC TATAACACGCTTCGATACGGAATGCGCTATGTTGACCCCGGAGCTGATTATTATGAAGAACAATACAAGGCAAGGATTCT GGGTCAGTTACGTCGCCGTGCTGACTCCTATGGGTTTTCTCTCCAACCCATGGAAATCCCTGATACGGCTATAGGAGTTT CTTAG
Upstream 100 bases:
>100_bases CATGCGGACTCAGCAGTGGTGACGTCTGAAAAGATGATCCCGTTTAGAAAAATGATTGTACCGCAAGCCCTCCTTTCGGC TTATTATTTCAGGAGGGTTC
Downstream 100 bases:
>100_bases AAAAAAAGCTAACCATGTACAACAAAGTTAAGGAATTTGCCCGAGAAGGATTAAGATCTTATTCGTAAATAATTTTGATA TACGTCAGCAAAATATTATG
Product: transposase
Products: NA
Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences; Pyruvate Water Dikinase; ISAfe3 Transposase
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MRKSKKAATMSLVHPNAAGIDIGSQFHDVAIPPDRAEETVKSFKSFTGDLHAMAKWLTACRIDTIAMESTGVYWIPAFEI LENYGFKVFLVNAREAKNVPGRKTDSNDAQWLQKLHQLGLLRASFQPTSVIAELRAYLRQREKLLDYKAAHIQHMQKALM QMNIQLHHVVSTITGKTGMDIIRAIVAGNRNPQELVKFRDVRCKNSIETMTAALTGNFKPEHIFALMQSLELYDIYNEKA EACDREIQAVLDRLQQNSIPPDQPLPKAKYRECNKNAPAFDVRQTLFNIIGVDLTQITGLGSYLALKLVSECGADMSKWP TDKHFTSWLCLSPGNKISGGKILSSRTRPSSSRAAALLRLAATAIGRTETALGAFYRRLATRTGKAKAVTATARKIAVLF YNTLRYGMRYVDPGADYYEEQYKARILGQLRRRADSYGFSLQPMEIPDTAIGVS
Sequences:
>Translated_454_residues MRKSKKAATMSLVHPNAAGIDIGSQFHDVAIPPDRAEETVKSFKSFTGDLHAMAKWLTACRIDTIAMESTGVYWIPAFEI LENYGFKVFLVNAREAKNVPGRKTDSNDAQWLQKLHQLGLLRASFQPTSVIAELRAYLRQREKLLDYKAAHIQHMQKALM QMNIQLHHVVSTITGKTGMDIIRAIVAGNRNPQELVKFRDVRCKNSIETMTAALTGNFKPEHIFALMQSLELYDIYNEKA EACDREIQAVLDRLQQNSIPPDQPLPKAKYRECNKNAPAFDVRQTLFNIIGVDLTQITGLGSYLALKLVSECGADMSKWP TDKHFTSWLCLSPGNKISGGKILSSRTRPSSSRAAALLRLAATAIGRTETALGAFYRRLATRTGKAKAVTATARKIAVLF YNTLRYGMRYVDPGADYYEEQYKARILGQLRRRADSYGFSLQPMEIPDTAIGVS >Mature_454_residues MRKSKKAATMSLVHPNAAGIDIGSQFHDVAIPPDRAEETVKSFKSFTGDLHAMAKWLTACRIDTIAMESTGVYWIPAFEI LENYGFKVFLVNAREAKNVPGRKTDSNDAQWLQKLHQLGLLRASFQPTSVIAELRAYLRQREKLLDYKAAHIQHMQKALM QMNIQLHHVVSTITGKTGMDIIRAIVAGNRNPQELVKFRDVRCKNSIETMTAALTGNFKPEHIFALMQSLELYDIYNEKA EACDREIQAVLDRLQQNSIPPDQPLPKAKYRECNKNAPAFDVRQTLFNIIGVDLTQITGLGSYLALKLVSECGADMSKWP TDKHFTSWLCLSPGNKISGGKILSSRTRPSSSRAAALLRLAATAIGRTETALGAFYRRLATRTGKAKAVTATARKIAVLF YNTLRYGMRYVDPGADYYEEQYKARILGQLRRRADSYGFSLQPMEIPDTAIGVS
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50794; Mature: 50794
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSKKAATMSLVHPNAAGIDIGSQFHDVAIPPDRAEETVKSFKSFTGDLHAMAKWLTAC CCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH RIDTIAMESTGVYWIPAFEILENYGFKVFLVNAREAKNVPGRKTDSNDAQWLQKLHQLGL HHHHEEECCCCEEEEHHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHH LRASFQPTSVIAELRAYLRQREKLLDYKAAHIQHMQKALMQMNIQLHHVVSTITGKTGMD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH IIRAIVAGNRNPQELVKFRDVRCKNSIETMTAALTGNFKPEHIFALMQSLELYDIYNEKA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EACDREIQAVLDRLQQNSIPPDQPLPKAKYRECNKNAPAFDVRQTLFNIIGVDLTQITGL HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCC GSYLALKLVSECGADMSKWPTDKHFTSWLCLSPGNKISGGKILSSRTRPSSSRAAALLRL HHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHH AATAIGRTETALGAFYRRLATRTGKAKAVTATARKIAVLFYNTLRYGMRYVDPGADYYEE HHHHHCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCEECCCCHHHHHH QYKARILGQLRRRADSYGFSLQPMEIPDTAIGVS HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MRKSKKAATMSLVHPNAAGIDIGSQFHDVAIPPDRAEETVKSFKSFTGDLHAMAKWLTAC CCCCHHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH RIDTIAMESTGVYWIPAFEILENYGFKVFLVNAREAKNVPGRKTDSNDAQWLQKLHQLGL HHHHEEECCCCEEEEHHHHHHHHCCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHH LRASFQPTSVIAELRAYLRQREKLLDYKAAHIQHMQKALMQMNIQLHHVVSTITGKTGMD HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHHH IIRAIVAGNRNPQELVKFRDVRCKNSIETMTAALTGNFKPEHIFALMQSLELYDIYNEKA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH EACDREIQAVLDRLQQNSIPPDQPLPKAKYRECNKNAPAFDVRQTLFNIIGVDLTQITGL HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCC GSYLALKLVSECGADMSKWPTDKHFTSWLCLSPGNKISGGKILSSRTRPSSSRAAALLRL HHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHH AATAIGRTETALGAFYRRLATRTGKAKAVTATARKIAVLFYNTLRYGMRYVDPGADYYEE HHHHHCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCEECCCCHHHHHH QYKARILGQLRRRADSYGFSLQPMEIPDTAIGVS HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA