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The map label for this gene is 119355869

Identifier: 119355869

GI number: 119355869

Start: 11704

End: 12462

Strand: Direct

Name: 119355869

Synonym: Cpha266_0015

Alternate gene names: NA

Gene position: 11704-12462 (Clockwise)

Preceding gene: 119355865

Following gene: 119355870

Centisome position: 0.37

GC content: 46.38

Gene sequence:

>759_bases
ATGGATGCAACCGTCATTGATCTCTGCCTGAGAGTTTTTCCCTGGGCAGAATTCCGTCAACGCAAGGGAGCCATCAAATT
GCACTACCTCTATGATCACCGTAGCTCGTTGCCGGCATTCATGGTCATGACTGATGGCAAAAAGAGCGATATCCGGGTGG
CAAGAAGCCAGGAGAAACTTGATTTTCACCTGCTGCCGGACAGCATCGTTTCGTTTGACCGGGCCTATATCGACTTCGAA
TGGCTGTACACCCTTGATCAGCGCAAGGTCTGGTTCGTGACCCGCTCAAAAGCAAACATTCAGTACCGAATCATCGGACA
GCATCAACCGATCAAAAACAAGCAGGTAACACGAGACGAAAGAATCGAACTGATAATCGAGAAATCGAGAGCAAAATATC
TAAAACCGCTTCGATTGGTCTGCTATACTGATCAAGAAACCGGCAAGGCGTATGAGTTCATTACCAACAACATAAAACTC
GCAGCCTCAACGATCGCAGCCATTTACAAGTCACGCTGGCAGATCGAAACGTTCTTCAGGTGGATCAAGCAAAACCTAAA
AATCAAATCATTCCAGGGCACCAGTCAGAATGCGGTATTGTCGCAGACCTGGATAGCCATGTGCTACTATCTCCGGTTAT
CATACATCAAGTTTAAGACAAAATACCGACATTCATTGCAGGAATTGACCAGAATGATCGCTGCTGTACTCATAGAGCAT
CGCCTGTTGATCGATATTTCGTCTCTAAGGAGTCGTTAA

Upstream 100 bases:

>100_bases
CAATTTCTCCTGCTTAAACGTTGCTCTATGAAAACATAATAAGGGGTATTTTAGTATTTACCAAATCCCTAAGTTCCGGT
TCAAGAATACACTTTTCTCA

Downstream 100 bases:

>100_bases
TAAATAAATAGTACAAATTCAGGGTGACCGAGGATCAATTCTATAGTTCCACTCACCATGAAAATCATTTCGGGTAATCT
GAATGCTTTTGAACTCTGTC

Product: transposase, IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MDATVIDLCLRVFPWAEFRQRKGAIKLHYLYDHRSSLPAFMVMTDGKKSDIRVARSQEKLDFHLLPDSIVSFDRAYIDFE
WLYTLDQRKVWFVTRSKANIQYRIIGQHQPIKNKQVTRDERIELIIEKSRAKYLKPLRLVCYTDQETGKAYEFITNNIKL
AASTIAAIYKSRWQIETFFRWIKQNLKIKSFQGTSQNAVLSQTWIAMCYYLRLSYIKFKTKYRHSLQELTRMIAAVLIEH
RLLIDISSLRSR

Sequences:

>Translated_252_residues
MDATVIDLCLRVFPWAEFRQRKGAIKLHYLYDHRSSLPAFMVMTDGKKSDIRVARSQEKLDFHLLPDSIVSFDRAYIDFE
WLYTLDQRKVWFVTRSKANIQYRIIGQHQPIKNKQVTRDERIELIIEKSRAKYLKPLRLVCYTDQETGKAYEFITNNIKL
AASTIAAIYKSRWQIETFFRWIKQNLKIKSFQGTSQNAVLSQTWIAMCYYLRLSYIKFKTKYRHSLQELTRMIAAVLIEH
RLLIDISSLRSR
>Mature_252_residues
MDATVIDLCLRVFPWAEFRQRKGAIKLHYLYDHRSSLPAFMVMTDGKKSDIRVARSQEKLDFHLLPDSIVSFDRAYIDFE
WLYTLDQRKVWFVTRSKANIQYRIIGQHQPIKNKQVTRDERIELIIEKSRAKYLKPLRLVCYTDQETGKAYEFITNNIKL
AASTIAAIYKSRWQIETFFRWIKQNLKIKSFQGTSQNAVLSQTWIAMCYYLRLSYIKFKTKYRHSLQELTRMIAAVLIEH
RLLIDISSLRSR

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 30044; Mature: 30044

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATVIDLCLRVFPWAEFRQRKGAIKLHYLYDHRSSLPAFMVMTDGKKSDIRVARSQEKL
CCHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCC
DFHLLPDSIVSFDRAYIDFEWLYTLDQRKVWFVTRSKANIQYRIIGQHQPIKNKQVTRDE
EEEECCHHHHHHHHHEEEEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHH
RIELIIEKSRAKYLKPLRLVCYTDQETGKAYEFITNNIKLAASTIAAIYKSRWQIETFFR
HHHHEEEHHHHHHCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
WIKQNLKIKSFQGTSQNAVLSQTWIAMCYYLRLSYIKFKTKYRHSLQELTRMIAAVLIEH
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLIDISSLRSR
HHEEEHHHHCCC
>Mature Secondary Structure
MDATVIDLCLRVFPWAEFRQRKGAIKLHYLYDHRSSLPAFMVMTDGKKSDIRVARSQEKL
CCHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCEEEEEECCCCCCEEEECCCCCC
DFHLLPDSIVSFDRAYIDFEWLYTLDQRKVWFVTRSKANIQYRIIGQHQPIKNKQVTRDE
EEEECCHHHHHHHHHEEEEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHH
RIELIIEKSRAKYLKPLRLVCYTDQETGKAYEFITNNIKLAASTIAAIYKSRWQIETFFR
HHHHEEEHHHHHHCCCEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
WIKQNLKIKSFQGTSQNAVLSQTWIAMCYYLRLSYIKFKTKYRHSLQELTRMIAAVLIEH
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLIDISSLRSR
HHEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]