| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581966
Identifier: 118581966
GI number: 118581966
Start: 3941375
End: 3944077
Strand: Reverse
Name: 118581966
Synonym: Ppro_3567
Alternate gene names: NA
Gene position: 3944077-3941375 (Counterclockwise)
Preceding gene: 118581967
Following gene: 118581965
Centisome position: 98.41
GC content: 53.39
Gene sequence:
>2703_bases ATGGGCACCCTTCTTCTGGAGGTTACAATGTTAAAGAACAAATTTTTCCCCCTCCTGATACTGGTTTCAGTACTTTTGTC ACTGATTTCGTATCTCCTGAATCTGTATTCCGATTGGCTGTTTTTCGACGAAACGGGATTCTCATCGGTCTTCACCACGA CTCTGTATGCAAAGACTGGGGCCGGTTTGCTCTTCGGCGGACTCTTGTTCCTGTTTGTACAGATAAACCTTCACGTTGCG AACAGGGCGCAGTTTCCCCTGTCCGGCATGCATCTCCTGGGAGCAGGCAACCTCGGGATAAACCGGGATCAAGCGGTTCG TCTTTGTAAGCCGGTCAGCATGCTCGTCAGTTTTGTCCTGGCGCTTCTTGCGGGCAATCTGGGCGCCATGAAATGGAAAG ATCTGCTCTTCTTCGCCAATCGCCTGACTGTTGGAACCGTGGATCCGCTCATCGGCAAGGATGTGGGGTTCTACCTGTTC AGTCTGCCGCTTTTGGATGCGGTCAAGGGGGTCTCGGGCTTTATCATTCTGGCTGCGGCGGCATTGGCAACGGCTGTGTA TTATGTTCGGGGTGGCATACTGCTGACCGAGCGAGGTGTGGCTATTGATGAAAAAGTTCGCCGTCATCTGGCTGTTCTGG TGGGAATCTTTGCGTGCGCCGTCGCCGCGGGCTTCTATCTGGACAGCTTCAAGCTGCTGTATGCCGATAACGGTGCTTTT TATGGCGCGGGGTATGTGGATGTCAACTCACGACTGCTGACCTACAGAGTTCTGACGTTCCTGACACCATTGGCGGGAGC CATGCTGGCGATCGGGATCTGGAAAGGCGTCTGGCGGATGGCGCTGCTGGCGCCTGCCATTGTGGTCGCACTCTACATGC TCGGCATCCGTGTCTATCCGGGTGTTCTGCAGAAATTCAAGGTCGCGCCCAACGAGATGGCCCTTGAGACGCCCTACATA ATGAATAACATTACCGCAACCCGTTTCGGCTATGATCTGGAAAAAATCGAGACGGTGCCCTTCGATGTTGATACGAAACT TACCGCCGCTGATATAGCCAACAACGATGCAACCATCAAAAACATCAGACTATGGGACCATGCCCCGCTGCTGAAGACGT ACAGCCAGCTACAGCAGATCAGGACCTACTACAAGTTTTTCGATGTGGATAATGACCGCTACATGGTCAACGGGCGCTAC TCGCAGGTCATGCTGTCGCCGCGTGAACTTTCCTACGCCGATCTGCCCAGCAAGAACTGGATCAACGAGCGCCTGATTTT CACCCACGGCAATGGCATTACGTTCGGTCCGGTCAGCAGAATCAGCAAAGAGGGACTACCCGAGTTTTTCGTCAAGGATA TTCCAGCCGTCAGTCTGGCCGATATCAAGGTAAGCAGACCTGAAATCTATTACGGCGAGCTGTCCAATGAGTATGTGATC GTCAAAACCAACGTGCCGGAGTTCAGCTACCCGACCGCCACCGGCAACATCACTACGACGTATGCCGGCACAGGCGGGGT GCCGATGGATTCGCTCCTGAAAAAAGCGCTCTTTGCCGCAAAATTCAGAACGGAAAAGATTCTGCTCTCCTCGGATATCA CCAAAGAGAGTCGCATCCTTTACAACCGCAACATTAACGAACGAATCAGAACCATAGCGCCTTTCCTCCATTTTGACAGC GATCCCTACCTAGTGGTGGATCAAAAGGGACGGCTCAAGTGGATAATTGATGCCTACACCCATTCGACCCGGCTCCCCTA TTCAAGGCCGCTCAAAGGCGGCATCAATTACATCCGGAATTCAGTCAAGACGGTTGTGGACGCCTATGACGGCTCTGTTG ACTTCTATATCAGCGATCCGGATGACGTCATTCTCAAGGTTCATGGGCGGATCTTCCCGAAACTCTTCAAACCAATGGCG GAAATGCCGGGCGATCTGCGCAAGCACGTTCGCTACCCGCACCATTTGCTGCAGATCCAGGCAGCCATGTTCGCCACCTA CCACATGACCGACCCCAAGGTATTCTACAACAAGGAAAACCTCTGGGAGATTCCCGTGCTCGGCGATAAGGCGATGGAGC CGTATTATACGATCATGAAGCTGCCGGGTGAAAAAGCGGAGGAGTACATACTGCTGCTGCCGTTTACCCCTTCAAAGCGG GACAATCTGGCTGCCTGGCTTACGGCCCGCTGCGATGAACCGCAGTACGGAAAAATCCGTGCCTACACCTTCCCGCGTGA CCGCCTGATCTACGGACCGAAACAGATCGATGCGCGCATCAACCAGGATTCTTTTATTTCTCAGCAGTTGACCCTCTGGA GTCAACGCGGCTCCGAGGCCATCCGGGGCAGTTTGCTGGTAATACCCATCGAAAAGTCGCTGCTTTATGTTCAGCCGCTC TTTCTTGCGGCAGACAAAGCCGGCCTTCCGGAATTGAAGAGGGTAATTGTCGCCTTCGGAGATCAACTGGTCATGGAGGA AAACCTGGAACTGGCGCTGCAAAGGATTTTCGGCGGGAAAAAAGCCGCACCTGCTGCAACCAGCGGAGTTTCGGCAGACA CACAAGCATCGCCTGCCACGCTTGCCAAGGAAGCTGTGAGCATTTATGAGAAGGCCATCACTTTGCAACGTCAGGGCAAC TGGGCCGCCTATGGCGAAGAATTGAGAAGCCTGGAACAGATTCTGAAGAAAATGGCCCGGTAG
Upstream 100 bases:
>100_bases TTTTTGGGGGCGCCTCCGGAACCGGATCGCTCGACGCACGACAACCCATACTGACGTTCATCTCTGAATCTGTGCGGCAG TACCCTAGGGGAGCCCAACC
Downstream 100 bases:
>100_bases CAGCACAACAACGTCCATGGGCCGAACATCACACAAAGGAGCAGAGAAGATGAATAAAAGTATCGTCAGGATTTTCACGC TAATGGCAGCCATCATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 900; Mature: 899
Protein sequence:
>900_residues MGTLLLEVTMLKNKFFPLLILVSVLLSLISYLLNLYSDWLFFDETGFSSVFTTTLYAKTGAGLLFGGLLFLFVQINLHVA NRAQFPLSGMHLLGAGNLGINRDQAVRLCKPVSMLVSFVLALLAGNLGAMKWKDLLFFANRLTVGTVDPLIGKDVGFYLF SLPLLDAVKGVSGFIILAAAALATAVYYVRGGILLTERGVAIDEKVRRHLAVLVGIFACAVAAGFYLDSFKLLYADNGAF YGAGYVDVNSRLLTYRVLTFLTPLAGAMLAIGIWKGVWRMALLAPAIVVALYMLGIRVYPGVLQKFKVAPNEMALETPYI MNNITATRFGYDLEKIETVPFDVDTKLTAADIANNDATIKNIRLWDHAPLLKTYSQLQQIRTYYKFFDVDNDRYMVNGRY SQVMLSPRELSYADLPSKNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIKVSRPEIYYGELSNEYVI VKTNVPEFSYPTATGNITTTYAGTGGVPMDSLLKKALFAAKFRTEKILLSSDITKESRILYNRNINERIRTIAPFLHFDS DPYLVVDQKGRLKWIIDAYTHSTRLPYSRPLKGGINYIRNSVKTVVDAYDGSVDFYISDPDDVILKVHGRIFPKLFKPMA EMPGDLRKHVRYPHHLLQIQAAMFATYHMTDPKVFYNKENLWEIPVLGDKAMEPYYTIMKLPGEKAEEYILLLPFTPSKR DNLAAWLTARCDEPQYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWSQRGSEAIRGSLLVIPIEKSLLYVQPL FLAADKAGLPELKRVIVAFGDQLVMEENLELALQRIFGGKKAAPAATSGVSADTQASPATLAKEAVSIYEKAITLQRQGN WAAYGEELRSLEQILKKMAR
Sequences:
>Translated_900_residues MGTLLLEVTMLKNKFFPLLILVSVLLSLISYLLNLYSDWLFFDETGFSSVFTTTLYAKTGAGLLFGGLLFLFVQINLHVA NRAQFPLSGMHLLGAGNLGINRDQAVRLCKPVSMLVSFVLALLAGNLGAMKWKDLLFFANRLTVGTVDPLIGKDVGFYLF SLPLLDAVKGVSGFIILAAAALATAVYYVRGGILLTERGVAIDEKVRRHLAVLVGIFACAVAAGFYLDSFKLLYADNGAF YGAGYVDVNSRLLTYRVLTFLTPLAGAMLAIGIWKGVWRMALLAPAIVVALYMLGIRVYPGVLQKFKVAPNEMALETPYI MNNITATRFGYDLEKIETVPFDVDTKLTAADIANNDATIKNIRLWDHAPLLKTYSQLQQIRTYYKFFDVDNDRYMVNGRY SQVMLSPRELSYADLPSKNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIKVSRPEIYYGELSNEYVI VKTNVPEFSYPTATGNITTTYAGTGGVPMDSLLKKALFAAKFRTEKILLSSDITKESRILYNRNINERIRTIAPFLHFDS DPYLVVDQKGRLKWIIDAYTHSTRLPYSRPLKGGINYIRNSVKTVVDAYDGSVDFYISDPDDVILKVHGRIFPKLFKPMA EMPGDLRKHVRYPHHLLQIQAAMFATYHMTDPKVFYNKENLWEIPVLGDKAMEPYYTIMKLPGEKAEEYILLLPFTPSKR DNLAAWLTARCDEPQYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWSQRGSEAIRGSLLVIPIEKSLLYVQPL FLAADKAGLPELKRVIVAFGDQLVMEENLELALQRIFGGKKAAPAATSGVSADTQASPATLAKEAVSIYEKAITLQRQGN WAAYGEELRSLEQILKKMAR >Mature_899_residues GTLLLEVTMLKNKFFPLLILVSVLLSLISYLLNLYSDWLFFDETGFSSVFTTTLYAKTGAGLLFGGLLFLFVQINLHVAN RAQFPLSGMHLLGAGNLGINRDQAVRLCKPVSMLVSFVLALLAGNLGAMKWKDLLFFANRLTVGTVDPLIGKDVGFYLFS LPLLDAVKGVSGFIILAAAALATAVYYVRGGILLTERGVAIDEKVRRHLAVLVGIFACAVAAGFYLDSFKLLYADNGAFY GAGYVDVNSRLLTYRVLTFLTPLAGAMLAIGIWKGVWRMALLAPAIVVALYMLGIRVYPGVLQKFKVAPNEMALETPYIM NNITATRFGYDLEKIETVPFDVDTKLTAADIANNDATIKNIRLWDHAPLLKTYSQLQQIRTYYKFFDVDNDRYMVNGRYS QVMLSPRELSYADLPSKNWINERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIKVSRPEIYYGELSNEYVIV KTNVPEFSYPTATGNITTTYAGTGGVPMDSLLKKALFAAKFRTEKILLSSDITKESRILYNRNINERIRTIAPFLHFDSD PYLVVDQKGRLKWIIDAYTHSTRLPYSRPLKGGINYIRNSVKTVVDAYDGSVDFYISDPDDVILKVHGRIFPKLFKPMAE MPGDLRKHVRYPHHLLQIQAAMFATYHMTDPKVFYNKENLWEIPVLGDKAMEPYYTIMKLPGEKAEEYILLLPFTPSKRD NLAAWLTARCDEPQYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWSQRGSEAIRGSLLVIPIEKSLLYVQPLF LAADKAGLPELKRVIVAFGDQLVMEENLELALQRIFGGKKAAPAATSGVSADTQASPATLAKEAVSIYEKAITLQRQGNW AAYGEELRSLEQILKKMAR
Specific function: Unknown
COG id: COG1615
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0182 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3567_PELPD (A1AUY8)
Other databases:
- EMBL: CP000482 - RefSeq: YP_903216.1 - STRING: A1AUY8 - GeneID: 4572038 - GenomeReviews: CP000482_GR - KEGG: ppd:Ppro_3567 - eggNOG: COG1615 - HOGENOM: HBG538831 - OMA: MLPSPYA - ProtClustDB: CLSK828803 - HAMAP: MF_01600 - InterPro: IPR005372
Pfam domain/function: PF03699 UPF0182
EC number: NA
Molecular weight: Translated: 100798; Mature: 100667
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x271de0b8)-; HASH(0x2806cc68)-; HASH(0x283b8724)-; HASH(0x282e7b28)-; HASH(0x2834e9e8)-; HASH(0x413c7128)-; HASH(0x27c9de70)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLLLEVTMLKNKFFPLLILVSVLLSLISYLLNLYSDWLFFDETGFSSVFTTTLYAKTG CCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCC AGLLFGGLLFLFVQINLHVANRAQFPLSGMHLLGAGNLGINRDQAVRLCKPVSMLVSFVL CHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH ALLAGNLGAMKWKDLLFFANRLTVGTVDPLIGKDVGFYLFSLPLLDAVKGVSGFIILAAA HHHHCCCCCHHHHHHHHHHHCCEECCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ALATAVYYVRGGILLTERGVAIDEKVRRHLAVLVGIFACAVAAGFYLDSFKLLYADNGAF HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCE YGAGYVDVNSRLLTYRVLTFLTPLAGAMLAIGIWKGVWRMALLAPAIVVALYMLGIRVYP EECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLQKFKVAPNEMALETPYIMNNITATRFGYDLEKIETVPFDVDTKLTAADIANNDATIK HHHHHHHCCCCHHEECCCHHHCCCCHHHCCCCHHHHEECCCCCCCCEEEHHCCCCCCEEE NIRLWDHAPLLKTYSQLQQIRTYYKFFDVDNDRYMVNGRYSQVMLSPRELSYADLPSKNW EEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCC INERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIKVSRPEIYYGELSNEYVI CCCEEEEECCCCCEECCHHHHHHCCCHHHHHHCCCCCEEEEEEECCCEEEEECCCCCEEE VKTNVPEFSYPTATGNITTTYAGTGGVPMDSLLKKALFAAKFRTEKILLSSDITKESRIL EEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHEE YNRNINERIRTIAPFLHFDSDPYLVVDQKGRLKWIIDAYTHSTRLPYSRPLKGGINYIRN ECCCHHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH SVKTVVDAYDGSVDFYISDPDDVILKVHGRIFPKLFKPMAEMPGDLRKHVRYPHHLLQIQ HHHHHHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHH AAMFATYHMTDPKVFYNKENLWEIPVLGDKAMEPYYTIMKLPGEKAEEYILLLPFTPSKR HHHHHEEECCCCEEEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCC DNLAAWLTARCDEPQYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWSQRGSEA CCEEEEEEECCCCCCCCCEEEEECCCCCEEECCHHHHCCCCCHHHHHHHHHHHHHCCCHH IRGSLLVIPIEKSLLYVQPLFLAADKAGLPELKRVIVAFGDQLVMEENLELALQRIFGGK HCCCEEEEEECCCEEEHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC KAAPAATSGVSADTQASPATLAKEAVSIYEKAITLQRQGNWAAYGEELRSLEQILKKMAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure GTLLLEVTMLKNKFFPLLILVSVLLSLISYLLNLYSDWLFFDETGFSSVFTTTLYAKTG CEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHCC AGLLFGGLLFLFVQINLHVANRAQFPLSGMHLLGAGNLGINRDQAVRLCKPVSMLVSFVL CHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH ALLAGNLGAMKWKDLLFFANRLTVGTVDPLIGKDVGFYLFSLPLLDAVKGVSGFIILAAA HHHHCCCCCHHHHHHHHHHHCCEECCCCHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ALATAVYYVRGGILLTERGVAIDEKVRRHLAVLVGIFACAVAAGFYLDSFKLLYADNGAF HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCE YGAGYVDVNSRLLTYRVLTFLTPLAGAMLAIGIWKGVWRMALLAPAIVVALYMLGIRVYP EECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLQKFKVAPNEMALETPYIMNNITATRFGYDLEKIETVPFDVDTKLTAADIANNDATIK HHHHHHHCCCCHHEECCCHHHCCCCHHHCCCCHHHHEECCCCCCCCEEEHHCCCCCCEEE NIRLWDHAPLLKTYSQLQQIRTYYKFFDVDNDRYMVNGRYSQVMLSPRELSYADLPSKNW EEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCC INERLIFTHGNGITFGPVSRISKEGLPEFFVKDIPAVSLADIKVSRPEIYYGELSNEYVI CCCEEEEECCCCCEECCHHHHHHCCCHHHHHHCCCCCEEEEEEECCCEEEEECCCCCEEE VKTNVPEFSYPTATGNITTTYAGTGGVPMDSLLKKALFAAKFRTEKILLSSDITKESRIL EEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCHHEE YNRNINERIRTIAPFLHFDSDPYLVVDQKGRLKWIIDAYTHSTRLPYSRPLKGGINYIRN ECCCHHHHHHHHHHHHEECCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH SVKTVVDAYDGSVDFYISDPDDVILKVHGRIFPKLFKPMAEMPGDLRKHVRYPHHLLQIQ HHHHHHHHCCCCEEEEECCCCCEEEEECCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHH AAMFATYHMTDPKVFYNKENLWEIPVLGDKAMEPYYTIMKLPGEKAEEYILLLPFTPSKR HHHHHEEECCCCEEEECCCCCEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCC DNLAAWLTARCDEPQYGKIRAYTFPRDRLIYGPKQIDARINQDSFISQQLTLWSQRGSEA CCEEEEEEECCCCCCCCCEEEEECCCCCEEECCHHHHCCCCCHHHHHHHHHHHHHCCCHH IRGSLLVIPIEKSLLYVQPLFLAADKAGLPELKRVIVAFGDQLVMEENLELALQRIFGGK HCCCEEEEEECCCEEEHHHHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC KAAPAATSGVSADTQASPATLAKEAVSIYEKAITLQRQGNWAAYGEELRSLEQILKKMAR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA