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The map label for this gene is rpfG [H]

Identifier: 118581878

GI number: 118581878

Start: 3840577

End: 3841017

Strand: Reverse

Name: rpfG [H]

Synonym: Ppro_3478

Alternate gene names: 118581878

Gene position: 3841017-3840577 (Counterclockwise)

Preceding gene: 118581879

Following gene: 118581873

Centisome position: 95.83

GC content: 55.78

Gene sequence:

>441_bases
ATGCACGATGTGGGAAAAATCGGTGTACCGGATGCTATCCTTCGTAAGCAGGAGGGGCTCACTGCCGAGGAATTCGAGGT
AATGAAGCGGCACACAATTATCGGGGAGCGGTTTCTGCGTGGCTCCTCCTTCCCCATGTTGCAGATGGCGGCCTCCATTG
CGCGTAATCATCATGAACGGTGGGATGGGAGCGGCTACCCCCATGGCCTGCGGGGCGAAGAGATCCCGCTGGAAGCCAGA
ATTGTCATGTTGGTGGATCAGTACGACGCCCTGCGCTGCAAACGAATCTACAAGCAGGCATTCTCTCATCAGGAGGCCTG
CCACATCATCGGCAACGGGGATGGCCGAACCATGCCTGACCATTTCGATCTTCGGGTTCTGAATGCCTTCAGGCTGCAGG
CCGGGATGTTTGATACGATTTTCAGCGAGAACAGTGATTGA

Upstream 100 bases:

>100_bases
AGGTTGCCGGTGGGAAGACGAACACATACGGAACTTTTTTAATCGGCTTGGCCACAAAAGAGGGCGCCCCTGAGGTCAAG
CCCGACAGACTCCTAGTGCA

Downstream 100 bases:

>100_bases
TGAGGCGGGTGGCCAGGAGTTGGGATTGGAATTACGGTCGTTGCCCTCTCTCCCGCTGCCAGTTCAGCGGATTATGCTCT
CCGACACCCCTGCCAGGTGC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHDVGKIGVPDAILRKQEGLTAEEFEVMKRHTIIGERFLRGSSFPMLQMAASIARNHHERWDGSGYPHGLRGEEIPLEAR
IVMLVDQYDALRCKRIYKQAFSHQEACHIIGNGDGRTMPDHFDLRVLNAFRLQAGMFDTIFSENSD

Sequences:

>Translated_146_residues
MHDVGKIGVPDAILRKQEGLTAEEFEVMKRHTIIGERFLRGSSFPMLQMAASIARNHHERWDGSGYPHGLRGEEIPLEAR
IVMLVDQYDALRCKRIYKQAFSHQEACHIIGNGDGRTMPDHFDLRVLNAFRLQAGMFDTIFSENSD
>Mature_146_residues
MHDVGKIGVPDAILRKQEGLTAEEFEVMKRHTIIGERFLRGSSFPMLQMAASIARNHHERWDGSGYPHGLRGEEIPLEAR
IVMLVDQYDALRCKRIYKQAFSHQEACHIIGNGDGRTMPDHFDLRVLNAFRLQAGMFDTIFSENSD

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 16668; Mature: 16668

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDVGKIGVPDAILRKQEGLTAEEFEVMKRHTIIGERFLRGSSFPMLQMAASIARNHHER
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
WDGSGYPHGLRGEEIPLEARIVMLVDQYDALRCKRIYKQAFSHQEACHIIGNGDGRTMPD
CCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
HFDLRVLNAFRLQAGMFDTIFSENSD
CHHHHHHHHHHHHHCHHHHHHCCCCC
>Mature Secondary Structure
MHDVGKIGVPDAILRKQEGLTAEEFEVMKRHTIIGERFLRGSSFPMLQMAASIARNHHER
CCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
WDGSGYPHGLRGEEIPLEARIVMLVDQYDALRCKRIYKQAFSHQEACHIIGNGDGRTMPD
CCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC
HFDLRVLNAFRLQAGMFDTIFSENSD
CHHHHHHHHHHHHHCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]