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The map label for this gene is fliR [H]

Identifier: 118581842

GI number: 118581842

Start: 3801079

End: 3801873

Strand: Direct

Name: fliR [H]

Synonym: Ppro_3442

Alternate gene names: 118581842

Gene position: 3801079-3801873 (Clockwise)

Preceding gene: 118581841

Following gene: 118581843

Centisome position: 94.84

GC content: 52.45

Gene sequence:

>795_bases
ATGTTTCCTCTGCTCCCCTTCCCTTCCCAGCGGGAGATCATTCTCTTTGCGCTCGTGCTTGGCAGGATGGCGGGGATGTT
CAGCGCGTTACCGGTATTCGGCGGCAAGCGACTGCCGCTGCAGATCAGGGTCGTCGCCGTGATGGCGATGAGCCTGATCT
GTTTTCCCCTTTTGAACGTGAATGCACCCAATATACCCGACGACACTATCTCCCTGGCGTTGCTGGCGCTTCGTGAAGTC
ATGATTGGCATTACCCTCTCCTTTGTGACCCAGATCATCTTCTCAGCAGTTGAATTCAGCGGGCAAATCATAGGCATGCA
AATGGGATTCACCATGGCGGCGATAATGGACCCGACCCACGGCACCCAGAGCCAGGTCATGTCGGTAATGCAAAGTCTTC
TGGCCACGCTGATGTTTCTCTGCATGAGCATTCACCACCTGTTCATTCGGGCCATTGTTGACAGCTTTCACATAATTCCC
CTTGGCGTCTGGCATCTCAACGGAGAAATAATAACCTTCCTCACCAGGGCAACCGCTGATGTTTTCGTTCTCGGTGTTCG
ACTGGCAGCTCCGGTAATGGTTGCACTGCTGCTCACCAGCGTGACGCTCGGCATCATGGCTCGCTCTTTCCCCCAGATGA
ATGTCTTCATGATCAGCTTTCCACTCAATATCGGAATTGGATTTATCATTCTTGGTGCGACACTGCCTATGTTCTTCCAT
GTTCTCGAGGTGTCGTTCGGTTCCGTCAAGGAGCAGATTGATACAATATTCCGATTAATGGCAAAGGGGGGATGA

Upstream 100 bases:

>100_bases
ATGGTTGCCATGGTCATCTTTTTTCCCTGGATGATGACCTATATGTGCGACTTCACCCGCGAAATCTATTCCTTCATCTC
CATCATGAGGCGCTGACCCC

Downstream 100 bases:

>100_bases
TTCCTGAGCCAGGACGCAGACAAGCATTCCAAAACAGAGCAACCCACTGCAAAAAAACTCGAGAAATCGCGGGAAAAGGG
TTCCCCGCCCACCAGTATCA

Product: flagellar biosynthetic protein FliR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MFPLLPFPSQREIILFALVLGRMAGMFSALPVFGGKRLPLQIRVVAVMAMSLICFPLLNVNAPNIPDDTISLALLALREV
MIGITLSFVTQIIFSAVEFSGQIIGMQMGFTMAAIMDPTHGTQSQVMSVMQSLLATLMFLCMSIHHLFIRAIVDSFHIIP
LGVWHLNGEIITFLTRATADVFVLGVRLAAPVMVALLLTSVTLGIMARSFPQMNVFMISFPLNIGIGFIILGATLPMFFH
VLEVSFGSVKEQIDTIFRLMAKGG

Sequences:

>Translated_264_residues
MFPLLPFPSQREIILFALVLGRMAGMFSALPVFGGKRLPLQIRVVAVMAMSLICFPLLNVNAPNIPDDTISLALLALREV
MIGITLSFVTQIIFSAVEFSGQIIGMQMGFTMAAIMDPTHGTQSQVMSVMQSLLATLMFLCMSIHHLFIRAIVDSFHIIP
LGVWHLNGEIITFLTRATADVFVLGVRLAAPVMVALLLTSVTLGIMARSFPQMNVFMISFPLNIGIGFIILGATLPMFFH
VLEVSFGSVKEQIDTIFRLMAKGG
>Mature_264_residues
MFPLLPFPSQREIILFALVLGRMAGMFSALPVFGGKRLPLQIRVVAVMAMSLICFPLLNVNAPNIPDDTISLALLALREV
MIGITLSFVTQIIFSAVEFSGQIIGMQMGFTMAAIMDPTHGTQSQVMSVMQSLLATLMFLCMSIHHLFIRAIVDSFHIIP
LGVWHLNGEIITFLTRATADVFVLGVRLAAPVMVALLLTSVTLGIMARSFPQMNVFMISFPLNIGIGFIILGATLPMFFH
VLEVSFGSVKEQIDTIFRLMAKGG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1684

COG function: function code NU; Flagellar biosynthesis pathway, component FliR

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

Organism=Escherichia coli, GI1788261, Length=228, Percent_Identity=31.140350877193, Blast_Score=104, Evalue=7e-24,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006303
- InterPro:   IPR002010 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28862; Mature: 28862

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
7.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLLPFPSQREIILFALVLGRMAGMFSALPVFGGKRLPLQIRVVAVMAMSLICFPLLNV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
NAPNIPDDTISLALLALREVMIGITLSFVTQIIFSAVEFSGQIIGMQMGFTMAAIMDPTH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCC
GTQSQVMSVMQSLLATLMFLCMSIHHLFIRAIVDSFHIIPLGVWHLNGEIITFLTRATAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHH
VFVLGVRLAAPVMVALLLTSVTLGIMARSFPQMNVFMISFPLNIGIGFIILGATLPMFFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
VLEVSFGSVKEQIDTIFRLMAKGG
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFPLLPFPSQREIILFALVLGRMAGMFSALPVFGGKRLPLQIRVVAVMAMSLICFPLLNV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
NAPNIPDDTISLALLALREVMIGITLSFVTQIIFSAVEFSGQIIGMQMGFTMAAIMDPTH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCC
GTQSQVMSVMQSLLATLMFLCMSIHHLFIRAIVDSFHIIPLGVWHLNGEIITFLTRATAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHHHH
VFVLGVRLAAPVMVALLLTSVTLGIMARSFPQMNVFMISFPLNIGIGFIILGATLPMFFH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH
VLEVSFGSVKEQIDTIFRLMAKGG
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8299954; 9384377 [H]