| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is mtaD [H]
Identifier: 118581809
GI number: 118581809
Start: 3763808
End: 3765094
Strand: Direct
Name: mtaD [H]
Synonym: Ppro_3409
Alternate gene names: 118581809
Gene position: 3763808-3765094 (Clockwise)
Preceding gene: 118581807
Following gene: 118581814
Centisome position: 93.91
GC content: 68.22
Gene sequence:
>1287_bases ATGACATCCTTCCCCATGGATAACGACTCCTTCATCGTGGCAGCCTCGTGGCTGCTCTCTCCCGAAGCGCCTCCCCTGGC CGGTGGCGCGCTGCTGGTGCGTCGCGGCCGTATCGGGGACCTGGGCACCCTGCAGCGGTTGCGGCGCGATCACCCCGTTC CGATCATCGACCATCCCGGCTGCGCCATCCTGCCCGGCTTCATCAATGCCCACACCCACCTGGAGTTGACCCATTTCCCC AGCTGGCGCTTGCGCAGCCAGCTGGAGGAGCACCCGCAGCGCTTCGTGGACTGGATCATCCAGCTGATCAAGGTCAAGCG CGGCCTGACCCCCGACGACATGCGTGCCTCGGCCCGGGAGGGGATCCGCATGTGCCTGGAGTCAGGAACCACCGCGGTGG GGGAGATCGTCACGGCTCGCACGCTGGCGCCGCTGTACCGCGGATCCCGGCTCTCCGGCCGGCTGTTCTTCGAACTGGTG GGACACGACAACTCCCGCTTCCGGGAATTGCTTCGGGAGGCGGTGGAGCTTAGCGGGGAATCTCCGGCCGGGTCGTTCAG CGCGGGGCTCTCGCCCCATGCCCCCTACACCCTGGGGGAGGAGACCTTTCCGCTGATCCGGGAGGCGGCTGCGGGCGCAT CCCTGCCGCTGGCCATCCACTGCTCCGAATCAACGGAGGAGACCAATTTCGTCTTCAGCAGCAGCGGCCAACTGGCCGAG AGATTCTACCCCTTCGTGGGGTGGGAGCGCTACCTGCCCCCGCCACGCAGATGCAGCACCAGCCAGCTTCTGGAGCGGGC CGGCCTGCTGACCGATTCCACCCTGGCCATCCACTGCGTACAGGTCAGCCGCGCGGATGCCGAGATCCTGAGGAAGCGCG GCGTCAGCGTGGCCCTCTGCCCGCGCAGCAACGAGCGCCTGGACGTGGGGCGGGCACCGGTGGCGCTGCTGCGCAAGCTG GGGATTCCCCTTGCCCTGGGCACCGACTCCCTGGCCAGCAACGACTCCCTCTCCCTCTGGGACGAGCTGCGCTTCGCCCT GGATGCCTTCGGGGACGAGCTGTCGCCGGCCGACCTCTTCCGCATGGTCACCCTGGGGGGCGCCACCGCCCTGGGGATCC AGGGGGACCACGGCTCTCTGGAGAAAGGGAAGCGGGCCGACTTCCAGATTGTGGGGCAGGCGGGAAAACGGGAGAGCGGG CTTGTGGAGCGGGTCATGCTGCGGGGAGTCGTGGAGGATGTGTATGTGGCCGGAGAGCGGTTCGACGGGGAGCGGACATC GCCCTGA
Upstream 100 bases:
>100_bases TGCGTTAAGTCCGACAGACTCCTAGTGGCCGGTTCCTGCCGCGCTTCCAGGCTATGCCCCGGCCCATTCCATCCGCCGCC ATGGCATCTGCGAGGAAACA
Downstream 100 bases:
>100_bases GACAACGGTCGCCAGCCCCGCCAACGAGCCTTCCGCCGCGTCCTGCTACGGCTGTTCCTTCTCCGCTTCCTTCCCGGCCA TGGCCGGCAGGTAGAGGCTG
Product: amidohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTSFPMDNDSFIVAASWLLSPEAPPLAGGALLVRRGRIGDLGTLQRLRRDHPVPIIDHPGCAILPGFINAHTHLELTHFP SWRLRSQLEEHPQRFVDWIIQLIKVKRGLTPDDMRASAREGIRMCLESGTTAVGEIVTARTLAPLYRGSRLSGRLFFELV GHDNSRFRELLREAVELSGESPAGSFSAGLSPHAPYTLGEETFPLIREAAAGASLPLAIHCSESTEETNFVFSSSGQLAE RFYPFVGWERYLPPPRRCSTSQLLERAGLLTDSTLAIHCVQVSRADAEILRKRGVSVALCPRSNERLDVGRAPVALLRKL GIPLALGTDSLASNDSLSLWDELRFALDAFGDELSPADLFRMVTLGGATALGIQGDHGSLEKGKRADFQIVGQAGKRESG LVERVMLRGVVEDVYVAGERFDGERTSP
Sequences:
>Translated_428_residues MTSFPMDNDSFIVAASWLLSPEAPPLAGGALLVRRGRIGDLGTLQRLRRDHPVPIIDHPGCAILPGFINAHTHLELTHFP SWRLRSQLEEHPQRFVDWIIQLIKVKRGLTPDDMRASAREGIRMCLESGTTAVGEIVTARTLAPLYRGSRLSGRLFFELV GHDNSRFRELLREAVELSGESPAGSFSAGLSPHAPYTLGEETFPLIREAAAGASLPLAIHCSESTEETNFVFSSSGQLAE RFYPFVGWERYLPPPRRCSTSQLLERAGLLTDSTLAIHCVQVSRADAEILRKRGVSVALCPRSNERLDVGRAPVALLRKL GIPLALGTDSLASNDSLSLWDELRFALDAFGDELSPADLFRMVTLGGATALGIQGDHGSLEKGKRADFQIVGQAGKRESG LVERVMLRGVVEDVYVAGERFDGERTSP >Mature_427_residues TSFPMDNDSFIVAASWLLSPEAPPLAGGALLVRRGRIGDLGTLQRLRRDHPVPIIDHPGCAILPGFINAHTHLELTHFPS WRLRSQLEEHPQRFVDWIIQLIKVKRGLTPDDMRASAREGIRMCLESGTTAVGEIVTARTLAPLYRGSRLSGRLFFELVG HDNSRFRELLREAVELSGESPAGSFSAGLSPHAPYTLGEETFPLIREAAAGASLPLAIHCSESTEETNFVFSSSGQLAER FYPFVGWERYLPPPRRCSTSQLLERAGLLTDSTLAIHCVQVSRADAEILRKRGVSVALCPRSNERLDVGRAPVALLRKLG IPLALGTDSLASNDSLSLWDELRFALDAFGDELSPADLFRMVTLGGATALGIQGDHGSLEKGKRADFQIVGQAGKRESGL VERVMLRGVVEDVYVAGERFDGERTSP
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=197, Percent_Identity=27.9187817258883, Blast_Score=74, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319963, Length=354, Percent_Identity=22.5988700564972, Blast_Score=70, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 46809; Mature: 46678
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFPMDNDSFIVAASWLLSPEAPPLAGGALLVRRGRIGDLGTLQRLRRDHPVPIIDHPG CCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCC CAILPGFINAHTHLELTHFPSWRLRSQLEEHPQRFVDWIIQLIKVKRGLTPDDMRASARE CEEECHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GIRMCLESGTTAVGEIVTARTLAPLYRGSRLSGRLFFELVGHDNSRFRELLREAVELSGE HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC SPAGSFSAGLSPHAPYTLGEETFPLIREAAAGASLPLAIHCSESTEETNFVFSSSGQLAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCHHHH RFYPFVGWERYLPPPRRCSTSQLLERAGLLTDSTLAIHCVQVSRADAEILRKRGVSVALC HHCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEC PRSNERLDVGRAPVALLRKLGIPLALGTDSLASNDSLSLWDELRFALDAFGDELSPADLF CCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH RMVTLGGATALGIQGDHGSLEKGKRADFQIVGQAGKRESGLVERVMLRGVVEDVYVAGER HHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC FDGERTSP CCCCCCCC >Mature Secondary Structure TSFPMDNDSFIVAASWLLSPEAPPLAGGALLVRRGRIGDLGTLQRLRRDHPVPIIDHPG CCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCC CAILPGFINAHTHLELTHFPSWRLRSQLEEHPQRFVDWIIQLIKVKRGLTPDDMRASARE CEEECHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GIRMCLESGTTAVGEIVTARTLAPLYRGSRLSGRLFFELVGHDNSRFRELLREAVELSGE HHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCC SPAGSFSAGLSPHAPYTLGEETFPLIREAAAGASLPLAIHCSESTEETNFVFSSSGQLAE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEECCCHHHH RFYPFVGWERYLPPPRRCSTSQLLERAGLLTDSTLAIHCVQVSRADAEILRKRGVSVALC HHCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCEEEEC PRSNERLDVGRAPVALLRKLGIPLALGTDSLASNDSLSLWDELRFALDAFGDELSPADLF CCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHH RMVTLGGATALGIQGDHGSLEKGKRADFQIVGQAGKRESGLVERVMLRGVVEDVYVAGER HHHHHCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC FDGERTSP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]