| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581800
Identifier: 118581800
GI number: 118581800
Start: 3751285
End: 3752151
Strand: Reverse
Name: 118581800
Synonym: Ppro_3400
Alternate gene names: NA
Gene position: 3752151-3751285 (Counterclockwise)
Preceding gene: 118581801
Following gene: 118581799
Centisome position: 93.62
GC content: 33.22
Gene sequence:
>867_bases GTGCTTCAGATGGTAAAATACTATAATAGACTAGGTGTAAAAGTACATATCAATAATCCATTCATAAAATATGATGTATC TATAGTATACCGTTTACCATCCAAGCAATTTTACTTACTAATAAAATATTTAAGGAACAGATCATCTATGATCTATTTTG ATGCTGTAGTTAATTATTTTGAGAAGCATAACCACGCTACAGACAAACACATATATTATCAGAGAAAAATTGCAGATAAC TGTGATGGTATTATTTGTGCTACAGACAATATTGCTGCAAGCGCCCGTAAATTCAACGGTAATATTTTTGTCATGGATGA TCCTGTCGATACTGAATATTTTGACATCATAAAACATACTCTGAATTACTGTAATCCAATTTTTGGCTGGTCTGGCGTGT CTTCTAAGGCACTTGAACTTAATAAATATGCAGATATTATTAATAATAGAATAAATATAATTAGTGACAAGCGCGCGCTA TCTATTGATTTTTGTTTTAATTTTAGTTTTTATGAATGGCGGTATGAAACTTTCAAGAACAATATACTCCGCTGCGACAT AGCCTTATTACCTCGCAGTATTATCGGAGATCATTATAATAATGGCCATAGCTCATTTAAGGCGTTGGTTTTTGCTGTGA GCGGAATACCTATTATAGCAAATAGGATACCTTCATATGAAAAGTTAAAAGATTATTTTAATGGTGTAGTATTTATCGAA GATTATGGTGGCGATATAAAGTTATGTATGGAAGCCTTAGCAGGTAGTGGACCAATAAACGCTCATCCTGCAAGAGCCAA ATACAGTTGCGAAAATCAAGCGAAGGCCCTTATGTCATTTATACATGGAAGCTCAGGTTATGTGTAA
Upstream 100 bases:
>100_bases CTATGTTCATTACATATGGTGAATAGTCTTGCGATTAGGCTTGTTTGTTCCAACATTGACAAGAGATTACAATGCGGTGC CCGCATCTGTCTGGATTCGC
Downstream 100 bases:
>100_bases GGTACATATTCTATGTGAATTGGTTGATGGTCCATATGGAGGATCTCATCAATTTTTAAAAGCATTGCGAGACGGATTAC GCAGTAAAGGCGTTTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MLQMVKYYNRLGVKVHINNPFIKYDVSIVYRLPSKQFYLLIKYLRNRSSMIYFDAVVNYFEKHNHATDKHIYYQRKIADN CDGIICATDNIAASARKFNGNIFVMDDPVDTEYFDIIKHTLNYCNPIFGWSGVSSKALELNKYADIINNRINIISDKRAL SIDFCFNFSFYEWRYETFKNNILRCDIALLPRSIIGDHYNNGHSSFKALVFAVSGIPIIANRIPSYEKLKDYFNGVVFIE DYGGDIKLCMEALAGSGPINAHPARAKYSCENQAKALMSFIHGSSGYV
Sequences:
>Translated_288_residues MLQMVKYYNRLGVKVHINNPFIKYDVSIVYRLPSKQFYLLIKYLRNRSSMIYFDAVVNYFEKHNHATDKHIYYQRKIADN CDGIICATDNIAASARKFNGNIFVMDDPVDTEYFDIIKHTLNYCNPIFGWSGVSSKALELNKYADIINNRINIISDKRAL SIDFCFNFSFYEWRYETFKNNILRCDIALLPRSIIGDHYNNGHSSFKALVFAVSGIPIIANRIPSYEKLKDYFNGVVFIE DYGGDIKLCMEALAGSGPINAHPARAKYSCENQAKALMSFIHGSSGYV >Mature_288_residues MLQMVKYYNRLGVKVHINNPFIKYDVSIVYRLPSKQFYLLIKYLRNRSSMIYFDAVVNYFEKHNHATDKHIYYQRKIADN CDGIICATDNIAASARKFNGNIFVMDDPVDTEYFDIIKHTLNYCNPIFGWSGVSSKALELNKYADIINNRINIISDKRAL SIDFCFNFSFYEWRYETFKNNILRCDIALLPRSIIGDHYNNGHSSFKALVFAVSGIPIIANRIPSYEKLKDYFNGVVFIE DYGGDIKLCMEALAGSGPINAHPARAKYSCENQAKALMSFIHGSSGYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33104; Mature: 33104
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQMVKYYNRLGVKVHINNPFIKYDVSIVYRLPSKQFYLLIKYLRNRSSMIYFDAVVNYF CCHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHH EKHNHATDKHIYYQRKIADNCDGIICATDNIAASARKFNGNIFVMDDPVDTEYFDIIKHT HHCCCCCCCCEEEEEHHCCCCCEEEEECCCHHHHHEEECCEEEEEECCCCHHHHHHHHHH LNYCNPIFGWSGVSSKALELNKYADIINNRINIISDKRALSIDFCFNFSFYEWRYETFKN HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEECCHHEEEHHHHHC NILRCDIALLPRSIIGDHYNNGHSSFKALVFAVSGIPIIANRIPSYEKLKDYFNGVVFIE CEEEEEHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCEEEEE DYGGDIKLCMEALAGSGPINAHPARAKYSCENQAKALMSFIHGSSGYV ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLQMVKYYNRLGVKVHINNPFIKYDVSIVYRLPSKQFYLLIKYLRNRSSMIYFDAVVNYF CCHHHHHHHHCCEEEEECCCEEEEEEEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHH EKHNHATDKHIYYQRKIADNCDGIICATDNIAASARKFNGNIFVMDDPVDTEYFDIIKHT HHCCCCCCCCEEEEEHHCCCCCEEEEECCCHHHHHEEECCEEEEEECCCCHHHHHHHHHH LNYCNPIFGWSGVSSKALELNKYADIINNRINIISDKRALSIDFCFNFSFYEWRYETFKN HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEECCHHEEEHHHHHC NILRCDIALLPRSIIGDHYNNGHSSFKALVFAVSGIPIIANRIPSYEKLKDYFNGVVFIE CEEEEEHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHCCEEEEE DYGGDIKLCMEALAGSGPINAHPARAKYSCENQAKALMSFIHGSSGYV ECCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA