Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is epsE [H]

Identifier: 118581793

GI number: 118581793

Start: 3744631

End: 3745557

Strand: Reverse

Name: epsE [H]

Synonym: Ppro_3393

Alternate gene names: 118581793

Gene position: 3745557-3744631 (Counterclockwise)

Preceding gene: 118581794

Following gene: 118581792

Centisome position: 93.45

GC content: 47.36

Gene sequence:

>927_bases
ATGAAGATCAGCGTAATAATGTCTGCCTACAACGCAGAAAAGCACCTGACGAAATCCATTGAGTCGGTGCTGGGGCAGAC
CTACAGCGACTTTGAATTCCTCATTGTCAATGACGCATCGACCGATGACACTCCGGCCCTTTTGCAGAAATACCAGAGAT
CGGATAATCGCATCGCACTACTGCATAACCGGTCAAACATTGGATTGACGCGTTCACTGAATCTTGCCATACAGCATGCA
CGGCATAACATCATAGCTCGACAGGACGCTGATGATATTTCTCATCCTGAGCGGTTTTCCAAGCAAATTGACTTCTTGAA
GACACATGGCGAAGTAATGCTACTTGGGACCGCAGGGCAGTTAATTGATGATTCGGGCCGGATTCTAAGGAATGAACCGG
TGATATCCGGAAGTGTGCGACTCAAGAAGCGTCTGCAGAGATGTAACCAGTTTATCCACGGGTCAGTAATGATGCGGCGG
CAATGCCTCAACGTCATTGGCCTTTATAGAGAGGAATTTGTAAGCGCCCAAGACTACGACCTCTTTCTACGGATTTCAGA
ACAGTACGCGGTAGACAATCTTCCTGTTCCTCTCTATCAGTATCGGATCAGCCCTTCAACAGTCTCCATAGCCAAAAGCA
GGCAGCAGCAGGTTTGTGCTCTGATTGCCCAGGAGGCCTCAAGGGACCGGCGCTCCGGCATGCCAAACAACTGGGACCAG
CTCATGTACGATGCCTATAGTCGTAGAATCAATTCAAAGCGTTTTCATAAAACGATTGAATGCAATCTCGCATTAACAAA
GGGAAGAAACAGTTTACTCGCTGGCGAGCATTTAACGGCAAAAAAAGAATTCAGCAAAGCTTTTGTGGTCAGACCGTCTC
TAAAAACACTCTACCATTTAGTCCGTAGTTATGTCTGCTGCCGATAA

Upstream 100 bases:

>100_bases
TCACCAATGAAACAGTAAGCTGCCTGATTTTTGCCAGTCTAATTTGCTGGAAACATCTGCTGCCTGACTCAGTTCAGCAG
CCACTGGATACTACAAGAGC

Downstream 100 bases:

>100_bases
CCCAAAAGCAAGCATCATAATTTGTACAGTTGACAGGCCCCAGCAACTGGCAGCTTGTGTCGCGGCATTACTGCAACAGC
AGGGCGCATTTGAAATAATT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIALLHNRSNIGLTRSLNLAIQHA
RHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQLIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRR
QCLNVIGLYREEFVSAQDYDLFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ
LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHLVRSYVCCR

Sequences:

>Translated_308_residues
MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIALLHNRSNIGLTRSLNLAIQHA
RHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQLIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRR
QCLNVIGLYREEFVSAQDYDLFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ
LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHLVRSYVCCR
>Mature_308_residues
MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIALLHNRSNIGLTRSLNLAIQHA
RHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQLIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRR
QCLNVIGLYREEFVSAQDYDLFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ
LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHLVRSYVCCR

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35336; Mature: 35336

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIAL
CEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEE
LHNRSNIGLTRSLNLAIQHARHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQ
EECCCCCCEEEHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
LIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRRQCLNVIGLYREEFVSAQDYD
EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ
EEEEEECHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHL
HHHHHHHHHCCHHHHHEEEEEEEEEECCCCCEECCCCHHHHHHHHHHEEECCCHHHHHHH
VRSYVCCR
HHHHHCCC
>Mature Secondary Structure
MKISVIMSAYNAEKHLTKSIESVLGQTYSDFEFLIVNDASTDDTPALLQKYQRSDNRIAL
CEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCEEEE
LHNRSNIGLTRSLNLAIQHARHNIIARQDADDISHPERFSKQIDFLKTHGEVMLLGTAGQ
EECCCCCCEEEHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
LIDDSGRILRNEPVISGSVRLKKRLQRCNQFIHGSVMMRRQCLNVIGLYREEFVSAQDYD
EECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LFLRISEQYAVDNLPVPLYQYRISPSTVSIAKSRQQQVCALIAQEASRDRRSGMPNNWDQ
EEEEEECHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LMYDAYSRRINSKRFHKTIECNLALTKGRNSLLAGEHLTAKKEFSKAFVVRPSLKTLYHL
HHHHHHHHHCCHHHHHEEEEEEEEEECCCCCEECCCCHHHHHHHHHHEEECCCHHHHHHH
VRSYVCCR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]