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The map label for this gene is pgaC [H]

Identifier: 118581789

GI number: 118581789

Start: 3739971

End: 3741107

Strand: Reverse

Name: pgaC [H]

Synonym: Ppro_3389

Alternate gene names: 118581789

Gene position: 3741107-3739971 (Counterclockwise)

Preceding gene: 118581790

Following gene: 118581788

Centisome position: 93.34

GC content: 37.55

Gene sequence:

>1137_bases
GTGACGGCTGCGTTAGATACCCTGATAGTTGGGTGCGTGTTTCTGATTATTTATACGTACCTGTTATTTCCGCTCGCTAT
TTACTGCCTGTCTAAAATATTGCATAAAGAGCAAATACTTATGCCACAAATTTGCAACAAGCCATCGGTTGCAATAATTT
GTGCAATGTATAATGAAGAGGATGTGGCCGAAGCAAAGATAACTAATTTCAAAGCTATTGCCTATAAAAACATCAAAATG
TACATCGGTTCCGACGGGTCTTCCGACAGAACAAATGAAATATTGGCAGATCATGAAGACAATGTCTCATTGAGAACTTT
TACATATCCAAGAAGAGGTAAGGTTCATGTCATTAATGACCTAATTGCACAGACAACCGAGGAAATTATAGTGTTCACTG
ATGCTAACTCAATGTTAGAGTCTGAAGCAGTTGAACGACTTATTTATCATTTCTACGACAAATCAGTTGGAGCAGTATGT
GGTCGTTTACACCTTGTTGACAAAAATGGTAAGTCGGGAGAAGGCTTTTACTGGCGCTTTGAAACAATGCTCAAACGTGC
AGAAGGTATATTCAAATGCGTAGTTGGAGGTAATGGAGCAATTTATGCTGTTAGACGCGAATTGGTAAATCAGCTTCCAG
CGGACACAATAAATGACGATTTTACTATCTCAATGTCAGTTTTACTGCAGGGATACGGTATCGCCTACGCGGAAGACGCC
ATTGCAACAGAAGAGGTGGGAAAAAATGATTCCATTGAGTTTATTCGCCATATCAGGGATGCGGCAGGACATTACCGTGC
TATACGACATTTGCTGCCTCTGTTGAATCCATGTCATCCAAAACGTTTCTTTTTTTACGTCTCACACAGAGTCATCCGCT
GGTTCGTACCATTTCTTTTACTACTGTTACTTTTTATCCCAATTTTTGTCTGGCACACATTTATCGCGAAAGTAATATTT
TGTTTTGAACTTTTGCTATATTTTCTTGCGTTTATAGAAATAGTAACAAAATCAAAAAACAAGTTGTTTTATATACCATA
TTATTTCTTATACATAAATATTGCCATGTTGATAGGCTTTTTCAAAAATATGTTTGGAATTCAGAATGTAACGTGGGAAA
GAACACAAAGAATTTGA

Upstream 100 bases:

>100_bases
TTACAAAGGCAATAGACCTTGTGAAAAATCCTTCTGAAATCAAACGCACAGTCAAAGCAGGCAGTATATTAATAAAACAT
TTACTCAAAGGTAAAGAAGA

Downstream 100 bases:

>100_bases
TTTGTTATACCATAAATTTGGCGCAACAATATAGACTCGTGGCAATAATGGCTAAGTATGAAACGTCTGCTCGATTTTTG
CATATCACTATTTGCTATGT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: PGA synthase; Poly-beta-1,6-GlcNAc synthase; Biofilm PGA synthesis protein PgaC; N-acetylglucosaminyltransferase PgaC [H]

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTAALDTLIVGCVFLIIYTYLLFPLAIYCLSKILHKEQILMPQICNKPSVAIICAMYNEEDVAEAKITNFKAIAYKNIKM
YIGSDGSSDRTNEILADHEDNVSLRTFTYPRRGKVHVINDLIAQTTEEIIVFTDANSMLESEAVERLIYHFYDKSVGAVC
GRLHLVDKNGKSGEGFYWRFETMLKRAEGIFKCVVGGNGAIYAVRRELVNQLPADTINDDFTISMSVLLQGYGIAYAEDA
IATEEVGKNDSIEFIRHIRDAAGHYRAIRHLLPLLNPCHPKRFFFYVSHRVIRWFVPFLLLLLLFIPIFVWHTFIAKVIF
CFELLLYFLAFIEIVTKSKNKLFYIPYYFLYINIAMLIGFFKNMFGIQNVTWERTQRI

Sequences:

>Translated_378_residues
MTAALDTLIVGCVFLIIYTYLLFPLAIYCLSKILHKEQILMPQICNKPSVAIICAMYNEEDVAEAKITNFKAIAYKNIKM
YIGSDGSSDRTNEILADHEDNVSLRTFTYPRRGKVHVINDLIAQTTEEIIVFTDANSMLESEAVERLIYHFYDKSVGAVC
GRLHLVDKNGKSGEGFYWRFETMLKRAEGIFKCVVGGNGAIYAVRRELVNQLPADTINDDFTISMSVLLQGYGIAYAEDA
IATEEVGKNDSIEFIRHIRDAAGHYRAIRHLLPLLNPCHPKRFFFYVSHRVIRWFVPFLLLLLLFIPIFVWHTFIAKVIF
CFELLLYFLAFIEIVTKSKNKLFYIPYYFLYINIAMLIGFFKNMFGIQNVTWERTQRI
>Mature_377_residues
TAALDTLIVGCVFLIIYTYLLFPLAIYCLSKILHKEQILMPQICNKPSVAIICAMYNEEDVAEAKITNFKAIAYKNIKMY
IGSDGSSDRTNEILADHEDNVSLRTFTYPRRGKVHVINDLIAQTTEEIIVFTDANSMLESEAVERLIYHFYDKSVGAVCG
RLHLVDKNGKSGEGFYWRFETMLKRAEGIFKCVVGGNGAIYAVRRELVNQLPADTINDDFTISMSVLLQGYGIAYAEDAI
ATEEVGKNDSIEFIRHIRDAAGHYRAIRHLLPLLNPCHPKRFFFYVSHRVIRWFVPFLLLLLLFIPIFVWHTFIAKVIFC
FELLLYFLAFIEIVTKSKNKLFYIPYYFLYINIAMLIGFFKNMFGIQNVTWERTQRI

Specific function: Probable N-acetylglucosaminyltransferase that catalyzes the polymerization of single monomer units of UDP-N- acetylglucosamine to produce the linear homopolymer poly-beta-1,6- N-acetyl-D-glucosamine (PGA), a biofilm adhesin polysaccharide [H]

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=242, Percent_Identity=27.6859504132231, Blast_Score=79, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 43626; Mature: 43494

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAALDTLIVGCVFLIIYTYLLFPLAIYCLSKILHKEQILMPQICNKPSVAIICAMYNEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
DVAEAKITNFKAIAYKNIKMYIGSDGSSDRTNEILADHEDNVSLRTFTYPRRGKVHVIND
HHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHH
LIAQTTEEIIVFTDANSMLESEAVERLIYHFYDKSVGAVCGRLHLVDKNGKSGEGFYWRF
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEHH
ETMLKRAEGIFKCVVGGNGAIYAVRRELVNQLPADTINDDFTISMSVLLQGYGIAYAEDA
HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCHHHHH
IATEEVGKNDSIEFIRHIRDAAGHYRAIRHLLPLLNPCHPKRFFFYVSHRVIRWFVPFLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LLLLFIPIFVWHTFIAKVIFCFELLLYFLAFIEIVTKSKNKLFYIPYYFLYINIAMLIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
FKNMFGIQNVTWERTQRI
HHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
TAALDTLIVGCVFLIIYTYLLFPLAIYCLSKILHKEQILMPQICNKPSVAIICAMYNEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
DVAEAKITNFKAIAYKNIKMYIGSDGSSDRTNEILADHEDNVSLRTFTYPRRGKVHVIND
HHHHHHHCCCCEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHHHHH
LIAQTTEEIIVFTDANSMLESEAVERLIYHFYDKSVGAVCGRLHLVDKNGKSGEGFYWRF
HHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEHH
ETMLKRAEGIFKCVVGGNGAIYAVRRELVNQLPADTINDDFTISMSVLLQGYGIAYAEDA
HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHCCCCHHHHH
IATEEVGKNDSIEFIRHIRDAAGHYRAIRHLLPLLNPCHPKRFFFYVSHRVIRWFVPFLL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LLLLFIPIFVWHTFIAKVIFCFELLLYFLAFIEIVTKSKNKLFYIPYYFLYINIAMLIGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHH
FKNMFGIQNVTWERTQRI
HHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]