| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581740
Identifier: 118581740
GI number: 118581740
Start: 3686035
End: 3688215
Strand: Reverse
Name: 118581740
Synonym: Ppro_3340
Alternate gene names: NA
Gene position: 3688215-3686035 (Counterclockwise)
Preceding gene: 118581741
Following gene: 118581739
Centisome position: 92.02
GC content: 43.24
Gene sequence:
>2181_bases GTGGCGAATTCAACGAGTTATGTGAACAACAATAAGATACGTAGGCTTGTCGAACAGCTTGCTGTTGCCGGATACGACCG TAAAAATATTGTCATTTACGGGATCGGTGCTGTGGCGAAATCGATTGCTTCTCAACTGACGGAGGCAAACATCGTAGGGC TCATGGACAAGGATCCGGGTAACATTGGAAGGTGTATTTATGGTTACGAGGTGCTGTCAACCGAGGTGGCGATTTCAAAG GCTGATGCAATTGTTATAGCGGCGAGCGAGGTTTACTGGGATACCATTTTTAGAAGGATTTCTTTCATGAAATCCGATTA CGGCAAGCAAATTTTTTTTACAAATGGTGATATTGCTGACTTTGTGTTGGCAGAGCGTGAGACCCAGATGCATCCATACT GGGATACCACCCATGACGTAATCTTGTCAGAAATCGAACACCATGAAGTCATCTCGTTCGATGTCTTCGATACATTGATT TGTAGAAAAATATCACGACCAGAAGATATCTACTCAATTGTCGAAGAGCGAGCGAATATGGATGTGCTCTTAGAAGAGAA CTTTTTCCAGATCCGGATGGAAGCGGTCGATTTGTTTCAAAAATCAGGGGATCCTGTCTTCTCTATTCACGAACTTTACG CTTTTATGACAGCCCATTTCGGTATCGCTAAGGAGCGTGCCGAAAGGCTGAAACAATTGGAAATTGATGTGGAGATTGAG TTCTCGGAACCCAGAAACGAGGTGATAGCTCTGTATCACCTTGCTAACCGTTTGAACAAGCGAGTTTATCTGATCAGCGA TTATCATATGCCGTCAGATATTCTTAAGCGTATCTTTTTCAAATCCGGTATAGCTCTTCCCACAGGATTGCTTGTATCCT GTGAAGTGAAAAAGTCAAAGTTAAGTGGTGCGTTGTGGGAATATTATAGGAACCTTATAGGCAACGGCAAAGCCTTGCAT ATTGGTGATAACGATATTGCCGACATATCAAATCCTGTTCTTCATGGTATCCAACCATGTAAGATCATGAGCTGCAATGA CATGCTTTTTGCGTCTTCCCTCAGACAAATAGGGATTCTCGTTCGTGGGCTACAGGACAGTAAGATTGTGGGCTTGATAC AACATCACCTCTTTAACAGTCCGTTTTCTCTCGGCGCAAATAAAGGGTATCCTGAGATTGTCACCTTGAAAACGTTTGGT TATGTTTTTTTGGGTCCGCTGATATACAATTATTTTTCATGGCTTATTCCAGAACTTGCGAGTGGGGTTTACAATAAGGT TTTGTTTCTTGCAAGAGAGGGATACCTACTGAAACGAATTTACGACAAGTTGACCGATTCGCTAGGCCTGACCGGCCATC CGGAAGGAGTGTATTTCAGAACATCACGTCGCATGGCATCGGTCGCTTCCATAATGAGCGAAGATGATATTTTCGCCACA TTGAACGACAGTTTTTCCGGCACAGCAAGGGAGTTCCTGGAGAATAGGTTTGGAATAGATGGTACAAACGAAGATTCGAG TGAGATACTCGTACAGACTGACTCAAAGATTGTATTCTTGGTTCGTAAGTATTCCGACATCATTTTGCGTAATGCCGCAG TTGAACGTTCCAACTATTTAAATTACATGAATAGATCCGGAGTCATCACAAGTAGAAGTATGGCTGTTGCCGACATAGGT ATCAAAGGTTCCATTCAGTACTATCTTGGCAAGATAATAGAATCTGAACTGGTCGGCTATTACATGACCGCACTTACTGG CCCTGACAACCCTTATTGCCTTGGAAAAAACATCAAGGCGCTTTACCCAGAGCCCCTATTTGACAAACGTAAATCAAGCA ATGTCTTCAAATATCACCTTATGCTCGAATCGACTCTCGTGGCCCCTGAGGGGATGTACATCAGGGCTAACGAAGATGGT ACTTTCGTACATGGCCCACACTTTTATAACCAGCTACACTTTGAATATAAAGCCGAAATACACGCAGGCATAGAGGCTTT CGTTTTCGACATGCTTGCCAGTAACGGATACAGGCTAGGTAAGCCTGCCTCCCCCGATCTTGTTGACGAGCTTTTTGGGC TTCCCATGAGTGGAACGTGTCTGATTTCCGATGAAATTAAGAATTCATTCCATATCGACGAACTTTTCGGAGTAGTTAAT GAAAAAAAGATTTGGGAATAA
Upstream 100 bases:
>100_bases AGCTGAAGTGTTTGAGAGCTAAATACGGCTACTAAGTAGGAATATCAAGCTGCTTTTCGTAATTATAGTTCAGGATTAAC CCAGAACAGAGTGTGATGAC
Downstream 100 bases:
>100_bases TAGGTTGTTTTTCTGTATGTTTCTGACGGTCAGCAAAGTTGCAGGATTCCTTTATCCTGTTAAGCCAGAGGTCGGCAATA ATGAACGTTGAGCGAATACT
Product: HAD superfamily hydrolase-like protein
Products: NA
Alternate protein names: Glycosyl Transferase; Hydrolase Protein; Hydrolase-Like Protein; Hydrolase Protein-Like Protein; Sugar Transferase; Haloacid Dehalogenase Domain Protein Hydrolase; Capsule Polysaccharide Biosynthesis Protein; Glycosyl Transferase Family Protein; Glycosyltransferase
Number of amino acids: Translated: 726; Mature: 725
Protein sequence:
>726_residues MANSTSYVNNNKIRRLVEQLAVAGYDRKNIVIYGIGAVAKSIASQLTEANIVGLMDKDPGNIGRCIYGYEVLSTEVAISK ADAIVIAASEVYWDTIFRRISFMKSDYGKQIFFTNGDIADFVLAERETQMHPYWDTTHDVILSEIEHHEVISFDVFDTLI CRKISRPEDIYSIVEERANMDVLLEENFFQIRMEAVDLFQKSGDPVFSIHELYAFMTAHFGIAKERAERLKQLEIDVEIE FSEPRNEVIALYHLANRLNKRVYLISDYHMPSDILKRIFFKSGIALPTGLLVSCEVKKSKLSGALWEYYRNLIGNGKALH IGDNDIADISNPVLHGIQPCKIMSCNDMLFASSLRQIGILVRGLQDSKIVGLIQHHLFNSPFSLGANKGYPEIVTLKTFG YVFLGPLIYNYFSWLIPELASGVYNKVLFLAREGYLLKRIYDKLTDSLGLTGHPEGVYFRTSRRMASVASIMSEDDIFAT LNDSFSGTAREFLENRFGIDGTNEDSSEILVQTDSKIVFLVRKYSDIILRNAAVERSNYLNYMNRSGVITSRSMAVADIG IKGSIQYYLGKIIESELVGYYMTALTGPDNPYCLGKNIKALYPEPLFDKRKSSNVFKYHLMLESTLVAPEGMYIRANEDG TFVHGPHFYNQLHFEYKAEIHAGIEAFVFDMLASNGYRLGKPASPDLVDELFGLPMSGTCLISDEIKNSFHIDELFGVVN EKKIWE
Sequences:
>Translated_726_residues MANSTSYVNNNKIRRLVEQLAVAGYDRKNIVIYGIGAVAKSIASQLTEANIVGLMDKDPGNIGRCIYGYEVLSTEVAISK ADAIVIAASEVYWDTIFRRISFMKSDYGKQIFFTNGDIADFVLAERETQMHPYWDTTHDVILSEIEHHEVISFDVFDTLI CRKISRPEDIYSIVEERANMDVLLEENFFQIRMEAVDLFQKSGDPVFSIHELYAFMTAHFGIAKERAERLKQLEIDVEIE FSEPRNEVIALYHLANRLNKRVYLISDYHMPSDILKRIFFKSGIALPTGLLVSCEVKKSKLSGALWEYYRNLIGNGKALH IGDNDIADISNPVLHGIQPCKIMSCNDMLFASSLRQIGILVRGLQDSKIVGLIQHHLFNSPFSLGANKGYPEIVTLKTFG YVFLGPLIYNYFSWLIPELASGVYNKVLFLAREGYLLKRIYDKLTDSLGLTGHPEGVYFRTSRRMASVASIMSEDDIFAT LNDSFSGTAREFLENRFGIDGTNEDSSEILVQTDSKIVFLVRKYSDIILRNAAVERSNYLNYMNRSGVITSRSMAVADIG IKGSIQYYLGKIIESELVGYYMTALTGPDNPYCLGKNIKALYPEPLFDKRKSSNVFKYHLMLESTLVAPEGMYIRANEDG TFVHGPHFYNQLHFEYKAEIHAGIEAFVFDMLASNGYRLGKPASPDLVDELFGLPMSGTCLISDEIKNSFHIDELFGVVN EKKIWE >Mature_725_residues ANSTSYVNNNKIRRLVEQLAVAGYDRKNIVIYGIGAVAKSIASQLTEANIVGLMDKDPGNIGRCIYGYEVLSTEVAISKA DAIVIAASEVYWDTIFRRISFMKSDYGKQIFFTNGDIADFVLAERETQMHPYWDTTHDVILSEIEHHEVISFDVFDTLIC RKISRPEDIYSIVEERANMDVLLEENFFQIRMEAVDLFQKSGDPVFSIHELYAFMTAHFGIAKERAERLKQLEIDVEIEF SEPRNEVIALYHLANRLNKRVYLISDYHMPSDILKRIFFKSGIALPTGLLVSCEVKKSKLSGALWEYYRNLIGNGKALHI GDNDIADISNPVLHGIQPCKIMSCNDMLFASSLRQIGILVRGLQDSKIVGLIQHHLFNSPFSLGANKGYPEIVTLKTFGY VFLGPLIYNYFSWLIPELASGVYNKVLFLAREGYLLKRIYDKLTDSLGLTGHPEGVYFRTSRRMASVASIMSEDDIFATL NDSFSGTAREFLENRFGIDGTNEDSSEILVQTDSKIVFLVRKYSDIILRNAAVERSNYLNYMNRSGVITSRSMAVADIGI KGSIQYYLGKIIESELVGYYMTALTGPDNPYCLGKNIKALYPEPLFDKRKSSNVFKYHLMLESTLVAPEGMYIRANEDGT FVHGPHFYNQLHFEYKAEIHAGIEAFVFDMLASNGYRLGKPASPDLVDELFGLPMSGTCLISDEIKNSFHIDELFGVVNE KKIWE
Specific function: Unknown
COG id: COG5610
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82143; Mature: 82012
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANSTSYVNNNKIRRLVEQLAVAGYDRKNIVIYGIGAVAKSIASQLTEANIVGLMDKDPG CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCEEEEECCCCC NIGRCIYGYEVLSTEVAISKADAIVIAASEVYWDTIFRRISFMKSDYGKQIFFTNGDIAD CCCCEEECHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH FVLAERETQMHPYWDTTHDVILSEIEHHEVISFDVFDTLICRKISRPEDIYSIVEERANM HHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCC DVLLEENFFQIRMEAVDLFQKSGDPVFSIHELYAFMTAHFGIAKERAERLKQLEIDVEIE EEEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE FSEPRNEVIALYHLANRLNKRVYLISDYHMPSDILKRIFFKSGIALPTGLLVSCEVKKSK ECCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEHHHH LSGALWEYYRNLIGNGKALHIGDNDIADISNPVLHGIQPCKIMSCNDMLFASSLRQIGIL HHHHHHHHHHHHHCCCCEEEECCCCHHHCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHH VRGLQDSKIVGLIQHHLFNSPFSLGANKGYPEIVTLKTFGYVFLGPLIYNYFSWLIPELA HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH SGVYNKVLFLAREGYLLKRIYDKLTDSLGLTGHPEGVYFRTSRRMASVASIMSEDDIFAT HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEE LNDSFSGTAREFLENRFGIDGTNEDSSEILVQTDSKIVFLVRKYSDIILRNAAVERSNYL ECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHH NYMNRSGVITSRSMAVADIGIKGSIQYYLGKIIESELVGYYMTALTGPDNPYCLGKNIKA HHHCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCC LYPEPLFDKRKSSNVFKYHLMLESTLVAPEGMYIRANEDGTFVHGPHFYNQLHFEYKAEI CCCCCCCCCCCCCCEEEEEEEEEHHEECCCCEEEEECCCCCEEECCHHHHHCCEEEEHHH HAGIEAFVFDMLASNGYRLGKPASPDLVDELFGLPMSGTCLISDEIKNSFHIDELFGVVN HHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHHHHC EKKIWE HHCCCC >Mature Secondary Structure ANSTSYVNNNKIRRLVEQLAVAGYDRKNIVIYGIGAVAKSIASQLTEANIVGLMDKDPG CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCEEEEECCCCC NIGRCIYGYEVLSTEVAISKADAIVIAASEVYWDTIFRRISFMKSDYGKQIFFTNGDIAD CCCCEEECHHHHHHHHEEECCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH FVLAERETQMHPYWDTTHDVILSEIEHHEVISFDVFDTLICRKISRPEDIYSIVEERANM HHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCC DVLLEENFFQIRMEAVDLFQKSGDPVFSIHELYAFMTAHFGIAKERAERLKQLEIDVEIE EEEEECCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE FSEPRNEVIALYHLANRLNKRVYLISDYHMPSDILKRIFFKSGIALPTGLLVSCEVKKSK ECCCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEEEHHHH LSGALWEYYRNLIGNGKALHIGDNDIADISNPVLHGIQPCKIMSCNDMLFASSLRQIGIL HHHHHHHHHHHHHCCCCEEEECCCCHHHCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHH VRGLQDSKIVGLIQHHLFNSPFSLGANKGYPEIVTLKTFGYVFLGPLIYNYFSWLIPELA HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH SGVYNKVLFLAREGYLLKRIYDKLTDSLGLTGHPEGVYFRTSRRMASVASIMSEDDIFAT HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCCEEEE LNDSFSGTAREFLENRFGIDGTNEDSSEILVQTDSKIVFLVRKYSDIILRNAAVERSNYL ECCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHH NYMNRSGVITSRSMAVADIGIKGSIQYYLGKIIESELVGYYMTALTGPDNPYCLGKNIKA HHHCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCC LYPEPLFDKRKSSNVFKYHLMLESTLVAPEGMYIRANEDGTFVHGPHFYNQLHFEYKAEI CCCCCCCCCCCCCCEEEEEEEEEHHEECCCCEEEEECCCCCEEECCHHHHHCCEEEEHHH HAGIEAFVFDMLASNGYRLGKPASPDLVDELFGLPMSGTCLISDEIKNSFHIDELFGVVN HHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHCCCCCCEEEEEHHHCCCCCHHHHHHHHC EKKIWE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA