Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is 118581702

Identifier: 118581702

GI number: 118581702

Start: 3638637

End: 3639770

Strand: Reverse

Name: 118581702

Synonym: Ppro_3302

Alternate gene names: NA

Gene position: 3639770-3638637 (Counterclockwise)

Preceding gene: 118581703

Following gene: 118581701

Centisome position: 90.81

GC content: 63.84

Gene sequence:

>1134_bases
ATGAAAAATCCAAAGATCTCAGATATAGTTGGAATTATTGCGAAAATGGCTCCGTCGGGTCTGGCGGAGTCGTGGGATAA
CTCCGGTCTGCAGCTGGGCGACCCGTCGGCCATGGTGTCACGAATCATGGTCAGCCTGGACGCCACCATGGCTACCATCC
AATCGGCCCTTGCCTGCGACTGCCAGCTCCTCATCAGCCACCATCCCCTGATCTTCAACGCTCCGAAATCCATATCAGCA
ACTACCCCCCAGGGGGCGTGCATCCATGCCGCCATTCGCGGCGGTCTTTCCATTATCAGCATGCACACCAGCTACGATTG
CGCCGAAGGCGGCCTGAATGACCTGCTGGCACGGCGCATCGGCCTTTCCGCCTGCTCGCCGCTCCAGGTGACGTCCGTGC
GGGAACTGGTCAAACTGGCGGTCTATGTTCCCGGCGAGCATCTGGAGCGGTTGCGCTTGGCGCTCCTGCCCCACAGCGAG
AAGCTGGGTGCCTACAGCGGCTGCTCCTTTGCCGCCCCCGGCCAGGGAACTTTTACCCCACTGGATGGAGCGCACCCCTT
CGTCGGGACCGTCGGCTCCCGGGAGATGGTTGATGAGCAGCGCCTGGAGCTGCTCCTGGACCGGGCCGCTCTCCCGCGCG
CAATCAAGTCCCTTCTGGCCGCCCATCCCTACGAGGAGCCGGCCTATGACATCTACCCGCTGCTCAACGAGGGGCGCAAG
CTTGGCCTGGGACGGGTCGGCCGCTTGCCGGAAGCGGTTTCCCTGGCCGGCTTTGCGGAGCGGCTCAGCCGGGATCTTGC
GGCGCCGGGCCTGCGCTTTGTGGGGAATCCGGAGGCACGGGTGAGCAAGGTGGCCCTCTGCGGCGGCAGCGGTGCCTCGC
TGATGCGGGCGGCCGTGCGGGCCGGCGCCGACGTGCTGGTGAGCGGCGATATCAAGTATCACGACGCCCGTGATGCGGAG
AATCTGGGACTTGCCCTGGTGGATGCAGGCCATTTTGCCACCGAGATCATCATGGTGGACGGGGTGACCGAACGGCTTGG
CCGGATGCTTGCCGAGGCGGGATATGCGGAATGCGGCGTCGTGCCCTGTTGCGTTGAAAACGATCCATTCCGCTGTGTGA
GTCAGAGTACCTAA

Upstream 100 bases:

>100_bases
AGAGTCGCCGGATGCCGGCAAAACGAGAGACGGGGCGACCCATGTTATCACATGCTCAAGAGTGCACACCGAAAGGTTGC
ACTCTTTTTCTTTGTAGCGA

Downstream 100 bases:

>100_bases
GGAAGCGCGACACAAATAAAGAGTATTGGGAGGACGCTGTTTTGAAAAAGAAACTTGAGATGTTGGAGCAACTGCAGGAG
ATCGACACTCAGATCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACDCQLLISHHPLIFNAPKSISA
TTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRIGLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSE
KLGAYSGCSFAAPGQGTFTPLDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK
LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVRAGADVLVSGDIKYHDARDAE
NLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGVVPCCVENDPFRCVSQST

Sequences:

>Translated_377_residues
MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACDCQLLISHHPLIFNAPKSISA
TTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRIGLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSE
KLGAYSGCSFAAPGQGTFTPLDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK
LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVRAGADVLVSGDIKYHDARDAE
NLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGVVPCCVENDPFRCVSQST
>Mature_377_residues
MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACDCQLLISHHPLIFNAPKSISA
TTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRIGLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSE
KLGAYSGCSFAAPGQGTFTPLDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK
LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVRAGADVLVSGDIKYHDARDAE
NLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGVVPCCVENDPFRCVSQST

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6321217, Length=124, Percent_Identity=31.4516129032258, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19921430, Length=127, Percent_Identity=29.9212598425197, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 39748; Mature: 39748

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACD
CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CQLLISHHPLIFNAPKSISATTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRI
HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCHHHCCHHHHHHHHH
GLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSEKLGAYSGCSFAAPGQGTFTP
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC
LDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVR
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHEEEEEECCCCHHHHHHHHH
AGADVLVSGDIKYHDARDAENLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGV
CCCCEEEECCEEECCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC
VPCCVENDPFRCVSQST
EEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKNPKISDIVGIIAKMAPSGLAESWDNSGLQLGDPSAMVSRIMVSLDATMATIQSALACD
CCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
CQLLISHHPLIFNAPKSISATTPQGACIHAAIRGGLSIISMHTSYDCAEGGLNDLLARRI
HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCCEEEEEEECCCCHHHCCHHHHHHHHH
GLSACSPLQVTSVRELVKLAVYVPGEHLERLRLALLPHSEKLGAYSGCSFAAPGQGTFTP
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCC
LDGAHPFVGTVGSREMVDEQRLELLLDRAALPRAIKSLLAAHPYEEPAYDIYPLLNEGRK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE
LGLGRVGRLPEAVSLAGFAERLSRDLAAPGLRFVGNPEARVSKVALCGGSGASLMRAAVR
ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHEEEEEECCCCHHHHHHHHH
AGADVLVSGDIKYHDARDAENLGLALVDAGHFATEIIMVDGVTERLGRMLAEAGYAECGV
CCCCEEEECCEEECCCCCCCCCCEEEEECCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC
VPCCVENDPFRCVSQST
EEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]