| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581668
Identifier: 118581668
GI number: 118581668
Start: 3598019
End: 3600472
Strand: Reverse
Name: 118581668
Synonym: Ppro_3268
Alternate gene names: NA
Gene position: 3600472-3598019 (Counterclockwise)
Preceding gene: 118581669
Following gene: 118581667
Centisome position: 89.83
GC content: 60.72
Gene sequence:
>2454_bases GTGGAACGTTTCGTCTGCATCCATGGCCATTTCTACCAGCCCCCACGGGAAAACCCCTGGCTTGAGGTAGTCGAGATTCA GGATTCAGCCTATCCCTACCATGACTGGAACGAGCGCATCACCGCCGAGTGCTATGCACCCAACACAGCCGCACGGAATC TGGATGGCGAGGGGAACATCATGGGCATCGTCAGCAACTATGCCCGAATCAGCTTCAATTTCGGCCCGACCCTTCTCTCC TGGATGGAACGTTTCGCTCCCGAAACCTACCGGGCGATCTTGGCGGCGGACCAGCAGAGCATCAGCTGGCGTTCCGGCCA TGGCGCCGCCCTGGCCCAGGTGTACAACCACGTCATCATGCCCCTGGCCCCCCTGGCCGACAAGCGGACCCAGGTGCGCT GGGGGATCGAGGATTTCCGGCATCGTTTCCGGCGCCTTCCCGAAGGGATGTGGCTGGCGGAGACCGCCGCGGACACGGAA ACCCTGGAGGTGCTGGTCGAGGAGGGGATCCTCTTCACCATCCTGGCCCCCCGCCAAGCCGCGCGGGTCAGGAGAATAGG CGCCGAAAGGTGGAAGGATGTGGGCGGCTCACGCATCGACCCTTCGCGCCCCTATCTCTGCCGGCTTCCCTCCGGCCGTT CCATCGTGCTCTTCTTCTACGACGGCCCCATTTCACAGGCGGTGGCTTTTGAAAAACTGCTCGACAGCGGAGAGCAGTTC GCTACCCGTTTGATGTCCGGATTTTCGGCTTACCGTAGTCATCCCCAGCTGGTGCACATCGCCACCGATGGCGAGACCTA CGGCCATCACCACCAGTTCGGCGAAATGGCGCTGGGGCGTGCCTTGGACCAGATCGAACTGAACGGGCTGGCCCGTTTGA CCAACTACGGCGAGTATTTGGAACTTCATCCCCCCACCCACGAAGTGCGGATTGTCGAGAACGGCTCCTGGAGCTGCGAG CATGGTATCGAGCGTTGGAGGAACGACTGTGGCTGCAATTCTGGCGGAAACCACGGCTGGAACCAGCGATGGCGCCGCCC CCTGCGGGATGCTCTGGACTGGCTCAGGGGGGAACTGGCGCTCTGCTTTGAGCGGGAAGCTTCCGGCTACCTGCGGGACC CGTGGGGGGCGCGCGACGACTACATCCGGGTCATGCTGGACCGCTCCGAGGACAACGTGGCCGCCTTCCTGAACAGGCAT TCCCGGTGTCCACTGTGCGAGGGGGATACGGTGGTGCTGCTCCGGCTTCTGGAGATGCAGCGCCACTCCCTCCTCATGTA TACCAGCTGCGGATGGTTCTTTGACGAACTGTCGGGGCTGGAGACGGTTCAGATTCTCCAGTATGCCGGACGGGCCGTGC AACTTGCTGAAATGCAGCACTGCCAGTCCATCAAGGGTGCCTTTCTGGAGCGATTGGCCCTGGCCGCCAGCAATCTGGCG GAATGGGGGACCGGGGCCGATATTTACGCCCGCTGCGTGGAACCGGCCCGGGTCGATCTGATCCGGGTCGGCGCCCATTA CGCCGTCAGCTCTGTCTTCGAAGAGTACGGTGAGGTGACCGAGATCTTCAGTTACCGCATCCTGCGGGAGGAACTGCTGG TTCTGTCGTCCGGCCCCATGAAGTTGGCGCTGGGAAAGGTGTTCATTCGCTCCTCCATTACCCGTTCCTCTGACAGGGTC AGCTTCTGCACTCTCTCCTTTGGCGGTCACGCCCTGAACTGCGGCGTGCGCTCCTTCCTGGGGAAAGATGCCTACCAGGC CATGAAAAAGGAGGTTGTCGGTGCCTTCGACTGCGCCGATTTTGCCGCCATCATCAGACTGTTGGATATCCATTTCGGCA TGCACACCTACTCCCTCAGGGATCTGTTCCGGGATGAACAGCGCCACATCCTGAACCTGATCATCGCCGGTACGCTTCAG GAGTTCGAGGACAGGTTTTTCACCCTCTTCGAAAACAACCGCAGACTGATGAGCGTCCTGAGGGAAACCGGCATGCCGGT GCCGCGCTGCTTTATGACGACCGCAGAGACGGCCCTCAACCAGGAGTTGCAGAAGATATTCACCGCGGACATCATTCATA TGGAGCATCTCAGGGAGGTGGTCAGAGCGGTCGGTGAATGGCGCGTGGCCGTGGATGACGTGAGACTGGAATTCATAATC CGCCGCAGGCTGGAAGGGGCCATGCTGGCGCTCCTGGAGAAACCGGAAGATGCGTCTCTCATGACGGTGGTGCTGCAGCT GGTGGAAGCTATTACGGCTCTGCCGCTCAAGGTAAACCTGTGGCAGACACAGAACCTGTTTGCCGCCATGCTGCGCTCGA ATGCGGGTGAGCTCAGAGCTGCTGATGGCGGAGAGGATAATCGCGGTTCCTGGCGCAGTGCGATCCACAACCTTGGCAGG CTGTTGTATTTCAATGTTCCGGAACTGCTGGCAGCGAAGGAGGGAGATTCGTGA
Upstream 100 bases:
>100_bases TTCCGTCTGATCGTTCCTGCTGCGCAGGAAGCACAGCCGGTGGGCCGCGACTGCTACTCGCTCCCTTCGGCGTGGCGCTC TTCGGAAAAGGATAAATAAA
Downstream 100 bases:
>100_bases AGGGCACGGGGCTGAGGATACCGCTGGTGACCTACCGGCTGCAGTTCAACGCTGCTTTCCACTTCAACGATGCGCGGGAG ATCGTTCCCTACCTGCACGA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Glycoside Hydrolase; Family; 4-Alpha-Glucanotransferase
Number of amino acids: Translated: 817; Mature: 817
Protein sequence:
>817_residues MERFVCIHGHFYQPPRENPWLEVVEIQDSAYPYHDWNERITAECYAPNTAARNLDGEGNIMGIVSNYARISFNFGPTLLS WMERFAPETYRAILAADQQSISWRSGHGAALAQVYNHVIMPLAPLADKRTQVRWGIEDFRHRFRRLPEGMWLAETAADTE TLEVLVEEGILFTILAPRQAARVRRIGAERWKDVGGSRIDPSRPYLCRLPSGRSIVLFFYDGPISQAVAFEKLLDSGEQF ATRLMSGFSAYRSHPQLVHIATDGETYGHHHQFGEMALGRALDQIELNGLARLTNYGEYLELHPPTHEVRIVENGSWSCE HGIERWRNDCGCNSGGNHGWNQRWRRPLRDALDWLRGELALCFEREASGYLRDPWGARDDYIRVMLDRSEDNVAAFLNRH SRCPLCEGDTVVLLRLLEMQRHSLLMYTSCGWFFDELSGLETVQILQYAGRAVQLAEMQHCQSIKGAFLERLALAASNLA EWGTGADIYARCVEPARVDLIRVGAHYAVSSVFEEYGEVTEIFSYRILREELLVLSSGPMKLALGKVFIRSSITRSSDRV SFCTLSFGGHALNCGVRSFLGKDAYQAMKKEVVGAFDCADFAAIIRLLDIHFGMHTYSLRDLFRDEQRHILNLIIAGTLQ EFEDRFFTLFENNRRLMSVLRETGMPVPRCFMTTAETALNQELQKIFTADIIHMEHLREVVRAVGEWRVAVDDVRLEFII RRRLEGAMLALLEKPEDASLMTVVLQLVEAITALPLKVNLWQTQNLFAAMLRSNAGELRAADGGEDNRGSWRSAIHNLGR LLYFNVPELLAAKEGDS
Sequences:
>Translated_817_residues MERFVCIHGHFYQPPRENPWLEVVEIQDSAYPYHDWNERITAECYAPNTAARNLDGEGNIMGIVSNYARISFNFGPTLLS WMERFAPETYRAILAADQQSISWRSGHGAALAQVYNHVIMPLAPLADKRTQVRWGIEDFRHRFRRLPEGMWLAETAADTE TLEVLVEEGILFTILAPRQAARVRRIGAERWKDVGGSRIDPSRPYLCRLPSGRSIVLFFYDGPISQAVAFEKLLDSGEQF ATRLMSGFSAYRSHPQLVHIATDGETYGHHHQFGEMALGRALDQIELNGLARLTNYGEYLELHPPTHEVRIVENGSWSCE HGIERWRNDCGCNSGGNHGWNQRWRRPLRDALDWLRGELALCFEREASGYLRDPWGARDDYIRVMLDRSEDNVAAFLNRH SRCPLCEGDTVVLLRLLEMQRHSLLMYTSCGWFFDELSGLETVQILQYAGRAVQLAEMQHCQSIKGAFLERLALAASNLA EWGTGADIYARCVEPARVDLIRVGAHYAVSSVFEEYGEVTEIFSYRILREELLVLSSGPMKLALGKVFIRSSITRSSDRV SFCTLSFGGHALNCGVRSFLGKDAYQAMKKEVVGAFDCADFAAIIRLLDIHFGMHTYSLRDLFRDEQRHILNLIIAGTLQ EFEDRFFTLFENNRRLMSVLRETGMPVPRCFMTTAETALNQELQKIFTADIIHMEHLREVVRAVGEWRVAVDDVRLEFII RRRLEGAMLALLEKPEDASLMTVVLQLVEAITALPLKVNLWQTQNLFAAMLRSNAGELRAADGGEDNRGSWRSAIHNLGR LLYFNVPELLAAKEGDS >Mature_817_residues MERFVCIHGHFYQPPRENPWLEVVEIQDSAYPYHDWNERITAECYAPNTAARNLDGEGNIMGIVSNYARISFNFGPTLLS WMERFAPETYRAILAADQQSISWRSGHGAALAQVYNHVIMPLAPLADKRTQVRWGIEDFRHRFRRLPEGMWLAETAADTE TLEVLVEEGILFTILAPRQAARVRRIGAERWKDVGGSRIDPSRPYLCRLPSGRSIVLFFYDGPISQAVAFEKLLDSGEQF ATRLMSGFSAYRSHPQLVHIATDGETYGHHHQFGEMALGRALDQIELNGLARLTNYGEYLELHPPTHEVRIVENGSWSCE HGIERWRNDCGCNSGGNHGWNQRWRRPLRDALDWLRGELALCFEREASGYLRDPWGARDDYIRVMLDRSEDNVAAFLNRH SRCPLCEGDTVVLLRLLEMQRHSLLMYTSCGWFFDELSGLETVQILQYAGRAVQLAEMQHCQSIKGAFLERLALAASNLA EWGTGADIYARCVEPARVDLIRVGAHYAVSSVFEEYGEVTEIFSYRILREELLVLSSGPMKLALGKVFIRSSITRSSDRV SFCTLSFGGHALNCGVRSFLGKDAYQAMKKEVVGAFDCADFAAIIRLLDIHFGMHTYSLRDLFRDEQRHILNLIIAGTLQ EFEDRFFTLFENNRRLMSVLRETGMPVPRCFMTTAETALNQELQKIFTADIIHMEHLREVVRAVGEWRVAVDDVRLEFII RRRLEGAMLALLEKPEDASLMTVVLQLVEAITALPLKVNLWQTQNLFAAMLRSNAGELRAADGGEDNRGSWRSAIHNLGR LLYFNVPELLAAKEGDS
Specific function: Unknown
COG id: COG1449
COG function: function code G; Alpha-amylase/alpha-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92945; Mature: 92945
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERFVCIHGHFYQPPRENPWLEVVEIQDSAYPYHDWNERITAECYAPNTAARNLDGEGNI CCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCHHCCCCCCCCE MGIVSNYARISFNFGPTLLSWMERFAPETYRAILAADQQSISWRSGHGAALAQVYNHVIM EEEEECCEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH PLAPLADKRTQVRWGIEDFRHRFRRLPEGMWLAETAADTETLEVLVEEGILFTILAPRQA CCCCCCCCCHHHEECHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHCCEEEEEECCHHH ARVRRIGAERWKDVGGSRIDPSRPYLCRLPSGRSIVLFFYDGPISQAVAFEKLLDSGEQF HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCHHHH ATRLMSGFSAYRSHPQLVHIATDGETYGHHHQFGEMALGRALDQIELNGLARLTNYGEYL HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ELHPPTHEVRIVENGSWSCEHGIERWRNDCGCNSGGNHGWNQRWRRPLRDALDWLRGELA EECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LCFEREASGYLRDPWGARDDYIRVMLDRSEDNVAAFLNRHSRCPLCEGDTVVLLRLLEMQ EEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RHSLLMYTSCGWFFDELSGLETVQILQYAGRAVQLAEMQHCQSIKGAFLERLALAASNLA HCCEEEEECCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWGTGADIYARCVEPARVDLIRVGAHYAVSSVFEEYGEVTEIFSYRILREELLVLSSGPM HCCCCHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KLALGKVFIRSSITRSSDRVSFCTLSFGGHALNCGVRSFLGKDAYQAMKKEVVGAFDCAD HHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHCHHHHHHHHHHHHCCCCHHH FAAIIRLLDIHFGMHTYSLRDLFRDEQRHILNLIIAGTLQEFEDRFFTLFENNRRLMSVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RETGMPVPRCFMTTAETALNQELQKIFTADIIHMEHLREVVRAVGEWRVAVDDVRLEFII HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHH RRRLEGAMLALLEKPEDASLMTVVLQLVEAITALPLKVNLWQTQNLFAAMLRSNAGELRA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCEEE ADGGEDNRGSWRSAIHNLGRLLYFNVPELLAAKEGDS CCCCCCCCCHHHHHHHHCCCEEEECCHHHHHCCCCCC >Mature Secondary Structure MERFVCIHGHFYQPPRENPWLEVVEIQDSAYPYHDWNERITAECYAPNTAARNLDGEGNI CCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCHHCCCCCCCCE MGIVSNYARISFNFGPTLLSWMERFAPETYRAILAADQQSISWRSGHGAALAQVYNHVIM EEEEECCEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH PLAPLADKRTQVRWGIEDFRHRFRRLPEGMWLAETAADTETLEVLVEEGILFTILAPRQA CCCCCCCCCHHHEECHHHHHHHHHHCCCCCEEEHHHCCHHHHHHHHHCCEEEEEECCHHH ARVRRIGAERWKDVGGSRIDPSRPYLCRLPSGRSIVLFFYDGPISQAVAFEKLLDSGEQF HHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCHHHH ATRLMSGFSAYRSHPQLVHIATDGETYGHHHQFGEMALGRALDQIELNGLARLTNYGEYL HHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ELHPPTHEVRIVENGSWSCEHGIERWRNDCGCNSGGNHGWNQRWRRPLRDALDWLRGELA EECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LCFEREASGYLRDPWGARDDYIRVMLDRSEDNVAAFLNRHSRCPLCEGDTVVLLRLLEMQ EEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RHSLLMYTSCGWFFDELSGLETVQILQYAGRAVQLAEMQHCQSIKGAFLERLALAASNLA HCCEEEEECCCHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWGTGADIYARCVEPARVDLIRVGAHYAVSSVFEEYGEVTEIFSYRILREELLVLSSGPM HCCCCHHHHHHHCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH KLALGKVFIRSSITRSSDRVSFCTLSFGGHALNCGVRSFLGKDAYQAMKKEVVGAFDCAD HHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHCHHHHHHHHHHHHCCCCHHH FAAIIRLLDIHFGMHTYSLRDLFRDEQRHILNLIIAGTLQEFEDRFFTLFENNRRLMSVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH RETGMPVPRCFMTTAETALNQELQKIFTADIIHMEHLREVVRAVGEWRVAVDDVRLEFII HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHHH RRRLEGAMLALLEKPEDASLMTVVLQLVEAITALPLKVNLWQTQNLFAAMLRSNAGELRA HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCEEE ADGGEDNRGSWRSAIHNLGRLLYFNVPELLAAKEGDS CCCCCCCCCHHHHHHHHCCCEEEECCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA