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The map label for this gene is yjeP [H]

Identifier: 118581659

GI number: 118581659

Start: 3579668

End: 3581470

Strand: Reverse

Name: yjeP [H]

Synonym: Ppro_3258

Alternate gene names: 118581659

Gene position: 3581470-3579668 (Counterclockwise)

Preceding gene: 118581661

Following gene: 118581658

Centisome position: 89.36

GC content: 60.79

Gene sequence:

>1803_bases
ATGAGGCTGAGCCGGCAGCTGCCGCTCAAAACAGGGGCACAGAGGAGTCCGGATATGAATAGCATCACCGGAAGGCCGAG
GCTGAAGCAGCTTGTCATGCTCTTCTCCACCGCATGCATGATTCTGCTCGTCACCGTGACAACTGCAATCGCCGCACCGG
CACAGAAAAAAACCGTCGATAAGGAGTCGCCAGCGATCCAGGCCGTTCCGGTGCCCGTTCCCGAGGCCCAGGTCGAGCTT
GACGGCAAGCCGCTGTTCCCCATCAAGACCAAAGTCCTCTCCCTGCTGCCGGAGGAACGGGCCAAAACCATATCGATACG
GCTGCTCAGGCTGGTCAAAAACCCCCTGTTCCACCTGGATTCCCTGAAGGTCGTTGACAACGACATCACCAGCGATATCG
TTTCAGACGACCTGATTATCATGAGCGTCAGCGAGGCCGATGCCCTGGCCGAGGGGAAGCCGCGTCCCCAGCTGGCCCGG
GAGTTCGCCGGGAAGATCCGCGCCGCGATGGAGGCACGCAACCGGGAGTACAGTACCCGCAGCCTGCTGTTCGGCGCGCT
GTACACGCTGCTGTCCACCCTGGTGCTGATTGCCACCCTCTCCCTGATCCGCCGCTTCTTTCCCCGCCTGATCGCCAACA
TCCACTCCTGGCGCGGCAGCTACATCCGCTCCATACGCATCCAGTCCATCGAGGTGCTTAATGAAGAGCGGATAGTCGCG
CTGATCACCTCGATCCTGCGTAGCATCCGGCTGCTGCTCCTGCTGGGGCTGTTCTACCTCTACATCCCCCTGGTGCTGAG
CTTCTTCCCCTGGACACGGGGTATGGCCTCGAAGCTCTTCGACTACATTCTGACCCCCCTGGAGAAGCTGTTTCACGCTG
CCGTCTCCTACCTGCCCAACATCTTCTTCCTGCTGGTCATCCTGGCTATCGCCCACTACACTATCCGGCTCACCCGCTTC
ATATTTTCCGAGATCGAGAAGCAGACCATCAGCATCCCCGGTTTTTTCCCGGAGTGGGCCGATCCCAGCTTCAAGATAAC
CCGCTTTTTGATCCTGGCCTTCGCGGCCGTGGTGGCCTTCCCCTACCTGCCCGGTTCCGGATCGCCGGCATTCAGGGGGG
TATCGGTCTTTCTGGGGGTGCTCTTCTCCCTGGGATCGACATCGGCCGTGGCCAACGTGGTGGCAGGGGTAATCCTGACC
TACATGCGCGCCTTCAAGCTGGGTGACCGGGTCAAGATCGCCGACACCATGGGTGACGTGGTGGAGAAGAACCTGCTGGT
GACCCGCGTGCGCACGATCAAGAACGTGGATATCACCATCCCCAACGCCATGGTGCTGGGGAGCCATGTCGTCAACTACA
GCTCGTCATCCCAAAACTACGGCCTGATCCTCAACACCACGATAACCATCGGCTACGACGCCCCCTGGCGCCAAGTCCAC
GAACTGCTGATCTCCGCCGCACGAGCCACCGGAAACATACTGGAACTGCCGGCCCCCTTCGTGCTTCAGACCGCCCTCAA
CGACTTCTATGTCAGCTACGAGATCAACGCCTACACCGACAAGCCGTCGGTCATGGCGCGCACCTATTCCGAACTGCACC
AGAACATCCAGGACGCCTTCAACGAGGCGGGGGTCGAGATCATGTCGCCGCACTACTCCACGCTGCGCGACGGCAACCGG
ACCACCATCCCCGATGCCTACCTGGCCAAGGACTACCGGGAGCCCTCTTTTCGTGTTACAAGGGTGGCTGGAGAACGGGG
TGGGGAATCCCGGGCCACGGAAGGAAAGGGGGTGCGCGGGTGA

Upstream 100 bases:

>100_bases
TGATCGGGGTCTTTTCCATCATCCTGCAGGGGATGACCCTGGGGAGCCTGGTGAACCGCATCTATCCCGATATACCGGGA
GAGTCGTACGGAGACTGAAC

Downstream 100 bases:

>100_bases
ACGGACAGGGGGGAGAGGCGGCGGCGTTCGCGAGGCTTGTGTGGCAGCGGCTGTCGGTGAAGCTGTCGGGCTATATCGAT
AAAAAGACGGGCAGCATCAA

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MRLSRQLPLKTGAQRSPDMNSITGRPRLKQLVMLFSTACMILLVTVTTAIAAPAQKKTVDKESPAIQAVPVPVPEAQVEL
DGKPLFPIKTKVLSLLPEERAKTISIRLLRLVKNPLFHLDSLKVVDNDITSDIVSDDLIIMSVSEADALAEGKPRPQLAR
EFAGKIRAAMEARNREYSTRSLLFGALYTLLSTLVLIATLSLIRRFFPRLIANIHSWRGSYIRSIRIQSIEVLNEERIVA
LITSILRSIRLLLLLGLFYLYIPLVLSFFPWTRGMASKLFDYILTPLEKLFHAAVSYLPNIFFLLVILAIAHYTIRLTRF
IFSEIEKQTISIPGFFPEWADPSFKITRFLILAFAAVVAFPYLPGSGSPAFRGVSVFLGVLFSLGSTSAVANVVAGVILT
YMRAFKLGDRVKIADTMGDVVEKNLLVTRVRTIKNVDITIPNAMVLGSHVVNYSSSSQNYGLILNTTITIGYDAPWRQVH
ELLISAARATGNILELPAPFVLQTALNDFYVSYEINAYTDKPSVMARTYSELHQNIQDAFNEAGVEIMSPHYSTLRDGNR
TTIPDAYLAKDYREPSFRVTRVAGERGGESRATEGKGVRG

Sequences:

>Translated_600_residues
MRLSRQLPLKTGAQRSPDMNSITGRPRLKQLVMLFSTACMILLVTVTTAIAAPAQKKTVDKESPAIQAVPVPVPEAQVEL
DGKPLFPIKTKVLSLLPEERAKTISIRLLRLVKNPLFHLDSLKVVDNDITSDIVSDDLIIMSVSEADALAEGKPRPQLAR
EFAGKIRAAMEARNREYSTRSLLFGALYTLLSTLVLIATLSLIRRFFPRLIANIHSWRGSYIRSIRIQSIEVLNEERIVA
LITSILRSIRLLLLLGLFYLYIPLVLSFFPWTRGMASKLFDYILTPLEKLFHAAVSYLPNIFFLLVILAIAHYTIRLTRF
IFSEIEKQTISIPGFFPEWADPSFKITRFLILAFAAVVAFPYLPGSGSPAFRGVSVFLGVLFSLGSTSAVANVVAGVILT
YMRAFKLGDRVKIADTMGDVVEKNLLVTRVRTIKNVDITIPNAMVLGSHVVNYSSSSQNYGLILNTTITIGYDAPWRQVH
ELLISAARATGNILELPAPFVLQTALNDFYVSYEINAYTDKPSVMARTYSELHQNIQDAFNEAGVEIMSPHYSTLRDGNR
TTIPDAYLAKDYREPSFRVTRVAGERGGESRATEGKGVRG
>Mature_600_residues
MRLSRQLPLKTGAQRSPDMNSITGRPRLKQLVMLFSTACMILLVTVTTAIAAPAQKKTVDKESPAIQAVPVPVPEAQVEL
DGKPLFPIKTKVLSLLPEERAKTISIRLLRLVKNPLFHLDSLKVVDNDITSDIVSDDLIIMSVSEADALAEGKPRPQLAR
EFAGKIRAAMEARNREYSTRSLLFGALYTLLSTLVLIATLSLIRRFFPRLIANIHSWRGSYIRSIRIQSIEVLNEERIVA
LITSILRSIRLLLLLGLFYLYIPLVLSFFPWTRGMASKLFDYILTPLEKLFHAAVSYLPNIFFLLVILAIAHYTIRLTRF
IFSEIEKQTISIPGFFPEWADPSFKITRFLILAFAAVVAFPYLPGSGSPAFRGVSVFLGVLFSLGSTSAVANVVAGVILT
YMRAFKLGDRVKIADTMGDVVEKNLLVTRVRTIKNVDITIPNAMVLGSHVVNYSSSSQNYGLILNTTITIGYDAPWRQVH
ELLISAARATGNILELPAPFVLQTALNDFYVSYEINAYTDKPSVMARTYSELHQNIQDAFNEAGVEIMSPHYSTLRDGNR
TTIPDAYLAKDYREPSFRVTRVAGERGGESRATEGKGVRG

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI2367355, Length=208, Percent_Identity=25.9615384615385, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786670, Length=230, Percent_Identity=22.6086956521739, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 66772; Mature: 66772

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSRQLPLKTGAQRSPDMNSITGRPRLKQLVMLFSTACMILLVTVTTAIAAPAQKKTVD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
KESPAIQAVPVPVPEAQVELDGKPLFPIKTKVLSLLPEERAKTISIRLLRLVKNPLFHLD
CCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
SLKVVDNDITSDIVSDDLIIMSVSEADALAEGKPRPQLAREFAGKIRAAMEARNREYSTR
CHHHHHCHHHHHHHCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
SLLFGALYTLLSTLVLIATLSLIRRFFPRLIANIHSWRGSYIRSIRIQSIEVLNEERIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LITSILRSIRLLLLLGLFYLYIPLVLSFFPWTRGMASKLFDYILTPLEKLFHAAVSYLPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFLLVILAIAHYTIRLTRFIFSEIEKQTISIPGFFPEWADPSFKITRFLILAFAAVVAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
PYLPGSGSPAFRGVSVFLGVLFSLGSTSAVANVVAGVILTYMRAFKLGDRVKIADTMGDV
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
VEKNLLVTRVRTIKNVDITIPNAMVLGSHVVNYSSSSQNYGLILNTTITIGYDAPWRQVH
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHH
ELLISAARATGNILELPAPFVLQTALNDFYVSYEINAYTDKPSVMARTYSELHQNIQDAF
HHHHHHHHHCCCEEECCCHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
NEAGVEIMSPHYSTLRDGNRTTIPDAYLAKDYREPSFRVTRVAGERGGESRATEGKGVRG
HHCCCEEECCCHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLSRQLPLKTGAQRSPDMNSITGRPRLKQLVMLFSTACMILLVTVTTAIAAPAQKKTVD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
KESPAIQAVPVPVPEAQVELDGKPLFPIKTKVLSLLPEERAKTISIRLLRLVKNPLFHLD
CCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC
SLKVVDNDITSDIVSDDLIIMSVSEADALAEGKPRPQLAREFAGKIRAAMEARNREYSTR
CHHHHHCHHHHHHHCCCEEEEEECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
SLLFGALYTLLSTLVLIATLSLIRRFFPRLIANIHSWRGSYIRSIRIQSIEVLNEERIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LITSILRSIRLLLLLGLFYLYIPLVLSFFPWTRGMASKLFDYILTPLEKLFHAAVSYLPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFLLVILAIAHYTIRLTRFIFSEIEKQTISIPGFFPEWADPSFKITRFLILAFAAVVAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
PYLPGSGSPAFRGVSVFLGVLFSLGSTSAVANVVAGVILTYMRAFKLGDRVKIADTMGDV
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
VEKNLLVTRVRTIKNVDITIPNAMVLGSHVVNYSSSSQNYGLILNTTITIGYDAPWRQVH
HHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHH
ELLISAARATGNILELPAPFVLQTALNDFYVSYEINAYTDKPSVMARTYSELHQNIQDAF
HHHHHHHHHCCCEEECCCHHHHHHHHHHEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
NEAGVEIMSPHYSTLRDGNRTTIPDAYLAKDYREPSFRVTRVAGERGGESRATEGKGVRG
HHCCCEEECCCHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3042771 [H]