| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581658
Identifier: 118581658
GI number: 118581658
Start: 3578052
End: 3579671
Strand: Reverse
Name: 118581658
Synonym: Ppro_3257
Alternate gene names: NA
Gene position: 3579671-3578052 (Counterclockwise)
Preceding gene: 118581659
Following gene: 118581653
Centisome position: 89.31
GC content: 64.14
Gene sequence:
>1620_bases GTGAACGGACAGGGGGGAGAGGCGGCGGCGTTCGCGAGGCTTGTGTGGCAGCGGCTGTCGGTGAAGCTGTCGGGCTATAT CGATAAAAAGACGGGCAGCATCAACCACCGGGAGGTGATCTCGGAATTGGTGCATCGCTCGGCAATGACCGAGGGGTATC TCTCCTCCATCCTGCTTGCCAACCTGATCGCGCTTTTGGGGCTTCTGACCAACAGCGTGGCGGTGGTGATCGGCGCCATG CTGATCTCGCCGCTGATGGGACCGATCTTCTCCCTAGGGCTGGCCTTCACCATGGGTGATCTGGTCCTCTCTCGCCGGGC CCTGCGCACCATCGTCTCCAGTATCCTCTTGACGGTGGTGGTGGCCGCGCTGTTCACCCTGCTCTCCCCCCTCAAGGGGG TAACCCAGGAGATCCTGGCCCGCACCCGGCCCAACGTCTACGACCTGCTGATAGCGGTCTTCGCCGGAACCGCAGGAGCC CTGGCGCTCTGCACCCGCAAGAACTACCTCTTCACCACCACCGGCGTGGCCGTTGCCACGGCGGTCATCCCCCCCTTGAG CGTGGTCGGCTACGGTCTGGGTACCTGGCAGTTGGGTATCGCCGCGGGTGGTTTCCTGCTCTTCTTCACCAACCTGGTGG CGATCGTGATCAGCTCCGACGCGGTCTTCTACTTCTACCGCTTCCGGGGCAGCATGGCCGCCGAGAGCGCCTACCCGCTC CGGCGCCGTCTGCAGATCATGGGCGGCGTGCTGGCGTTTGTGTCCATACCGTTGGCTGTTACGCTTGTCACGGACATCCG AAAGGTGAACCTCTCCCGTCGCACGGAGAACGTGCTGAAGAGCCAGCTCAACCGTCAGCACCACTCCCGCCTGACCGGCG TGTCCATCGACAGCTCCGGGGCGAAGTTGACCGTGCTGGCGTCGGTCAATACGGTCGCCTATCTGGACAGTGCCGTTCGC GCCAGGATCGAAGAGCAGCTTGCCGTCCGCATCGGCAGGCCGGTTGTCCTGGAACTGGAGCAGGTCATCGTCCGTTCCGG CGCGGTGGATCCTCCCTCCCCGCTGCGGCAGCCGGTTTCCTCCGTTGCCGCGCAGCCAGAGACCCTGGCCACCCTGCGTG AGAAGAGCATGGCGCGTCTGAGGGAGGGGTGCCGGGAGGTCGATACCTACATCGCCCCCTTCAGGGTGGCCGGCTGCACC ATCACCTTCTCCGACGGTGAACGACCCATCGGCGTGCAGGTCAGCATGCTCCGCGACGACCAGCCCGGACCCCAGGAACA GCGCTGGATCAGGACGGCGCTGGAGAAAAAACTCCAGGAGAATATCGATCTCAGGGTTGAAACGCTTCCGCTGCTGCCGC CGCCCGGCTTTACCGAAAAAGACGATCTGGACAAGGCCAGCCGCGACTCACTGGCGCTGTTGGGGCGTAGTGCCGCGCGC CTCCCTGAGTATGGGGTGCAGCTGGAGATTCCGCCTGATACGCGGAACAGCGTGGCAAGGACGAGACGGCGGGTCGCCCG CCTGAAAAGCCACCTGGTCGAGGAGCTGGGGATAGCGGCGGAACGGATAACGGTTGTGGCGGGAAAAGAGGAAACGATCA GGGTACGCTTCAGGAGGTAG
Upstream 100 bases:
>100_bases ACCTGGCCAAGGACTACCGGGAGCCCTCTTTTCGTGTTACAAGGGTGGCTGGAGAACGGGGTGGGGAATCCCGGGCCACG GAAGGAAAGGGGGTGCGCGG
Downstream 100 bases:
>100_bases GAGTTCCGATCGGGAAGGGATTCAGGCAGGACGCGGCTGGCAAGGCTGTCCGGTTATTCGCTTCGGAAGCTGGTCCGTTG CTGTCTGGTAACCGCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MNGQGGEAAAFARLVWQRLSVKLSGYIDKKTGSINHREVISELVHRSAMTEGYLSSILLANLIALLGLLTNSVAVVIGAM LISPLMGPIFSLGLAFTMGDLVLSRRALRTIVSSILLTVVVAALFTLLSPLKGVTQEILARTRPNVYDLLIAVFAGTAGA LALCTRKNYLFTTTGVAVATAVIPPLSVVGYGLGTWQLGIAAGGFLLFFTNLVAIVISSDAVFYFYRFRGSMAAESAYPL RRRLQIMGGVLAFVSIPLAVTLVTDIRKVNLSRRTENVLKSQLNRQHHSRLTGVSIDSSGAKLTVLASVNTVAYLDSAVR ARIEEQLAVRIGRPVVLELEQVIVRSGAVDPPSPLRQPVSSVAAQPETLATLREKSMARLREGCREVDTYIAPFRVAGCT ITFSDGERPIGVQVSMLRDDQPGPQEQRWIRTALEKKLQENIDLRVETLPLLPPPGFTEKDDLDKASRDSLALLGRSAAR LPEYGVQLEIPPDTRNSVARTRRRVARLKSHLVEELGIAAERITVVAGKEETIRVRFRR
Sequences:
>Translated_539_residues MNGQGGEAAAFARLVWQRLSVKLSGYIDKKTGSINHREVISELVHRSAMTEGYLSSILLANLIALLGLLTNSVAVVIGAM LISPLMGPIFSLGLAFTMGDLVLSRRALRTIVSSILLTVVVAALFTLLSPLKGVTQEILARTRPNVYDLLIAVFAGTAGA LALCTRKNYLFTTTGVAVATAVIPPLSVVGYGLGTWQLGIAAGGFLLFFTNLVAIVISSDAVFYFYRFRGSMAAESAYPL RRRLQIMGGVLAFVSIPLAVTLVTDIRKVNLSRRTENVLKSQLNRQHHSRLTGVSIDSSGAKLTVLASVNTVAYLDSAVR ARIEEQLAVRIGRPVVLELEQVIVRSGAVDPPSPLRQPVSSVAAQPETLATLREKSMARLREGCREVDTYIAPFRVAGCT ITFSDGERPIGVQVSMLRDDQPGPQEQRWIRTALEKKLQENIDLRVETLPLLPPPGFTEKDDLDKASRDSLALLGRSAAR LPEYGVQLEIPPDTRNSVARTRRRVARLKSHLVEELGIAAERITVVAGKEETIRVRFRR >Mature_539_residues MNGQGGEAAAFARLVWQRLSVKLSGYIDKKTGSINHREVISELVHRSAMTEGYLSSILLANLIALLGLLTNSVAVVIGAM LISPLMGPIFSLGLAFTMGDLVLSRRALRTIVSSILLTVVVAALFTLLSPLKGVTQEILARTRPNVYDLLIAVFAGTAGA LALCTRKNYLFTTTGVAVATAVIPPLSVVGYGLGTWQLGIAAGGFLLFFTNLVAIVISSDAVFYFYRFRGSMAAESAYPL RRRLQIMGGVLAFVSIPLAVTLVTDIRKVNLSRRTENVLKSQLNRQHHSRLTGVSIDSSGAKLTVLASVNTVAYLDSAVR ARIEEQLAVRIGRPVVLELEQVIVRSGAVDPPSPLRQPVSSVAAQPETLATLREKSMARLREGCREVDTYIAPFRVAGCT ITFSDGERPIGVQVSMLRDDQPGPQEQRWIRTALEKKLQENIDLRVETLPLLPPPGFTEKDDLDKASRDSLALLGRSAAR LPEYGVQLEIPPDTRNSVARTRRRVARLKSHLVEELGIAAERITVVAGKEETIRVRFRR
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 58708; Mature: 58708
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGQGGEAAAFARLVWQRLSVKLSGYIDKKTGSINHREVISELVHRSAMTEGYLSSILLA CCCCCCHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLIALLGLLTNSVAVVIGAMLISPLMGPIFSLGLAFTMGDLVLSRRALRTIVSSILLTVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAALFTLLSPLKGVTQEILARTRPNVYDLLIAVFAGTAGALALCTRKNYLFTTTGVAVAT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHHHHH AVIPPLSVVGYGLGTWQLGIAAGGFLLFFTNLVAIVISSDAVFYFYRFRGSMAAESAYPL HHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHH RRRLQIMGGVLAFVSIPLAVTLVTDIRKVNLSRRTENVLKSQLNRQHHSRLTGVSIDSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC AKLTVLASVNTVAYLDSAVRARIEEQLAVRIGRPVVLELEQVIVRSGAVDPPSPLRQPVS CEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH SVAAQPETLATLREKSMARLREGCREVDTYIAPFRVAGCTITFSDGERPIGVQVSMLRDD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEECCCCCCCCEEEEEECCC QPGPQEQRWIRTALEKKLQENIDLRVETLPLLPPPGFTEKDDLDKASRDSLALLGRSAAR CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHCHHHHHHHHHHHHC LPEYGVQLEIPPDTRNSVARTRRRVARLKSHLVEELGIAAERITVVAGKEETIRVRFRR CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCEEEEEECC >Mature Secondary Structure MNGQGGEAAAFARLVWQRLSVKLSGYIDKKTGSINHREVISELVHRSAMTEGYLSSILLA CCCCCCHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH NLIALLGLLTNSVAVVIGAMLISPLMGPIFSLGLAFTMGDLVLSRRALRTIVSSILLTVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAALFTLLSPLKGVTQEILARTRPNVYDLLIAVFAGTAGALALCTRKNYLFTTTGVAVAT HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEEHHHHHHH AVIPPLSVVGYGLGTWQLGIAAGGFLLFFTNLVAIVISSDAVFYFYRFRGSMAAESAYPL HHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHH RRRLQIMGGVLAFVSIPLAVTLVTDIRKVNLSRRTENVLKSQLNRQHHSRLTGVSIDSSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC AKLTVLASVNTVAYLDSAVRARIEEQLAVRIGRPVVLELEQVIVRSGAVDPPSPLRQPVS CEEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH SVAAQPETLATLREKSMARLREGCREVDTYIAPFRVAGCTITFSDGERPIGVQVSMLRDD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEECCCCCCCCEEEEEECCC QPGPQEQRWIRTALEKKLQENIDLRVETLPLLPPPGFTEKDDLDKASRDSLALLGRSAAR CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHCHHHHHHHHHHHHC LPEYGVQLEIPPDTRNSVARTRRRVARLKSHLVEELGIAAERITVVAGKEETIRVRFRR CCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]