| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581640
Identifier: 118581640
GI number: 118581640
Start: 3558221
End: 3558916
Strand: Reverse
Name: 118581640
Synonym: Ppro_3239
Alternate gene names: NA
Gene position: 3558916-3558221 (Counterclockwise)
Preceding gene: 118581641
Following gene: 118581632
Centisome position: 88.8
GC content: 63.22
Gene sequence:
>696_bases ATGGCCAGCCCGGGGCTGTCCATACTTGTTGTCTCCTACAGTGACGATATCAGGGACGCCCTGGTGGCCACGCTGAAAAG CTACGATGTCTCGGCGGTTGCCTGCTCAAGCTTCTGCGTCGCCGAAGAGCATGCCCTGCACGGCCTGCACAACGGGCTGC TGGTGGATCTGCCCTCCATGGTCAGGGCCAAGGGGGAGGAGAAGATCGTCGCCTGCACCCTGGCCAATTTCTATCCCACC CTGCGGGTGAAGGCGATTGGCAATGCCCTGATTCCCATGGCCATGCCGGGGAGCTCGAAGCAGGACAGGAGCCTGAACGA ATTTCTGACCAGAAGCTGTCCGACGTTTGTTCCGCGCGCGCTCCGTGCCCACCGCAGGCATGCCATCTGCGCCCTGACTC TGCTGGTCTACCGGGGAGAGGAACTGCGGGGGGTGACCCTTAACATCTCCTGGGGGGGCGCCTTTATCATGGATACCCAG GCCGAGCGCTTTCAGGCGGGAGAATCGGTGGAAGTCCGCTTTCCGCGCTATGGCGGCGCTGCCCGGGCGGTTATTCGCCG GGTGGTGCCCTGGGGGATGGATGATCCGCCCGGAATCGGTGTCAGCTTCCAGGAGATGGACCAGGATCTGGAAACGGCGC TGGCCGGTATCCTCAAGACCCGCAGGGAGTTCGACCGCGACAGGCTGGTTGCCTGA
Upstream 100 bases:
>100_bases ACCTCAAGTTCTTCGAGGGGCATACTCCGGCGGATATGACGCCGCTGATCGCCATTATCGGCAGGATCGGCATCAAGGTG CTGGAGGCAAAGTACTGACA
Downstream 100 bases:
>100_bases CCGCCCCGTGCGGGGTAGCGGGGAGCGGGCTCTGGCCTGTCTGCATCTCAGGCCGTGCGGCGCCTTCATCCCGCTGTCTG GCCACTGTTTGCTGAATCAA
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: PilZ Domain-Containing Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MASPGLSILVVSYSDDIRDALVATLKSYDVSAVACSSFCVAEEHALHGLHNGLLVDLPSMVRAKGEEKIVACTLANFYPT LRVKAIGNALIPMAMPGSSKQDRSLNEFLTRSCPTFVPRALRAHRRHAICALTLLVYRGEELRGVTLNISWGGAFIMDTQ AERFQAGESVEVRFPRYGGAARAVIRRVVPWGMDDPPGIGVSFQEMDQDLETALAGILKTRREFDRDRLVA
Sequences:
>Translated_231_residues MASPGLSILVVSYSDDIRDALVATLKSYDVSAVACSSFCVAEEHALHGLHNGLLVDLPSMVRAKGEEKIVACTLANFYPT LRVKAIGNALIPMAMPGSSKQDRSLNEFLTRSCPTFVPRALRAHRRHAICALTLLVYRGEELRGVTLNISWGGAFIMDTQ AERFQAGESVEVRFPRYGGAARAVIRRVVPWGMDDPPGIGVSFQEMDQDLETALAGILKTRREFDRDRLVA >Mature_230_residues ASPGLSILVVSYSDDIRDALVATLKSYDVSAVACSSFCVAEEHALHGLHNGLLVDLPSMVRAKGEEKIVACTLANFYPTL RVKAIGNALIPMAMPGSSKQDRSLNEFLTRSCPTFVPRALRAHRRHAICALTLLVYRGEELRGVTLNISWGGAFIMDTQA ERFQAGESVEVRFPRYGGAARAVIRRVVPWGMDDPPGIGVSFQEMDQDLETALAGILKTRREFDRDRLVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25320; Mature: 25188
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPGLSILVVSYSDDIRDALVATLKSYDVSAVACSSFCVAEEHALHGLHNGLLVDLPSM CCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHH VRAKGEEKIVACTLANFYPTLRVKAIGNALIPMAMPGSSKQDRSLNEFLTRSCPTFVPRA HHCCCCCEEEEEEECHHCCCEEEEECCCEECCEECCCCCCCCCHHHHHHHHCCCHHHHHH LRAHRRHAICALTLLVYRGEELRGVTLNISWGGAFIMDTQAERFQAGESVEVRFPRYGGA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHHCCCCCEEEEECCCCCH ARAVIRRVVPWGMDDPPGIGVSFQEMDQDLETALAGILKTRREFDRDRLVA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASPGLSILVVSYSDDIRDALVATLKSYDVSAVACSSFCVAEEHALHGLHNGLLVDLPSM CCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEEECHHH VRAKGEEKIVACTLANFYPTLRVKAIGNALIPMAMPGSSKQDRSLNEFLTRSCPTFVPRA HHCCCCCEEEEEEECHHCCCEEEEECCCEECCEECCCCCCCCCHHHHHHHHCCCHHHHHH LRAHRRHAICALTLLVYRGEELRGVTLNISWGGAFIMDTQAERFQAGESVEVRFPRYGGA HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCHHHHCCCCCEEEEECCCCCH ARAVIRRVVPWGMDDPPGIGVSFQEMDQDLETALAGILKTRREFDRDRLVA HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA