| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is 118581615
Identifier: 118581615
GI number: 118581615
Start: 3530269
End: 3531351
Strand: Direct
Name: 118581615
Synonym: Ppro_3214
Alternate gene names: NA
Gene position: 3530269-3531351 (Clockwise)
Preceding gene: 118581614
Following gene: 118581616
Centisome position: 88.08
GC content: 61.22
Gene sequence:
>1083_bases ATGGAACGAAGCAACAGAATAGGCTGGGCACAGGTGCGCGCCGGCGTCTTCATCTTCCTGGCGCTGCTGTTCATCGCAGG CGGCGTGCTGCTGATGGGGCAGAAGACCAAGATGTTCACCCCCAAGGGAAAGCTCAAGGTAATGATGGAGGACGTGGCCG GACTCAAGGACGGTGCGCCGGTCTGGCTGGCCGGGGTGGATGTGGGGGTTGTGACGGCGGTGGAGTTCGTCGACCCGGAA CGTTCCAACGAGGTGACCATCTTCATCGAGGCCGAACACGAGGCACTGCGCAAGATCGGCCCCGACTCCAGGATCACCAT CAAGACCCGGGGCCTGATGGGGGAGAAGTATGTTGACATCATCCCTTCCCGCTTCTACTCCACCACCCCGCCGCAAATCT TGCGCGGCGCCCCCACGGCAAAGCTGGACGACGTGGTGCAGAAGGCGGGAACCACCTTCGACCGGGTGAACACGATCGTG GACAGCATCACCCAGGGCAAGGGAACCTTGGGCAAACTGGCCAACGACCCGGCCCTGTACTCCAACATCGTCAAGCTGAC CAGCGAACTGAGCGAGCTGACCATCACCATCAACCGGGGCCAGGGAACCCTGGGCAGACTCAACCGAGACCCTGAACCGT ACAACCGTCTGGTCAGCATCCTGAACCGCGCCGACCAGACCCTGCAGGACATCCAGAAATCCGAGGGGACCCTGAACAAG CTGATCCACGATGAAACCCTCTACGCCAAGCTGGTGCTCTTGGCCGACACCAGCGTGCAGGCCGCCGGCGACGTGCGCGA ACTGAACCGCAAGCTCACCTCCCCGGAGGGGACCATCGGCATGCTGGTCAGCGATCGCGAGCTGTACGACAGGGGACTCT CCCTGATCAACCGCGCCGACAGCTCGATCAAGACCATCGAGGAGATCACCGGCCGCATCAACAACGGCAGCGGCACACTG GGCAAGACCATCAACGAGAAGGAACTCTACGAGCGGGTCAACCGCATGGTGGATTCCGTGGAGCTGCTGATTAAAGACAT CAAGCAGAACCCGGGCCGCTATGTGAAATTCTCGCTCTTCTAA
Upstream 100 bases:
>100_bases GGCCGAGATACGGGCCTGCGACATCGCGGAGGTGCGGGAATTCCTGGAGCCCACCGAGCAGTCGCTGTTCGCATGACACA AAAGAAGTACGGGATATGAT
Downstream 100 bases:
>100_bases CCGACAGCGTTACTCGAGGAAGCATCCATGCGTCTACTGATCGCCCTTTCAACCGCCCTCTGCCTGTTCACCGGCACGCT CCAGGCCGCGCCTCCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Mammalian Cell Entry Related Domain-Containing Protein; VpsC Protein; Mce Family Protein; Virulence Factor MCE-Like Protein-Related Protein; Virulence Factor Mce Family Protein; Mce-Related Protein; ABC Transporter Permease Component
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MERSNRIGWAQVRAGVFIFLALLFIAGGVLLMGQKTKMFTPKGKLKVMMEDVAGLKDGAPVWLAGVDVGVVTAVEFVDPE RSNEVTIFIEAEHEALRKIGPDSRITIKTRGLMGEKYVDIIPSRFYSTTPPQILRGAPTAKLDDVVQKAGTTFDRVNTIV DSITQGKGTLGKLANDPALYSNIVKLTSELSELTITINRGQGTLGRLNRDPEPYNRLVSILNRADQTLQDIQKSEGTLNK LIHDETLYAKLVLLADTSVQAAGDVRELNRKLTSPEGTIGMLVSDRELYDRGLSLINRADSSIKTIEEITGRINNGSGTL GKTINEKELYERVNRMVDSVELLIKDIKQNPGRYVKFSLF
Sequences:
>Translated_360_residues MERSNRIGWAQVRAGVFIFLALLFIAGGVLLMGQKTKMFTPKGKLKVMMEDVAGLKDGAPVWLAGVDVGVVTAVEFVDPE RSNEVTIFIEAEHEALRKIGPDSRITIKTRGLMGEKYVDIIPSRFYSTTPPQILRGAPTAKLDDVVQKAGTTFDRVNTIV DSITQGKGTLGKLANDPALYSNIVKLTSELSELTITINRGQGTLGRLNRDPEPYNRLVSILNRADQTLQDIQKSEGTLNK LIHDETLYAKLVLLADTSVQAAGDVRELNRKLTSPEGTIGMLVSDRELYDRGLSLINRADSSIKTIEEITGRINNGSGTL GKTINEKELYERVNRMVDSVELLIKDIKQNPGRYVKFSLF >Mature_360_residues MERSNRIGWAQVRAGVFIFLALLFIAGGVLLMGQKTKMFTPKGKLKVMMEDVAGLKDGAPVWLAGVDVGVVTAVEFVDPE RSNEVTIFIEAEHEALRKIGPDSRITIKTRGLMGEKYVDIIPSRFYSTTPPQILRGAPTAKLDDVVQKAGTTFDRVNTIV DSITQGKGTLGKLANDPALYSNIVKLTSELSELTITINRGQGTLGRLNRDPEPYNRLVSILNRADQTLQDIQKSEGTLNK LIHDETLYAKLVLLADTSVQAAGDVRELNRKLTSPEGTIGMLVSDRELYDRGLSLINRADSSIKTIEEITGRINNGSGTL GKTINEKELYERVNRMVDSVELLIKDIKQNPGRYVKFSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39734; Mature: 39734
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSNRIGWAQVRAGVFIFLALLFIAGGVLLMGQKTKMFTPKGKLKVMMEDVAGLKDGAP CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHHHHHHCCCCCCCC VWLAGVDVGVVTAVEFVDPERSNEVTIFIEAEHEALRKIGPDSRITIKTRGLMGEKYVDI EEEEECCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCCCCHHHHH IPSRFYSTTPPQILRGAPTAKLDDVVQKAGTTFDRVNTIVDSITQGKGTLGKLANDPALY HHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHH SNIVKLTSELSELTITINRGQGTLGRLNRDPEPYNRLVSILNRADQTLQDIQKSEGTLNK HHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH LIHDETLYAKLVLLADTSVQAAGDVRELNRKLTSPEGTIGMLVSDRELYDRGLSLINRAD HHHHHHHHHEEEEEECCCCHHCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCC SSIKTIEEITGRINNGSGTLGKTINEKELYERVNRMVDSVELLIKDIKQNPGRYVKFSLF HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure MERSNRIGWAQVRAGVFIFLALLFIAGGVLLMGQKTKMFTPKGKLKVMMEDVAGLKDGAP CCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCEECCCCHHHHHHHHHCCCCCCCC VWLAGVDVGVVTAVEFVDPERSNEVTIFIEAEHEALRKIGPDSRITIKTRGLMGEKYVDI EEEEECCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHCCCCCEEEEEECCCCCCHHHHH IPSRFYSTTPPQILRGAPTAKLDDVVQKAGTTFDRVNTIVDSITQGKGTLGKLANDPALY HHHHHCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCCHHHH SNIVKLTSELSELTITINRGQGTLGRLNRDPEPYNRLVSILNRADQTLQDIQKSEGTLNK HHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH LIHDETLYAKLVLLADTSVQAAGDVRELNRKLTSPEGTIGMLVSDRELYDRGLSLINRAD HHHHHHHHHEEEEEECCCCHHCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCC SSIKTIEEITGRINNGSGTLGKTINEKELYERVNRMVDSVELLIKDIKQNPGRYVKFSLF HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA