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The map label for this gene is trg [C]

Identifier: 118581548

GI number: 118581548

Start: 3450496

End: 3452118

Strand: Reverse

Name: trg [C]

Synonym: Ppro_3147

Alternate gene names: 118581548

Gene position: 3452118-3450496 (Counterclockwise)

Preceding gene: 118581549

Following gene: 118581539

Centisome position: 86.13

GC content: 61.98

Gene sequence:

>1623_bases
ATGTTCAACAATCTGAATGTGGGGACAAAGTTGTTGGCGGCATTCGTGCTCGTGGCCGTGATCAGCGGCGTCGTGGGCGT
CATCGGCATAACCAGGAACCGCCAGATCGCGGACGCTGACAAGAAGATGTACGAAAAACTCGCCGTTCCCCTGGGGGAAC
TGGCGGTCATAGCCGAATCGTTCCAGCGGGTTCGCATCAACCTGCGTGATGCAGTGGGCGCAACTGACGAGAATGAACGT
CGTAACGCCCTGCAGACGATTCAGAGGCTGAGCGGCACCATCGGTACTAATGTGGAGAGCTTTGAGAAGAGTATTTCCGA
CGAAGAACAGCGCAAGCTGTTCGAGCAGTTCAAGGATGCCCGGAAAGTCTATGTGGGGCACATCTCTACGATCATCAGGC
TTGACAACGAGAAGCGAGACGCCGAGGCCCTGGCGCTCATGCACGGCGAGGCCAAGCAGGCTGCCCTGCGTTATCAGGAA
TTGAGCGACAAACTGATTGAGAATATGCAGCAGCAGGGCAAGCTGCTGTCCGAACAGAACGAGAGGACGGCGAGCAACGC
CTTTATGCTCATGGTCTGTTTTGTCGCTGCCAACATCGTCATCGCCGTCCTGCTCGGCCTGTACATCAGCCGCATGATCA
CGACGCCGCTCAATGACGCGGTCCGGGTGGCCACGGCCATCGGGGCGGGAGATCTGAACGTGGACGTCCGAGTGACCTCA
GGGGATGAGACCGGCCGCCTGCTGCAGGCCATGAAGGTCATGGTCGATAACCTGCGCAACATCATCAACCAGGTATCAGG
GACCTCGTCCCAGGTTGCGGCGGCCTCCAGCCAGTTGCATGCCACCGCGGAGCAGATCGCCACCGGCGCCGAAGAGGTGG
CGGCCCAGGCCGGCACCGTTGCCACTGCTGGTGAAGAGATGTCAGCCACATCGGGCGATATCGCCCAGAACTGCCAGATG
GCGGCCGAGGGGGCGCAGCGCGCCTCGGCTTCGGCCCAGAACGGCGCGGAGGTGGTTGAAAAGACGGTGGTGGTGATGGG
ACAGATCGCCGCCAAGGTGCAGGAGTCTGCCAGGACCGTGGAGAGCCTGGGGGCGCGCAGCGACCAGATCGGCGCCATCA
TCGGCACCATCGAGGACATAGCCGACCAGACCAACCTGCTGGCGCTGAACGCGGCCATCGAAGCGGCCCGTGCAGGAGAG
CAGGGGCGGGGGTTCGCGGTGGTTGCCGACGAGGTGCGCGCCTTGGCGGAACGCACCACCCGCGCCACCCGCGAGATCGG
CGAGATGATCAAGGCCATCCAGGGAGAGACCAGGGATGCCGTGGCTGCCATGGAGCAAGGGGTGAGCCAGGTGGAGTCCG
GCACCATCGAGGCTGCCCGTTCCGGCGAGGCGCTACGGGATATCCTGGAGCAGGTCAACAACGTTGCCATGCAGGTCAAC
CAGATCGCCACTGCTGCCGAGGAACAGACCGCCACCACCGGTGAGATCGCCAGTAACATGCAGCAGATCACTGAAGTTGT
TCAGCAGACCTCGTGCGGCGCCCAGGAATCCGCTACCGCCGCGGCGCAGTTGAACAACAATGCCAGTGAGTTGCAGCGGC
TCGTACAGCAGTTCAGGTTGTAA

Upstream 100 bases:

>100_bases
TGCCTTAATGTGCAGGGAGCGGACAAAGTGATAGTCTCTGGTACAATGTGATGAAAATTACAGTCTGTTCACTAAAGGAC
TTAAAACAGGGGGGGAAGTC

Downstream 100 bases:

>100_bases
ACGTCAGGGGATCGGATGCTTGCCGCGGGCAACATCCGTTCCCCCCTTTTCTGATTGCATGTTGATGGAAAAACGGTTTG
TTTGGCGTGTGAAGAGGCAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MFNNLNVGTKLLAAFVLVAVISGVVGVIGITRNRQIADADKKMYEKLAVPLGELAVIAESFQRVRINLRDAVGATDENER
RNALQTIQRLSGTIGTNVESFEKSISDEEQRKLFEQFKDARKVYVGHISTIIRLDNEKRDAEALALMHGEAKQAALRYQE
LSDKLIENMQQQGKLLSEQNERTASNAFMLMVCFVAANIVIAVLLGLYISRMITTPLNDAVRVATAIGAGDLNVDVRVTS
GDETGRLLQAMKVMVDNLRNIINQVSGTSSQVAAASSQLHATAEQIATGAEEVAAQAGTVATAGEEMSATSGDIAQNCQM
AAEGAQRASASAQNGAEVVEKTVVVMGQIAAKVQESARTVESLGARSDQIGAIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTRATREIGEMIKAIQGETRDAVAAMEQGVSQVESGTIEAARSGEALRDILEQVNNVAMQVN
QIATAAEEQTATTGEIASNMQQITEVVQQTSCGAQESATAAAQLNNNASELQRLVQQFRL

Sequences:

>Translated_540_residues
MFNNLNVGTKLLAAFVLVAVISGVVGVIGITRNRQIADADKKMYEKLAVPLGELAVIAESFQRVRINLRDAVGATDENER
RNALQTIQRLSGTIGTNVESFEKSISDEEQRKLFEQFKDARKVYVGHISTIIRLDNEKRDAEALALMHGEAKQAALRYQE
LSDKLIENMQQQGKLLSEQNERTASNAFMLMVCFVAANIVIAVLLGLYISRMITTPLNDAVRVATAIGAGDLNVDVRVTS
GDETGRLLQAMKVMVDNLRNIINQVSGTSSQVAAASSQLHATAEQIATGAEEVAAQAGTVATAGEEMSATSGDIAQNCQM
AAEGAQRASASAQNGAEVVEKTVVVMGQIAAKVQESARTVESLGARSDQIGAIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTRATREIGEMIKAIQGETRDAVAAMEQGVSQVESGTIEAARSGEALRDILEQVNNVAMQVN
QIATAAEEQTATTGEIASNMQQITEVVQQTSCGAQESATAAAQLNNNASELQRLVQQFRL
>Mature_540_residues
MFNNLNVGTKLLAAFVLVAVISGVVGVIGITRNRQIADADKKMYEKLAVPLGELAVIAESFQRVRINLRDAVGATDENER
RNALQTIQRLSGTIGTNVESFEKSISDEEQRKLFEQFKDARKVYVGHISTIIRLDNEKRDAEALALMHGEAKQAALRYQE
LSDKLIENMQQQGKLLSEQNERTASNAFMLMVCFVAANIVIAVLLGLYISRMITTPLNDAVRVATAIGAGDLNVDVRVTS
GDETGRLLQAMKVMVDNLRNIINQVSGTSSQVAAASSQLHATAEQIATGAEEVAAQAGTVATAGEEMSATSGDIAQNCQM
AAEGAQRASASAQNGAEVVEKTVVVMGQIAAKVQESARTVESLGARSDQIGAIIGTIEDIADQTNLLALNAAIEAARAGE
QGRGFAVVADEVRALAERTTRATREIGEMIKAIQGETRDAVAAMEQGVSQVESGTIEAARSGEALRDILEQVNNVAMQVN
QIATAAEEQTATTGEIASNMQQITEVVQQTSCGAQESATAAAQLNNNASELQRLVQQFRL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=384, Percent_Identity=30.2083333333333, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI2367378, Length=365, Percent_Identity=32.0547945205479, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1788194, Length=371, Percent_Identity=32.6145552560647, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1788195, Length=340, Percent_Identity=36.1764705882353, Blast_Score=138, Evalue=8e-34,
Organism=Escherichia coli, GI1789453, Length=360, Percent_Identity=30.8333333333333, Blast_Score=121, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57529; Mature: 57529

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNLNVGTKLLAAFVLVAVISGVVGVIGITRNRQIADADKKMYEKLAVPLGELAVIAES
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
FQRVRINLRDAVGATDENERRNALQTIQRLSGTIGTNVESFEKSISDEEQRKLFEQFKDA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH
RKVYVGHISTIIRLDNEKRDAEALALMHGEAKQAALRYQELSDKLIENMQQQGKLLSEQN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERTASNAFMLMVCFVAANIVIAVLLGLYISRMITTPLNDAVRVATAIGAGDLNVDVRVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEC
GDETGRLLQAMKVMVDNLRNIINQVSGTSSQVAAASSQLHATAEQIATGAEEVAAQAGTV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCH
ATAGEEMSATSGDIAQNCQMAAEGAQRASASAQNGAEVVEKTVVVMGQIAAKVQESARTV
HCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLGARSDQIGAIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTT
HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH
RATREIGEMIKAIQGETRDAVAAMEQGVSQVESGTIEAARSGEALRDILEQVNNVAMQVN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHH
QIATAAEEQTATTGEIASNMQQITEVVQQTSCGAQESATAAAQLNNNASELQRLVQQFRL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFNNLNVGTKLLAAFVLVAVISGVVGVIGITRNRQIADADKKMYEKLAVPLGELAVIAES
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
FQRVRINLRDAVGATDENERRNALQTIQRLSGTIGTNVESFEKSISDEEQRKLFEQFKDA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHH
RKVYVGHISTIIRLDNEKRDAEALALMHGEAKQAALRYQELSDKLIENMQQQGKLLSEQN
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERTASNAFMLMVCFVAANIVIAVLLGLYISRMITTPLNDAVRVATAIGAGDLNVDVRVTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEC
GDETGRLLQAMKVMVDNLRNIINQVSGTSSQVAAASSQLHATAEQIATGAEEVAAQAGTV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCH
ATAGEEMSATSGDIAQNCQMAAEGAQRASASAQNGAEVVEKTVVVMGQIAAKVQESARTV
HCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLGARSDQIGAIIGTIEDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTT
HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH
RATREIGEMIKAIQGETRDAVAAMEQGVSQVESGTIEAARSGEALRDILEQVNNVAMQVN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHH
QIATAAEEQTATTGEIASNMQQITEVVQQTSCGAQESATAAAQLNNNASELQRLVQQFRL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA